RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 C12orf4Q9NQ89 552 aa5.61□□□□□ -1.51
CCDC47-205ENST00000582331 OR1A1Q9P1Q5 309 aa5.61□□□□□ -1.51
CCDC47-205ENST00000582331 FXYD6-FXYD2A0A087WZ82 144 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 TRBV6-6A0A0A6YYG2 114 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 RPS10-NUDT3A0A1W2PQS6 291 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 SRRM4A7MD48 611 aaKnown RBP5.6□□□□□ -1.51
CCDC47-205ENST00000582331 A8MWP6 167 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 H3BS24 57 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 ARPC5O15511 151 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 ACTL6BO94805 426 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 PGAM2P15259 253 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 RPA2P15927 270 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 FCGR2BP31994 310 aaPredicted RBP5.6□□□□□ -1.51
CCDC47-205ENST00000582331 ARL3P36405 182 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 MFAP2P55001 183 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 UCP3P55916 312 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 ARPC4P59998 168 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 TAGLNQ01995 201 aaKnown RBP5.6□□□□□ -1.51
CCDC47-205ENST00000582331 PRSS8Q16651 343 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 MLANAQ16655 118 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 VMA21Q3ZAQ7 101 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 ZNF585BQ52M93 769 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 TMEM177Q53S58 311 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 CLEC19AQ6UXS0 136 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 KCTD9Q7L273 389 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 MOB1BQ7L9L4 216 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 TTC9CQ8N5M4 171 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 TEX45Q8NA69 505 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.6□□□□□ -1.51
CCDC47-205ENST00000582331 MARC2Q969Z3 335 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 GALNT14Q96FL9 552 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 SEC22AQ96IW7 307 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 SPIN2AQ99865 258 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 SPAG8Q99932 426 aaPredicted RBP5.6□□□□□ -1.51
CCDC47-205ENST00000582331 RARRES2Q99969 163 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 SPIN2BQ9BPZ2 258 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 RNF126Q9BV68 326 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 Q9N2K0 584 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 PRR13Q9NZ81 148 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 MRPL27Q9P0M9 148 aaKnown RBP5.6□□□□□ -1.51
CCDC47-205ENST00000582331 TNFSF18Q9UNG2 199 aa5.6□□□□□ -1.51
CCDC47-205ENST00000582331 HSPG2P98160 4391 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 TRBV6-7A0A0A0MS04 114 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 LINC00862A6NCI5 91 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 CRYM-AS1A6NIL9 109 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 C11orf94C9JXX5 98 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 H0YIZ8 118 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 RTL8CO15255 209 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 ADAP1O75689 374 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 IFNA7P01567 189 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 IGHV3-23P01764 117 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 SCTP09683 121 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 C8orf88P0DMB2 117 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 RRASP10301 218 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 C4BPBP20851 252 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 S100A11P31949 105 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 FCGR2CP31995 323 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 UBE2KP61086 200 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 HLA-DRB3P79483 266 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 FGL1Q08830 312 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 RTL8BQ17RB0 113 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 LCE1DQ5T752 114 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 GSG1LQ6UXU4 331 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 KCNRGQ8N5I3 272 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 OR11H2Q8NH07 326 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 MOB3AQ96BX8 217 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 CSTL1Q9H114 145 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 C11orf68Q9H3H3 251 aaKnown RBP5.59□□□□□ -1.51
CCDC47-205ENST00000582331 RIMS4Q9H426 269 aaPredicted RBP5.59□□□□□ -1.51
CCDC47-205ENST00000582331 RDH8Q9NYR8 311 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 C14orf166Q9Y224 244 aaKnown RBP5.59□□□□□ -1.51
CCDC47-205ENST00000582331 ZNF257Q9Y2Q1 563 aa5.59□□□□□ -1.51
CCDC47-205ENST00000582331 IGKV1-6A0A0C4DH72 117 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 A0A0D9SG52 128 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 RNF222A6NCQ9 220 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 C5orf51A6NDU8 294 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 MPTX1A8MV57 137 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 TRDCB7Z8K6 153 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 TSPAN4O14817 238 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 B3GALNT1O75752 331 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 PSMB6P28072 239 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 ELLP55199 621 aaPredicted RBP5.58□□□□□ -1.52
CCDC47-205ENST00000582331 CYCSP99999 105 aaKnown RBP5.58□□□□□ -1.52
CCDC47-205ENST00000582331 OR2F1Q13607 317 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 TMEM187Q14656 261 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 IGSF11Q5DX21 431 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 CLLU1Q5K131 121 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 UNQ9165/PRO28630Q6UXU0 137 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 ZNF546Q86UE3 836 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 OR5B3Q8NH48 314 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 OR4A5Q8NH83 315 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 COQ8AQ8NI60 647 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 PPP1R1CQ8WVI7 109 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 EEF1AKMT3Q96AZ1 226 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 OR10C1Q96KK4 312 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 C2orf50Q96LR7 162 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 CCDC140Q96MF4 163 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 PDCD10Q9BUL8 212 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 NMES1Q9C002 83 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 ARL6Q9H0F7 186 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms