RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 LOC100506127A0A0U1RQW1 187 aa6.16□□□□□ -1.42
CASC3-206ENST00000579238 INS-IGF2F8WCM5 200 aa6.16□□□□□ -1.42
CASC3-206ENST00000579238 CORTO00230 105 aa6.16□□□□□ -1.42
CASC3-206ENST00000579238 CRYBB3P26998 211 aa6.16□□□□□ -1.42
CASC3-206ENST00000579238 HRH1P35367 487 aa6.16□□□□□ -1.42
CASC3-206ENST00000579238 SNCAP37840 140 aa6.16□□□□□ -1.42
CASC3-206ENST00000579238 P2RY1P47900 373 aa6.16□□□□□ -1.42
CASC3-206ENST00000579238 TAS2R20P59543 309 aa6.16□□□□□ -1.42
CASC3-206ENST00000579238 LGALS9BQ3B8N2 356 aa6.16□□□□□ -1.42
CASC3-206ENST00000579238 ACTL10Q5JWF8 245 aa6.16□□□□□ -1.42
CASC3-206ENST00000579238 TMEM69Q5SWH9 247 aa6.16□□□□□ -1.42
CASC3-206ENST00000579238 DCANP1Q8TF63 244 aa6.16□□□□□ -1.42
CASC3-206ENST00000579238 MRGPRFQ96AM1 343 aa6.16□□□□□ -1.42
CASC3-206ENST00000579238 NARS2Q96I59 477 aaKnown RBP6.16□□□□□ -1.42
CASC3-206ENST00000579238 NDUFAF3Q9BU61 184 aa6.16□□□□□ -1.42
CASC3-206ENST00000579238 CLEC5AQ9NY25 188 aa6.16□□□□□ -1.42
CASC3-206ENST00000579238 M0R2N4 97 aa6.15□□□□□ -1.42
CASC3-206ENST00000579238 CLN5O75503 358 aa6.15□□□□□ -1.42
CASC3-206ENST00000579238 SCGB2A1O75556 95 aa6.15□□□□□ -1.42
CASC3-206ENST00000579238 NPY1RP25929 384 aa6.15□□□□□ -1.42
CASC3-206ENST00000579238 PRSS3P35030 304 aa6.15□□□□□ -1.42
CASC3-206ENST00000579238 EIF2B2P49770 351 aaKnown RBP6.15□□□□□ -1.42
CASC3-206ENST00000579238 SUB1P53999 127 aaKnown RBP eCLIP6.15□□□□□ -1.42
CASC3-206ENST00000579238 UCP3P55916 312 aa6.15□□□□□ -1.42
CASC3-206ENST00000579238 TSPAN5P62079 268 aa6.15□□□□□ -1.42
CASC3-206ENST00000579238 SPINK9Q5DT21 86 aa6.15□□□□□ -1.42
CASC3-206ENST00000579238 UBE2NLQ5JXB2 153 aa6.15□□□□□ -1.42
CASC3-206ENST00000579238 ZNF767PQ75MW2 155 aa6.15□□□□□ -1.42
CASC3-206ENST00000579238 LYSMD2Q8IV50 215 aa6.15□□□□□ -1.42
CASC3-206ENST00000579238 CROCCP3Q8IVE0 287 aa6.15□□□□□ -1.42
CASC3-206ENST00000579238 SLC35G3Q8N808 338 aa6.15□□□□□ -1.42
CASC3-206ENST00000579238 OR4X1Q8NH49 305 aa6.15□□□□□ -1.42
CASC3-206ENST00000579238 RAB40CQ96S21 281 aa6.15□□□□□ -1.42
CASC3-206ENST00000579238 YTHDF1Q9BYJ9 559 aaKnown RBP6.15□□□□□ -1.42
CASC3-206ENST00000579238 HELTA6NFD8 242 aa6.14□□□□□ -1.43
CASC3-206ENST00000579238 IFNA17P01571 189 aa6.14□□□□□ -1.43
CASC3-206ENST00000579238 RNASE2P10153 161 aaKnown RBP6.14□□□□□ -1.43
CASC3-206ENST00000579238 HLA-DMAP28067 261 aa6.14□□□□□ -1.43
CASC3-206ENST00000579238 OPRK1P41145 380 aa6.14□□□□□ -1.43
CASC3-206ENST00000579238 RPL5P46777 297 aaKnown RBP6.14□□□□□ -1.43
CASC3-206ENST00000579238 PPP5CP53041 499 aa6.14□□□□□ -1.43
CASC3-206ENST00000579238 NUTF2P61970 127 aaKnown RBP6.14□□□□□ -1.43
CASC3-206ENST00000579238 DHRS2Q13268 280 aa6.14□□□□□ -1.43
CASC3-206ENST00000579238 IZUMO4Q1ZYL8 232 aa6.14□□□□□ -1.43
CASC3-206ENST00000579238 TMEM230Q96A57 120 aa6.14□□□□□ -1.43
CASC3-206ENST00000579238 C1QTNF4Q9BXJ3 329 aa6.14□□□□□ -1.43
CASC3-206ENST00000579238 FNDC4Q9H6D8 234 aaPredicted RBP6.14□□□□□ -1.43
CASC3-206ENST00000579238 MRPL36Q9P0J6 103 aaKnown RBP6.14□□□□□ -1.43
CASC3-206ENST00000579238 U3KQE9 123 aa6.14□□□□□ -1.43
CASC3-206ENST00000579238 TRAV30A0A087WSZ9 112 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 A0A0B4J293 547 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 IFNA10P01566 189 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 IGKV1-17P01599 117 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 IGKV1-5P01602 117 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 P0C879 139 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 HOXA1P49639 335 aaPredicted RBP6.13□□□□□ -1.43
CASC3-206ENST00000579238 AP2S1P53680 142 aaPredicted RBP6.13□□□□□ -1.43
CASC3-206ENST00000579238 RND3P61587 244 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 SNRPD3P62318 126 aaKnown RBP6.13□□□□□ -1.43
CASC3-206ENST00000579238 MLANAQ16655 118 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 PSMG4Q5JS54 123 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 C16orf54Q6UWD8 224 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 SAMD12Q8N8I0 201 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 GPX8Q8TED1 209 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 GLMPQ8WWB7 406 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 FAM210BQ96KR6 192 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 PDCD10Q9BUL8 212 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 SCRT1Q9BWW7 348 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 SEPSECSQ9HD40 501 aaKnown RBP6.13□□□□□ -1.43
CASC3-206ENST00000579238 ENY2Q9NPA8 101 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 XCL2Q9UBD3 114 aa6.13□□□□□ -1.43
CASC3-206ENST00000579238 PKD1P98161 4303 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 TMEM189A5PLL7 270 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 H3BMM0 161 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 ATG12O94817 140 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 IFNA21P01568 189 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 CD74P04233 296 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 HNRNPCP07910 306 aaKnown RBP eCLIP6.12□□□□□ -1.43
CASC3-206ENST00000579238 SPART-AS1P0CW21 52 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 RCVRNP35243 200 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 ETV6P41212 452 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 AKR1C2P52895 323 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 HSPG2P98160 4391 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 BSXQ3C1V8 233 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 TIGITQ495A1 244 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 SOHLH1Q5JUK2 328 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 Q6ZR54 194 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 UBE2DNLQ8IWF7 75 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 OR1S2Q8NGQ3 325 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 ZNF486Q96H40 463 aaPredicted RBP6.12□□□□□ -1.43
CASC3-206ENST00000579238 NEU1Q99519 415 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 KRTAP4-5Q9BYR2 181 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 Q9H521 79 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 SCPEP1Q9HB40 452 aa6.12□□□□□ -1.43
CASC3-206ENST00000579238 IGLV2-18A0A075B6J9 118 aa6.11□□□□□ -1.43
CASC3-206ENST00000579238 RPS10-NUDT3A0A1W2PQS6 291 aa6.11□□□□□ -1.43
CASC3-206ENST00000579238 SMIM9A6NGZ8 99 aa6.11□□□□□ -1.43
CASC3-206ENST00000579238 ZNF705FA8MVS1 300 aaPredicted RBP6.11□□□□□ -1.43
CASC3-206ENST00000579238 FAM90A26D6RGX4 464 aa6.11□□□□□ -1.43
CASC3-206ENST00000579238 IGLC1P0CG04 106 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms