RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 OR1P1Q8NH06 330 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 OR2T6Q8NHC8 308 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 CFHR4Q92496 578 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 NRGNQ92686 78 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 TMEM167BQ9NRX6 74 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 APCP25054 2843 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 IGHV2-70DA0A0C4DH43 119 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 C1orf196B1AJZ1 125 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 NBR2O15453 112 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 OR5G3P0C626 314 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 PAX2Q02962 417 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 OR1L4Q8NGR5 311 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 TCRBV4S1A1TA0A5B7 111 aa18.11■□□□□ 0.49
CCDC47-204ENST00000582252 REG1AP05451 166 aa18.11■□□□□ 0.49
CCDC47-204ENST00000582252 RAB5AP20339 215 aa18.11■□□□□ 0.49
CCDC47-204ENST00000582252 ZFP36P26651 326 aaKnown RBP18.11■□□□□ 0.49
CCDC47-204ENST00000582252 PQLC2Q6ZP29 291 aa18.11■□□□□ 0.49
CCDC47-204ENST00000582252 SRSF12Q8WXF0 261 aaKnown RBP18.11■□□□□ 0.49
CCDC47-204ENST00000582252 PFDN5Q99471 154 aa18.11■□□□□ 0.49
CCDC47-204ENST00000582252 FNDC4Q9H6D8 234 aaPredicted RBP18.11■□□□□ 0.49
CCDC47-204ENST00000582252 HOXB4P17483 251 aaPredicted RBP18.1■□□□□ 0.49
CCDC47-204ENST00000582252 BPIFB3P59826 476 aa18.1■□□□□ 0.49
CCDC47-204ENST00000582252 LDLRAD2Q5SZI1 272 aa18.1■□□□□ 0.49
CCDC47-204ENST00000582252 SPATA31B1PQ5VZV4 182 aa18.1■□□□□ 0.49
CCDC47-204ENST00000582252 NPBQ8NG41 125 aa18.1■□□□□ 0.49
CCDC47-204ENST00000582252 OR2T10Q8NGZ9 312 aa18.1■□□□□ 0.49
CCDC47-204ENST00000582252 NPIPB3Q92617 1050 aa18.1■□□□□ 0.49
CCDC47-204ENST00000582252 MISP3Q96FF7 219 aa18.1■□□□□ 0.49
CCDC47-204ENST00000582252 SIRPDQ9H106 197 aa18.1■□□□□ 0.49
CCDC47-204ENST00000582252 F11RQ9Y624 299 aaKnown RBP18.1■□□□□ 0.49
CCDC47-204ENST00000582252 CLDN34H7C241 214 aa18.09■□□□□ 0.49
CCDC47-204ENST00000582252 FOXH1O75593 365 aa18.09■□□□□ 0.49
CCDC47-204ENST00000582252 NDUFA3O95167 84 aa18.09■□□□□ 0.49
CCDC47-204ENST00000582252 LCN2P80188 198 aa18.09■□□□□ 0.49
CCDC47-204ENST00000582252 ADIRFQ15847 76 aa18.09■□□□□ 0.49
CCDC47-204ENST00000582252 MALSU1Q96EH3 234 aa18.09■□□□□ 0.49
CCDC47-204ENST00000582252 BPESC1Q9GZL8 116 aa18.09■□□□□ 0.49
CCDC47-204ENST00000582252 TBL2Q9Y4P3 447 aaKnown RBP18.09■□□□□ 0.49
CCDC47-204ENST00000582252 TEX22C9J3V5 150 aa18.09■□□□□ 0.49
CCDC47-204ENST00000582252 NDUFS8O00217 210 aa18.09■□□□□ 0.49
CCDC47-204ENST00000582252 CNIH1O95406 144 aa18.09■□□□□ 0.49
CCDC47-204ENST00000582252 CRYGCP07315 174 aa18.09■□□□□ 0.49
CCDC47-204ENST00000582252 ATP5G3P48201 142 aa18.09■□□□□ 0.49
CCDC47-204ENST00000582252 CLEC2AQ6UVW9 174 aa18.09■□□□□ 0.49
CCDC47-204ENST00000582252 MIR17HGQ75NE6 70 aa18.09■□□□□ 0.49
CCDC47-204ENST00000582252 LHFPL4Q7Z7J7 247 aa18.09■□□□□ 0.49
CCDC47-204ENST00000582252 PERPQ96FX8 193 aa18.09■□□□□ 0.49
CCDC47-204ENST00000582252 UHRF2Q96PU4 802 aa18.09■□□□□ 0.49
CCDC47-204ENST00000582252 AREGP15514 252 aa18.08■□□□□ 0.48
CCDC47-204ENST00000582252 KRTAP10-9P60411 292 aa18.08■□□□□ 0.48
CCDC47-204ENST00000582252 OR1L6Q8NGR2 347 aa18.08■□□□□ 0.48
CCDC47-204ENST00000582252 FAM168AQ92567 244 aa18.08■□□□□ 0.48
CCDC47-204ENST00000582252 YPEL4Q96NS1 127 aa18.08■□□□□ 0.48
CCDC47-204ENST00000582252 PIMREGQ9BSJ6 248 aa18.08■□□□□ 0.48
CCDC47-204ENST00000582252 MED13LQ71F56 2210 aa18.08■□□□□ 0.48
CCDC47-204ENST00000582252 TOX4O94842 621 aa18.07■□□□□ 0.48
CCDC47-204ENST00000582252 RND2P52198 227 aa18.07■□□□□ 0.48
CCDC47-204ENST00000582252 HES1Q14469 280 aa18.07■□□□□ 0.48
CCDC47-204ENST00000582252 EAF1Q96JC9 268 aaPredicted RBP18.07■□□□□ 0.48
CCDC47-204ENST00000582252 DNAJC4Q9NNZ3 241 aa18.07■□□□□ 0.48
CCDC47-204ENST00000582252 WNK2Q9Y3S1 2297 aa18.07■□□□□ 0.48
CCDC47-204ENST00000582252 COX7A2P2O60397 106 aa18.06■□□□□ 0.48
CCDC47-204ENST00000582252 C8orf88P0DMB2 117 aa18.06■□□□□ 0.48
CCDC47-204ENST00000582252 GATA2P23769 480 aaPredicted RBP18.06■□□□□ 0.48
CCDC47-204ENST00000582252 LMO4P61968 165 aa18.06■□□□□ 0.48
CCDC47-204ENST00000582252 RPL23P62829 140 aaKnown RBP18.06■□□□□ 0.48
CCDC47-204ENST00000582252 SSX2Q16385 188 aa18.06■□□□□ 0.48
CCDC47-204ENST00000582252 DOK5Q9P104 306 aa18.06■□□□□ 0.48
CCDC47-204ENST00000582252 UNC79Q9P2D8 2635 aa18.06■□□□□ 0.48
CCDC47-204ENST00000582252 ASH1LQ9NR48 2969 aaKnown RBP18.06■□□□□ 0.48
CCDC47-204ENST00000582252 A0A1W2PRD5 423 aa18.06■□□□□ 0.48
CCDC47-204ENST00000582252 A0A1W2PRF3 423 aa18.06■□□□□ 0.48
CCDC47-204ENST00000582252 A0A1W2PRM7 423 aa18.06■□□□□ 0.48
CCDC47-204ENST00000582252 TRGV9Q99603 122 aa18.06■□□□□ 0.48
CCDC47-204ENST00000582252 BIN3Q9NQY0 253 aa18.06■□□□□ 0.48
CCDC47-204ENST00000582252 BEX4Q9NWD9 120 aaPredicted RBP18.06■□□□□ 0.48
CCDC47-204ENST00000582252 OR7C2O60412 319 aa18.05■□□□□ 0.48
CCDC47-204ENST00000582252 UBE2E1P51965 193 aa18.05■□□□□ 0.48
CCDC47-204ENST00000582252 DSCR9P59020 149 aa18.05■□□□□ 0.48
CCDC47-204ENST00000582252 ELOBQ15370 118 aa18.05■□□□□ 0.48
CCDC47-204ENST00000582252 TMEM116Q8NCL8 245 aa18.05■□□□□ 0.48
CCDC47-204ENST00000582252 C10orf105Q8TEF2 133 aa18.05■□□□□ 0.48
CCDC47-204ENST00000582252 ANAPC16Q96DE5 110 aa18.05■□□□□ 0.48
CCDC47-204ENST00000582252 SLC25A33Q9BSK2 321 aa18.05■□□□□ 0.48
CCDC47-204ENST00000582252 ARHGAP32A7KAX9 2087 aa18.04■□□□□ 0.48
CCDC47-204ENST00000582252 FCN1O00602 326 aa18.04■□□□□ 0.48
CCDC47-204ENST00000582252 C10orf113Q5VZT2 155 aa18.04■□□□□ 0.48
CCDC47-204ENST00000582252 LPAR2Q9HBW0 351 aa18.04■□□□□ 0.48
CCDC47-204ENST00000582252 TNFRSF19Q9NS68 423 aa18.04■□□□□ 0.48
CCDC47-204ENST00000582252 MAP1AP78559 2803 aaPredicted RBP18.04■□□□□ 0.48
CCDC47-204ENST00000582252 IGKV1D-37A0A075B6S9 117 aa18.03■□□□□ 0.48
CCDC47-204ENST00000582252 ELOA3CA0A087WX78 387 aaPredicted RBP18.03■□□□□ 0.48
CCDC47-204ENST00000582252 PSMB11A5LHX3 300 aa18.03■□□□□ 0.48
CCDC47-204ENST00000582252 NDUFB4O95168 129 aa18.03■□□□□ 0.48
CCDC47-204ENST00000582252 MFAP2P55001 183 aa18.03■□□□□ 0.48
CCDC47-204ENST00000582252 C5orf64Q2M2E5 130 aa18.03■□□□□ 0.48
CCDC47-204ENST00000582252 HIST2H2BCQ6DN03 193 aa18.03■□□□□ 0.48
CCDC47-204ENST00000582252 YTHDF2Q9Y5A9 579 aaKnown RBP18.03■□□□□ 0.48
CCDC47-204ENST00000582252 HECTD1Q9ULT8 2610 aa18.03■□□□□ 0.48
CCDC47-204ENST00000582252 CSMD2Q7Z408 3487 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms