RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 F8W735 103 aaPredicted RBP13.21□□□□□ -0.29
ITGB4-205ENST00000579211 SCAF4O95104 1147 aaKnown RBP13.21□□□□□ -0.29
ITGB4-205ENST00000579211 HOXB5P09067 269 aa13.21□□□□□ -0.29
ITGB4-205ENST00000579211 IGHV4-30-4P0DP06 118 aa13.21□□□□□ -0.29
ITGB4-205ENST00000579211 TNFRSF9Q07011 255 aa13.21□□□□□ -0.29
ITGB4-205ENST00000579211 CNPY1Q3B7I2 92 aa13.21□□□□□ -0.29
ITGB4-205ENST00000579211 ANKRD55Q3KP44 614 aa13.21□□□□□ -0.29
ITGB4-205ENST00000579211 LAMTOR1Q6IAA8 161 aa13.21□□□□□ -0.29
ITGB4-205ENST00000579211 Q8N1Y9 231 aa13.21□□□□□ -0.29
ITGB4-205ENST00000579211 S100ZQ8WXG8 99 aa13.21□□□□□ -0.29
ITGB4-205ENST00000579211 NEURL2Q9BR09 285 aa13.21□□□□□ -0.29
ITGB4-205ENST00000579211 RBKSQ9H477 322 aa13.21□□□□□ -0.29
ITGB4-205ENST00000579211 C15orf62A8K5M9 175 aa13.2□□□□□ -0.3
ITGB4-205ENST00000579211 ZNF785A8K8V0 405 aa13.2□□□□□ -0.3
ITGB4-205ENST00000579211 K7EMT4 169 aa13.2□□□□□ -0.3
ITGB4-205ENST00000579211 NPY1RP25929 384 aa13.2□□□□□ -0.3
ITGB4-205ENST00000579211 C4orf46Q504U0 113 aa13.2□□□□□ -0.3
ITGB4-205ENST00000579211 C2orf83Q53S99 150 aa13.2□□□□□ -0.3
ITGB4-205ENST00000579211 ETFRF1Q6IPR1 90 aa13.2□□□□□ -0.3
ITGB4-205ENST00000579211 C11orf87Q6NUJ2 197 aa13.2□□□□□ -0.3
ITGB4-205ENST00000579211 SLC16A13Q7RTY0 426 aa13.2□□□□□ -0.3
ITGB4-205ENST00000579211 LRTM2Q8N967 370 aa13.2□□□□□ -0.3
ITGB4-205ENST00000579211 OR52B4Q8NGK2 314 aa13.2□□□□□ -0.3
ITGB4-205ENST00000579211 DTD1Q8TEA8 209 aa13.2□□□□□ -0.3
ITGB4-205ENST00000579211 GINS3Q9BRX5 216 aa13.2□□□□□ -0.3
ITGB4-205ENST00000579211 HSPB7Q9UBY9 170 aa13.2□□□□□ -0.3
ITGB4-205ENST00000579211 FLVCR2Q9UPI3 526 aa13.2□□□□□ -0.3
ITGB4-205ENST00000579211 TMED3Q9Y3Q3 217 aa13.2□□□□□ -0.3
ITGB4-205ENST00000579211 MED6O75586 246 aa13.19□□□□□ -0.3
ITGB4-205ENST00000579211 TMEM50AO95807 157 aa13.19□□□□□ -0.3
ITGB4-205ENST00000579211 C8orf88P0DMB2 117 aa13.19□□□□□ -0.3
ITGB4-205ENST00000579211 TMEM61Q8N0U2 210 aa13.19□□□□□ -0.3
ITGB4-205ENST00000579211 COQ8AQ8NI60 647 aa13.19□□□□□ -0.3
ITGB4-205ENST00000579211 RNASEH2CQ8TDP1 164 aaKnown RBP13.19□□□□□ -0.3
ITGB4-205ENST00000579211 ZMAT4Q9H898 229 aa13.19□□□□□ -0.3
ITGB4-205ENST00000579211 U3KQ87 197 aa13.19□□□□□ -0.3
ITGB4-205ENST00000579211 TRAV30A0A087WSZ9 112 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 TRAV14DV4A0A0A6YYC5 116 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 TRAV25A0A0B4J276 109 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 C9orf170A2RU37 121 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 A6NHS1 94 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 LYRM1O43325 122 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 CLN5O75503 358 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 IFNA21P01568 189 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 OR4E1P0C645 316 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 MLANAQ16655 118 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 BSXQ3C1V8 233 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 PVRIGQ6DKI7 326 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 ZNF600Q6ZNG1 722 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 LINC00299Q6ZSB3 139 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 SBSPONQ8IVN8 264 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 TMEM116Q8NCL8 245 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 CCDC32Q9BV29 185 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 PAIP2BQ9ULR5 123 aaKnown RBP13.18□□□□□ -0.3
ITGB4-205ENST00000579211 U3KQK5 164 aa13.18□□□□□ -0.3
ITGB4-205ENST00000579211 IFNA4P05014 189 aa13.17□□□□□ -0.3
ITGB4-205ENST00000579211 CD7P09564 240 aa13.17□□□□□ -0.3
ITGB4-205ENST00000579211 SLC25A4P12235 298 aa13.17□□□□□ -0.3
ITGB4-205ENST00000579211 SLC25A6P12236 298 aa13.17□□□□□ -0.3
ITGB4-205ENST00000579211 BMI1P35226 326 aa13.17□□□□□ -0.3
ITGB4-205ENST00000579211 OR4X1Q8NH49 305 aa13.17□□□□□ -0.3
ITGB4-205ENST00000579211 FNDC4Q9H6D8 234 aaPredicted RBP13.17□□□□□ -0.3
ITGB4-205ENST00000579211 IGHV3-49A0A0A0MS15 119 aa13.16□□□□□ -0.3
ITGB4-205ENST00000579211 IGHV7-4-1A0A0J9YVY3 117 aa13.16□□□□□ -0.3
ITGB4-205ENST00000579211 OR11H12B2RN74 326 aa13.16□□□□□ -0.3
ITGB4-205ENST00000579211 ANXA7P20073 488 aaKnown RBP13.16□□□□□ -0.3
ITGB4-205ENST00000579211 RPP30P78346 268 aaKnown RBP13.16□□□□□ -0.3
ITGB4-205ENST00000579211 GGNBP1Q5YKI7 109 aa13.16□□□□□ -0.3
ITGB4-205ENST00000579211 TOMM20LQ6UXN7 152 aa13.16□□□□□ -0.3
ITGB4-205ENST00000579211 LYG2Q86SG7 212 aa13.16□□□□□ -0.3
ITGB4-205ENST00000579211 SMPXQ9UHP9 88 aa13.16□□□□□ -0.3
ITGB4-205ENST00000579211 PUS1Q9Y606 427 aaKnown RBP eCLIP13.16□□□□□ -0.3
ITGB4-205ENST00000579211 A8MZ25 164 aa13.15□□□□□ -0.3
ITGB4-205ENST00000579211 FAM90A26D6RGX4 464 aa13.15□□□□□ -0.3
ITGB4-205ENST00000579211 PLA2G10O15496 165 aa13.15□□□□□ -0.3
ITGB4-205ENST00000579211 IAPPP10997 89 aa13.15□□□□□ -0.3
ITGB4-205ENST00000579211 BTCP35070 178 aa13.15□□□□□ -0.3
ITGB4-205ENST00000579211 RND2P52198 227 aa13.15□□□□□ -0.3
ITGB4-205ENST00000579211 ATP5IP56385 69 aaPredicted RBP13.15□□□□□ -0.3
ITGB4-205ENST00000579211 RAB11AP62491 216 aa13.15□□□□□ -0.3
ITGB4-205ENST00000579211 DHRS2Q13268 280 aa13.15□□□□□ -0.3
ITGB4-205ENST00000579211 DEFB125Q8N687 156 aa13.15□□□□□ -0.3
ITGB4-205ENST00000579211 OR10C1Q96KK4 312 aa13.15□□□□□ -0.3
ITGB4-205ENST00000579211 RHPN1-AS1Q9BWJ2 59 aa13.15□□□□□ -0.3
ITGB4-205ENST00000579211 C19orf73Q9NVV2 129 aa13.15□□□□□ -0.3
ITGB4-205ENST00000579211 TRAV6A0A075B6T7 132 aa13.14□□□□□ -0.31
ITGB4-205ENST00000579211 IGHV3OR16-13A0A075B7E8 117 aa13.14□□□□□ -0.31
ITGB4-205ENST00000579211 IGHV3-74A0A0B4J1X5 117 aa13.14□□□□□ -0.31
ITGB4-205ENST00000579211 WRBO00258 174 aa13.14□□□□□ -0.31
ITGB4-205ENST00000579211 PITX3O75364 302 aa13.14□□□□□ -0.31
ITGB4-205ENST00000579211 TIGITQ495A1 244 aa13.14□□□□□ -0.31
ITGB4-205ENST00000579211 MZT2BQ6NZ67 158 aa13.14□□□□□ -0.31
ITGB4-205ENST00000579211 PRSS54Q6PEW0 395 aa13.14□□□□□ -0.31
ITGB4-205ENST00000579211 OR1S2Q8NGQ3 325 aa13.14□□□□□ -0.31
ITGB4-205ENST00000579211 ACY3Q96HD9 319 aa13.14□□□□□ -0.31
ITGB4-205ENST00000579211 NARS2Q96I59 477 aaKnown RBP13.14□□□□□ -0.31
ITGB4-205ENST00000579211 CIB3Q96Q77 187 aaPredicted RBP13.14□□□□□ -0.31
ITGB4-205ENST00000579211 SPAG8Q99932 426 aaPredicted RBP13.14□□□□□ -0.31
ITGB4-205ENST00000579211 WDR12Q9GZL7 423 aaKnown RBP13.14□□□□□ -0.31
ITGB4-205ENST00000579211 MAGT1Q9H0U3 335 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms