RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 CMTM3Q96MX0 182 aa6.44□□□□□ -1.38
NUP85-217ENST00000581335 RARRES2Q99969 163 aa6.44□□□□□ -1.38
NUP85-217ENST00000581335 NXF2Q9GZY0 626 aaKnown RBP6.44□□□□□ -1.38
NUP85-217ENST00000581335 FRAS1Q86XX4 4008 aa6.43□□□□□ -1.38
NUP85-217ENST00000581335 IGKV3-7A0A075B6H7 116 aa6.43□□□□□ -1.38
NUP85-217ENST00000581335 NPIPB6E9PJ23 425 aa6.43□□□□□ -1.38
NUP85-217ENST00000581335 MT-CO2P00403 227 aa6.43□□□□□ -1.38
NUP85-217ENST00000581335 IGKV1-39P01597 117 aa6.43□□□□□ -1.38
NUP85-217ENST00000581335 IGKV1D-39P04432 117 aa6.43□□□□□ -1.38
NUP85-217ENST00000581335 HSPE1P61604 102 aaKnown RBP6.43□□□□□ -1.38
NUP85-217ENST00000581335 PAFAH1B2P68402 229 aa6.43□□□□□ -1.38
NUP85-217ENST00000581335 ERHP84090 104 aaKnown RBP6.43□□□□□ -1.38
NUP85-217ENST00000581335 PRCDQ00LT1 54 aa6.43□□□□□ -1.38
NUP85-217ENST00000581335 LGALS9CQ6DKI2 356 aa6.43□□□□□ -1.38
NUP85-217ENST00000581335 Q6ZSN1 163 aa6.43□□□□□ -1.38
NUP85-217ENST00000581335 H2BFWTQ7Z2G1 175 aa6.43□□□□□ -1.38
NUP85-217ENST00000581335 GPX8Q8TED1 209 aa6.43□□□□□ -1.38
NUP85-217ENST00000581335 YIPF6Q96EC8 236 aa6.43□□□□□ -1.38
NUP85-217ENST00000581335 KMT2AQ03164 3969 aa6.42□□□□□ -1.38
NUP85-217ENST00000581335 IGHV3OR16-13A0A075B7E8 117 aa6.42□□□□□ -1.38
NUP85-217ENST00000581335 IGHV3-74A0A0B4J1X5 117 aa6.42□□□□□ -1.38
NUP85-217ENST00000581335 SMIM31A0A1B0GVY4 71 aa6.42□□□□□ -1.38
NUP85-217ENST00000581335 GNG7O60262 68 aa6.42□□□□□ -1.38
NUP85-217ENST00000581335 IGHV3-48P01763 117 aa6.42□□□□□ -1.38
NUP85-217ENST00000581335 CD5P06127 495 aa6.42□□□□□ -1.38
NUP85-217ENST00000581335 EIF4EP06730 217 aaKnown RBP6.42□□□□□ -1.38
NUP85-217ENST00000581335 LSM3P62310 102 aaKnown RBP6.42□□□□□ -1.38
NUP85-217ENST00000581335 TOMM20LQ6UXN7 152 aa6.42□□□□□ -1.38
NUP85-217ENST00000581335 TCF24Q7RTU0 167 aa6.42□□□□□ -1.38
NUP85-217ENST00000581335 GBGT1Q8N5D6 347 aa6.42□□□□□ -1.38
NUP85-217ENST00000581335 RPP25LQ8N5L8 163 aaKnown RBP6.42□□□□□ -1.38
NUP85-217ENST00000581335 OR11H2Q8NH07 326 aa6.42□□□□□ -1.38
NUP85-217ENST00000581335 PINX1Q96BK5 328 aaKnown RBP6.42□□□□□ -1.38
NUP85-217ENST00000581335 GINS3Q9BRX5 216 aa6.42□□□□□ -1.38
NUP85-217ENST00000581335 VSIRQ9H7M9 311 aa6.42□□□□□ -1.38
NUP85-217ENST00000581335 SCPEP1Q9HB40 452 aa6.42□□□□□ -1.38
NUP85-217ENST00000581335 DIRC3C9JPN6 131 aa6.41□□□□□ -1.38
NUP85-217ENST00000581335 DNASE2O00115 360 aaPredicted RBP6.41□□□□□ -1.38
NUP85-217ENST00000581335 ST8SIA3O43173 380 aa6.41□□□□□ -1.38
NUP85-217ENST00000581335 DEDDO75618 318 aa6.41□□□□□ -1.38
NUP85-217ENST00000581335 DFFBO76075 338 aa6.41□□□□□ -1.38
NUP85-217ENST00000581335 TMEM50AO95807 157 aa6.41□□□□□ -1.38
NUP85-217ENST00000581335 APOA1P02647 267 aa6.41□□□□□ -1.38
NUP85-217ENST00000581335 APOHP02749 345 aaPredicted RBP6.41□□□□□ -1.38
NUP85-217ENST00000581335 NPBWR1P48145 328 aa6.41□□□□□ -1.38
NUP85-217ENST00000581335 NANOS2P60321 138 aaKnown RBP6.41□□□□□ -1.38
NUP85-217ENST00000581335 Q6ZRM9 215 aa6.41□□□□□ -1.38
NUP85-217ENST00000581335 Q8N3U1 123 aa6.41□□□□□ -1.38
NUP85-217ENST00000581335 DUSP18Q8NEJ0 188 aa6.41□□□□□ -1.38
NUP85-217ENST00000581335 C11orf45Q8TAV5 145 aa6.41□□□□□ -1.38
NUP85-217ENST00000581335 MRGPRFQ96AM1 343 aa6.41□□□□□ -1.38
NUP85-217ENST00000581335 MFFQ9GZY8 342 aa6.41□□□□□ -1.38
NUP85-217ENST00000581335 MS4A6AQ9H2W1 248 aa6.41□□□□□ -1.38
NUP85-217ENST00000581335 C11orf68Q9H3H3 251 aaKnown RBP6.41□□□□□ -1.38
NUP85-217ENST00000581335 COMMD3Q9UBI1 195 aa6.41□□□□□ -1.38
NUP85-217ENST00000581335 TRAV2A0A0B4J234 112 aa6.4□□□□□ -1.38
NUP85-217ENST00000581335 INS-IGF2F8WCM5 200 aa6.4□□□□□ -1.38
NUP85-217ENST00000581335 CA1P00915 261 aaPredicted RBP6.4□□□□□ -1.38
NUP85-217ENST00000581335 IFNA4P05014 189 aa6.4□□□□□ -1.38
NUP85-217ENST00000581335 RCVRNP35243 200 aa6.4□□□□□ -1.38
NUP85-217ENST00000581335 SNCAP37840 140 aa6.4□□□□□ -1.38
NUP85-217ENST00000581335 TIRAPP58753 221 aa6.4□□□□□ -1.38
NUP85-217ENST00000581335 DEFB131AP59861 70 aa6.4□□□□□ -1.38
NUP85-217ENST00000581335 RND3P61587 244 aa6.4□□□□□ -1.38
NUP85-217ENST00000581335 TMEM187Q14656 261 aa6.4□□□□□ -1.38
NUP85-217ENST00000581335 RBMS2Q15434 407 aaKnown RBP6.4□□□□□ -1.38
NUP85-217ENST00000581335 IZUMO4Q1ZYL8 232 aa6.4□□□□□ -1.38
NUP85-217ENST00000581335 ZNF600Q6ZNG1 722 aa6.4□□□□□ -1.38
NUP85-217ENST00000581335 SNX29P2Q8IUI4 249 aa6.4□□□□□ -1.38
NUP85-217ENST00000581335 FBXL17Q9UF56 701 aa6.4□□□□□ -1.38
NUP85-217ENST00000581335 PUS1Q9Y606 427 aaKnown RBP eCLIP6.4□□□□□ -1.38
NUP85-217ENST00000581335 A0A087WXM4 84 aa6.39□□□□□ -1.39
NUP85-217ENST00000581335 A0A0B4J293 547 aa6.39□□□□□ -1.39
NUP85-217ENST00000581335 IGHV3-66A0A0C4DH42 116 aa6.39□□□□□ -1.39
NUP85-217ENST00000581335 CORTO00230 105 aa6.39□□□□□ -1.39
NUP85-217ENST00000581335 IGKV1-5P01602 117 aa6.39□□□□□ -1.39
NUP85-217ENST00000581335 P0C879 139 aa6.39□□□□□ -1.39
NUP85-217ENST00000581335 ELK1P19419 428 aa6.39□□□□□ -1.39
NUP85-217ENST00000581335 NPPCP23582 126 aa6.39□□□□□ -1.39
NUP85-217ENST00000581335 SUB1P53999 127 aaKnown RBP eCLIP6.39□□□□□ -1.39
NUP85-217ENST00000581335 SPINK9Q5DT21 86 aa6.39□□□□□ -1.39
NUP85-217ENST00000581335 LEMD1Q68G75 181 aa6.39□□□□□ -1.39
NUP85-217ENST00000581335 PVRIGQ6DKI7 326 aa6.39□□□□□ -1.39
NUP85-217ENST00000581335 STHQ8IWL8 128 aa6.39□□□□□ -1.39
NUP85-217ENST00000581335 SLC35G3Q8N808 338 aa6.39□□□□□ -1.39
NUP85-217ENST00000581335 SYT8Q8NBV8 401 aa6.39□□□□□ -1.39
NUP85-217ENST00000581335 C2CD4CQ8TF44 421 aa6.39□□□□□ -1.39
NUP85-217ENST00000581335 ZNF486Q96H40 463 aaPredicted RBP6.39□□□□□ -1.39
NUP85-217ENST00000581335 TMEM231Q9H6L2 316 aa6.39□□□□□ -1.39
NUP85-217ENST00000581335 VCX3AQ9NNX9 186 aa6.39□□□□□ -1.39
NUP85-217ENST00000581335 A0A1B0GU03 582 aa6.38□□□□□ -1.39
NUP85-217ENST00000581335 A0A1W2PS18 150 aa6.38□□□□□ -1.39
NUP85-217ENST00000581335 DEFB4AO15263 64 aa6.38□□□□□ -1.39
NUP85-217ENST00000581335 HPGDSO60760 199 aa6.38□□□□□ -1.39
NUP85-217ENST00000581335 ATG12O94817 140 aa6.38□□□□□ -1.39
NUP85-217ENST00000581335 IFNA17P01571 189 aa6.38□□□□□ -1.39
NUP85-217ENST00000581335 RNASE2P10153 161 aaKnown RBP6.38□□□□□ -1.39
NUP85-217ENST00000581335 PGAM2P15259 253 aa6.38□□□□□ -1.39
NUP85-217ENST00000581335 ETV6P41212 452 aa6.38□□□□□ -1.39
NUP85-217ENST00000581335 PIGPP57054 158 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms