RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 C15orf61A6NNL5 157 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 CD24P25063 80 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 ADIRFQ15847 76 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 HLA-DRB5Q30154 266 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 GAB2Q9UQC2 676 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 HILPDAQ9Y5L2 63 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 IGHV3OR16-10A0A075B7F0 116 aa10.21□□□□□ -0.77
CDK5RAP3-217ENST00000580287 BUB1B-PAK6H3BSN5 160 aa10.21□□□□□ -0.77
CDK5RAP3-217ENST00000580287 IFNA1P01562 189 aa10.21□□□□□ -0.77
CDK5RAP3-217ENST00000580287 ZNF664Q8N3J9 261 aa10.21□□□□□ -0.77
CDK5RAP3-217ENST00000580287 OR51G1Q8NGK1 321 aa10.21□□□□□ -0.77
CDK5RAP3-217ENST00000580287 RNASEH2CQ8TDP1 164 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-217ENST00000580287 NEU1Q99519 415 aa10.21□□□□□ -0.77
CDK5RAP3-217ENST00000580287 SDF2L1Q9HCN8 221 aa10.21□□□□□ -0.77
CDK5RAP3-217ENST00000580287 CBY1Q9Y3M2 126 aa10.21□□□□□ -0.77
CDK5RAP3-217ENST00000580287 PDZD2O15018 2839 aa10.21□□□□□ -0.77
CDK5RAP3-217ENST00000580287 IGHV2-70DA0A0C4DH43 119 aa10.21□□□□□ -0.78
CDK5RAP3-217ENST00000580287 SERTM2A0A1B0GWG4 89 aa10.21□□□□□ -0.78
CDK5RAP3-217ENST00000580287 MBP02144 154 aa10.21□□□□□ -0.78
CDK5RAP3-217ENST00000580287 VDAC2P45880 294 aaPredicted RBP10.21□□□□□ -0.78
CDK5RAP3-217ENST00000580287 UBE2G2P60604 165 aa10.21□□□□□ -0.78
CDK5RAP3-217ENST00000580287 USF2Q15853 346 aaPredicted RBP10.21□□□□□ -0.78
CDK5RAP3-217ENST00000580287 TMEM30BQ3MIR4 351 aa10.21□□□□□ -0.78
CDK5RAP3-217ENST00000580287 OR52E5Q8NH55 327 aa10.21□□□□□ -0.78
CDK5RAP3-217ENST00000580287 SMIM7Q9BQ49 75 aa10.21□□□□□ -0.78
CDK5RAP3-217ENST00000580287 ACTR3CQ9C0K3 210 aaPredicted RBP10.21□□□□□ -0.78
CDK5RAP3-217ENST00000580287 OR51B2Q9Y5P1 312 aa10.21□□□□□ -0.78
CDK5RAP3-217ENST00000580287 TCAPO15273 167 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 ENSAO43768 121 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 PRTN3P24158 256 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 HSPE1P61604 102 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 PDLIM3Q53GG5 364 aaPredicted RBP10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 LINC00311Q8N616 119 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 RAB24Q969Q5 203 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 NOL4LQ96MY1 436 aaPredicted RBP10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 NABP2Q9BQ15 211 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 NDUFAF3Q9BU61 184 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 ELOVL1Q9BW60 279 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 VAX2Q9UIW0 290 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.2□□□□□ -0.783e-7■■■□□ 15.6
CDK5RAP3-217ENST00000580287 TLN2Q9Y4G6 2542 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 TEX15Q9BXT5 2789 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 CTXND1A0A1B0GTU2 59 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 H0YJW9 148 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 PRRX1P54821 245 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 OR1P1Q8NH06 330 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 OR4F5Q8NH21 305 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 ZNF596Q8TC21 504 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 OR4F4Q96R69 305 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 PAGE4O60829 102 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 TOX4O94842 621 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 APOA2P02652 100 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 NPY1RP25929 384 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 BMI1P35226 326 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 MEF2BQ02080 365 aaPredicted RBP10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 VWC2Q2TAL6 325 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 DEFB113Q30KQ7 82 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 ACOT6Q3I5F7 207 aaPredicted RBP10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 FBLN7Q53RD9 439 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 CENPVQ7Z7K6 275 aaPredicted RBP10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 SLC24A4Q8NFF2 622 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 TMEM186Q96B77 213 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 HARBI1Q96MB7 349 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 TBX15Q96SF7 602 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 SIRPDQ9H106 197 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 WDR83OSQ9Y284 106 aa10.2□□□□□ -0.78
CDK5RAP3-217ENST00000580287 CREBBPQ92793 2442 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 RNF223E7ERA6 249 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 M0R1W7 72 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 NDUFS8O00217 210 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 EREGO14944 169 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 CDC34P49427 236 aaPredicted RBP10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 PSMB3P49720 205 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 TREML4Q6UXN2 200 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 MOB3BQ86TA1 216 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 DYNAPQ8N1N2 210 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 TMEM170AQ8WVE7 144 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 SSMEM1Q8WWF3 244 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 CTDSP1Q9GZU7 261 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 SRD5A3Q9H8P0 318 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 PLEKHA3Q9HB20 300 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 TMEM14BQ9NUH8 114 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 FOXA2Q9Y261 457 aaPredicted RBP10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 INSIG2Q9Y5U4 225 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 A0A1W2PPV4 95 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 FOXH1O75593 365 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 CA2P00918 260 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 HOXB4P17483 251 aaPredicted RBP10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 CNTFRP26992 372 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 OR5AN1Q8NGI8 311 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 DERL1Q9BUN8 251 aa10.19□□□□□ -0.78
CDK5RAP3-217ENST00000580287 ZNF705GA8MUZ8 300 aaPredicted RBP10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 RBP4P02753 201 aa10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 SAA1P0DJI8 122 aaPredicted RBP10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 RAB4BP61018 213 aa10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 NUTF2P61970 127 aaKnown RBP10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 PRSS8Q16651 343 aa10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 MIC13Q5XKP0 118 aa10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 C8orf31Q8N9H6 132 aa10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 BEND2Q8NDZ0 799 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms