RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 DFFBO76075 338 aa9.38□□□□□ -0.91
CDK5RAP3-213ENST00000579605 CTSGP08311 255 aa9.38□□□□□ -0.91
CDK5RAP3-213ENST00000579605 SPP1P10451 314 aa9.38□□□□□ -0.91
CDK5RAP3-213ENST00000579605 NAT1P18440 290 aa9.38□□□□□ -0.91
CDK5RAP3-213ENST00000579605 MFAP4P55083 255 aa9.38□□□□□ -0.91
CDK5RAP3-213ENST00000579605 PHLDA2Q53GA4 152 aa9.38□□□□□ -0.91
CDK5RAP3-213ENST00000579605 Q5VSD8 79 aa9.38□□□□□ -0.91
CDK5RAP3-213ENST00000579605 SLC25A46Q96AG3 418 aa9.38□□□□□ -0.91
CDK5RAP3-213ENST00000579605 ATG101Q9BSB4 218 aa9.38□□□□□ -0.91
CDK5RAP3-213ENST00000579605 RABAC1Q9UI14 185 aa9.38□□□□□ -0.91
CDK5RAP3-213ENST00000579605 VPS13BQ7Z7G8 4022 aa9.38□□□□□ -0.91
CDK5RAP3-213ENST00000579605 TRAV14DV4A0A0A6YYC5 116 aa9.37□□□□□ -0.91
CDK5RAP3-213ENST00000579605 DBX1A6NMT0 343 aa9.37□□□□□ -0.91
CDK5RAP3-213ENST00000579605 SPART-AS1P0CW21 52 aa9.37□□□□□ -0.91
CDK5RAP3-213ENST00000579605 HLA-DMAP28067 261 aa9.37□□□□□ -0.91
CDK5RAP3-213ENST00000579605 PRSS3P35030 304 aa9.37□□□□□ -0.91
CDK5RAP3-213ENST00000579605 TSPAN5P62079 268 aa9.37□□□□□ -0.91
CDK5RAP3-213ENST00000579605 LPCAT3Q6P1A2 487 aa9.37□□□□□ -0.91
CDK5RAP3-213ENST00000579605 LILRB2Q8N423 598 aa9.37□□□□□ -0.91
CDK5RAP3-213ENST00000579605 SAMD12Q8N8I0 201 aa9.37□□□□□ -0.91
CDK5RAP3-213ENST00000579605 CSNK1G2-AS1Q8NCQ2 148 aa9.37□□□□□ -0.91
CDK5RAP3-213ENST00000579605 OR4A16Q8NH70 328 aa9.37□□□□□ -0.91
CDK5RAP3-213ENST00000579605 FAM210BQ96KR6 192 aa9.37□□□□□ -0.91
CDK5RAP3-213ENST00000579605 TXN2Q99757 166 aa9.37□□□□□ -0.91
CDK5RAP3-213ENST00000579605 SRRM2Q9UQ35 2752 aaKnown RBP9.37□□□□□ -0.91
CDK5RAP3-213ENST00000579605 I3L2K1 104 aa9.36□□□□□ -0.91
CDK5RAP3-213ENST00000579605 ST8SIA3O43173 380 aa9.36□□□□□ -0.91
CDK5RAP3-213ENST00000579605 EIF4EP06730 217 aaKnown RBP9.36□□□□□ -0.91
CDK5RAP3-213ENST00000579605 HRH1P35367 487 aa9.36□□□□□ -0.91
CDK5RAP3-213ENST00000579605 TGFBR1P36897 503 aa9.36□□□□□ -0.91
CDK5RAP3-213ENST00000579605 KCTD21Q4G0X4 260 aa9.36□□□□□ -0.91
CDK5RAP3-213ENST00000579605 ACTL10Q5JWF8 245 aa9.36□□□□□ -0.91
CDK5RAP3-213ENST00000579605 H2BFWTQ7Z2G1 175 aa9.36□□□□□ -0.91
CDK5RAP3-213ENST00000579605 FRZBQ92765 325 aa9.36□□□□□ -0.91
CDK5RAP3-213ENST00000579605 OR10C1Q96KK4 312 aa9.36□□□□□ -0.91
CDK5RAP3-213ENST00000579605 FAM212BQ9NTI7 297 aaPredicted RBP9.36□□□□□ -0.91
CDK5RAP3-213ENST00000579605 GNG7O60262 68 aa9.35□□□□□ -0.91
CDK5RAP3-213ENST00000579605 MT-CO2P00403 227 aa9.35□□□□□ -0.91
CDK5RAP3-213ENST00000579605 IGHV3-48P01763 117 aa9.35□□□□□ -0.91
CDK5RAP3-213ENST00000579605 APOHP02749 345 aaPredicted RBP9.35□□□□□ -0.91
CDK5RAP3-213ENST00000579605 RPS19P39019 145 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-213ENST00000579605 LSM3P62310 102 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-213ENST00000579605 ERHP84090 104 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-213ENST00000579605 TMEM88Q6PEY1 159 aa9.35□□□□□ -0.91
CDK5RAP3-213ENST00000579605 TBC1D26Q86UD7 250 aa9.35□□□□□ -0.91
CDK5RAP3-213ENST00000579605 LYSMD2Q8IV50 215 aa9.35□□□□□ -0.91
CDK5RAP3-213ENST00000579605 LYPD1Q8N2G4 141 aa9.35□□□□□ -0.91
CDK5RAP3-213ENST00000579605 ST8SIA2Q92186 375 aa9.35□□□□□ -0.91
CDK5RAP3-213ENST00000579605 PINX1Q96BK5 328 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-213ENST00000579605 ZNF414Q96IQ9 312 aa9.35□□□□□ -0.91
CDK5RAP3-213ENST00000579605 NXF2Q9GZY0 626 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-213ENST00000579605 MDFICQ9P1T7 246 aa9.35□□□□□ -0.91
CDK5RAP3-213ENST00000579605 SMIM31A0A1B0GVY4 71 aa9.34□□□□□ -0.91
CDK5RAP3-213ENST00000579605 HSPE1P61604 102 aaKnown RBP9.34□□□□□ -0.91
CDK5RAP3-213ENST00000579605 PRCDQ00LT1 54 aa9.34□□□□□ -0.91
CDK5RAP3-213ENST00000579605 ZNF114Q8NC26 417 aa9.34□□□□□ -0.91
CDK5RAP3-213ENST00000579605 DUSP18Q8NEJ0 188 aa9.34□□□□□ -0.91
CDK5RAP3-213ENST00000579605 GPX8Q8TED1 209 aa9.34□□□□□ -0.91
CDK5RAP3-213ENST00000579605 SEC22AQ96IW7 307 aa9.34□□□□□ -0.91
CDK5RAP3-213ENST00000579605 GINS3Q9BRX5 216 aa9.34□□□□□ -0.91
CDK5RAP3-213ENST00000579605 XCL2Q9UBD3 114 aa9.34□□□□□ -0.91
CDK5RAP3-213ENST00000579605 CD5P06127 495 aa9.33□□□□□ -0.92
CDK5RAP3-213ENST00000579605 ZNF688P0C7X2 276 aa9.33□□□□□ -0.92
CDK5RAP3-213ENST00000579605 NPBWR1P48145 328 aa9.33□□□□□ -0.92
CDK5RAP3-213ENST00000579605 DLK1P80370 383 aa9.33□□□□□ -0.92
CDK5RAP3-213ENST00000579605 MRGPRFQ96AM1 343 aa9.33□□□□□ -0.92
CDK5RAP3-213ENST00000579605 FLG2Q5D862 2391 aaPredicted RBP9.32□□□□□ -0.92
CDK5RAP3-213ENST00000579605 IGKV1-39P01597 117 aa9.32□□□□□ -0.92
CDK5RAP3-213ENST00000579605 IGKV1D-39P04432 117 aa9.32□□□□□ -0.92
CDK5RAP3-213ENST00000579605 RCVRNP35243 200 aa9.32□□□□□ -0.92
CDK5RAP3-213ENST00000579605 FUSP35637 526 aaKnown RBP eCLIP9.32□□□□□ -0.92
CDK5RAP3-213ENST00000579605 UCP3P55916 312 aa9.32□□□□□ -0.92
CDK5RAP3-213ENST00000579605 FAM3BP58499 235 aaPredicted RBP9.32□□□□□ -0.92
CDK5RAP3-213ENST00000579605 SPINK9Q5DT21 86 aa9.32□□□□□ -0.92
CDK5RAP3-213ENST00000579605 TOMM20LQ6UXN7 152 aa9.32□□□□□ -0.92
CDK5RAP3-213ENST00000579605 SNX29P2Q8IUI4 249 aa9.32□□□□□ -0.92
CDK5RAP3-213ENST00000579605 STXBP6Q8NFX7 210 aa9.32□□□□□ -0.92
CDK5RAP3-213ENST00000579605 YIPF6Q96EC8 236 aa9.32□□□□□ -0.92
CDK5RAP3-213ENST00000579605 NIPSNAP3BQ9BS92 247 aa9.32□□□□□ -0.92
CDK5RAP3-213ENST00000579605 SCPEP1Q9HB40 452 aa9.32□□□□□ -0.92
CDK5RAP3-213ENST00000579605 VCX3AQ9NNX9 186 aa9.32□□□□□ -0.92
CDK5RAP3-213ENST00000579605 COMMD3Q9UBI1 195 aa9.32□□□□□ -0.92
CDK5RAP3-213ENST00000579605 IGHV3OR16-12A0A075B7B8 117 aa9.31□□□□□ -0.92
CDK5RAP3-213ENST00000579605 APOA1P02647 267 aa9.31□□□□□ -0.92
CDK5RAP3-213ENST00000579605 SMR3BP02814 79 aaPredicted RBP9.31□□□□□ -0.92
CDK5RAP3-213ENST00000579605 PGAM2P15259 253 aa9.31□□□□□ -0.92
CDK5RAP3-213ENST00000579605 SNCAP37840 140 aa9.31□□□□□ -0.92
CDK5RAP3-213ENST00000579605 XGP55808 180 aa9.31□□□□□ -0.92
CDK5RAP3-213ENST00000579605 FAM222AQ5U5X8 452 aa9.31□□□□□ -0.92
CDK5RAP3-213ENST00000579605 ZNF600Q6ZNG1 722 aa9.31□□□□□ -0.92
CDK5RAP3-213ENST00000579605 SLC35G3Q8N808 338 aa9.31□□□□□ -0.92
CDK5RAP3-213ENST00000579605 ZNRF2Q8NHG8 242 aa9.31□□□□□ -0.92
CDK5RAP3-213ENST00000579605 TMEM231Q9H6L2 316 aa9.31□□□□□ -0.92
CDK5RAP3-213ENST00000579605 VSIRQ9H7M9 311 aa9.31□□□□□ -0.92
CDK5RAP3-213ENST00000579605 PUS1Q9Y606 427 aaKnown RBP eCLIP9.31□□□□□ -0.92
CDK5RAP3-213ENST00000579605 NACAE9PAV3 2078 aa9.31□□□□□ -0.92
CDK5RAP3-213ENST00000579605 HMCN2Q8NDA2 5059 aa9.31□□□□□ -0.92
CDK5RAP3-213ENST00000579605 TRAV2A0A0B4J234 112 aa9.3□□□□□ -0.92
CDK5RAP3-213ENST00000579605 SUB1P53999 127 aaKnown RBP eCLIP9.3□□□□□ -0.92
CDK5RAP3-213ENST00000579605 IZUMO4Q1ZYL8 232 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms