RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ARPC1AQ92747 370 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 C1orf159Q96HA4 380 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 SLC25A33Q9BSK2 321 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 C20orf24Q9BUV8 137 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 MLXQ9UH92 298 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 ROS1P08922 2347 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 COL6A6A6NMZ7 2263 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 TRAV20A0A0B4J274 112 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 B4DSR2 109 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 CLDN34H7C241 214 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 PPP1R2P9O14990 202 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 OR7C2O60412 319 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 CTRB1P17538 263 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 S100PP25815 95 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 MLANAQ16655 118 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 ZNF674Q2M3X9 581 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 GCSAMLQ5JQS6 135 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 CTRB2Q6GPI1 263 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 TTC9CQ8N5M4 171 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 Q8N6K4 173 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 ANAPC16Q96DE5 110 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 TCEAL7Q9BRU2 100 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 FNDC4Q9H6D8 234 aaPredicted RBP8.87□□□□□ -0.99
SKA2-204ENST00000578519 DOK5Q9P104 306 aa8.87□□□□□ -0.99
SKA2-204ENST00000578519 IGHV1-69DA0A0B4J2H0 117 aa8.86□□□□□ -0.99
SKA2-204ENST00000578519 A0A1W2PRE2 83 aa8.86□□□□□ -0.99
SKA2-204ENST00000578519 C1orf196B1AJZ1 125 aa8.86□□□□□ -0.99
SKA2-204ENST00000578519 FCN1O00602 326 aa8.86□□□□□ -0.99
SKA2-204ENST00000578519 HYPMO75409 117 aa8.86□□□□□ -0.99
SKA2-204ENST00000578519 IGHV1-69P01742 117 aa8.86□□□□□ -0.99
SKA2-204ENST00000578519 PRB1P04280 392 aa8.86□□□□□ -0.99
SKA2-204ENST00000578519 FOLR2P14207 255 aa8.86□□□□□ -0.99
SKA2-204ENST00000578519 SAA4P35542 130 aa8.86□□□□□ -0.99
SKA2-204ENST00000578519 MFAP4P55083 255 aa8.86□□□□□ -0.99
SKA2-204ENST00000578519 PLP1P60201 277 aa8.86□□□□□ -0.99
SKA2-204ENST00000578519 RAB5BP61020 215 aa8.86□□□□□ -0.99
SKA2-204ENST00000578519 CX3CL1P78423 397 aa8.86□□□□□ -0.99
SKA2-204ENST00000578519 FLI1Q01543 452 aaPredicted RBP8.86□□□□□ -0.99
SKA2-204ENST00000578519 OR51G1Q8NGK1 321 aa8.86□□□□□ -0.99
SKA2-204ENST00000578519 OR5B12Q96R08 314 aa8.86□□□□□ -0.99
SKA2-204ENST00000578519 PARLQ9H300 379 aa8.86□□□□□ -0.99
SKA2-204ENST00000578519 SEPSECSQ9HD40 501 aaKnown RBP8.86□□□□□ -0.99
SKA2-204ENST00000578519 GAR1Q9NY12 217 aaKnown RBP8.86□□□□□ -0.99
SKA2-204ENST00000578519 DOCK11Q5JSL3 2073 aa8.85□□□□□ -0.99
SKA2-204ENST00000578519 IGKV1OR2-108A0A075B7D4 117 aa8.85□□□□□ -0.99
SKA2-204ENST00000578519 HLA-DRB1P01911 266 aa8.85□□□□□ -0.99
SKA2-204ENST00000578519 MSMBP08118 114 aa8.85□□□□□ -0.99
SKA2-204ENST00000578519 UBE2G2P60604 165 aa8.85□□□□□ -0.99
SKA2-204ENST00000578519 ADIRFQ15847 76 aa8.85□□□□□ -0.99
SKA2-204ENST00000578519 LDLRAD2Q5SZI1 272 aa8.85□□□□□ -0.99
SKA2-204ENST00000578519 MIR17HGQ75NE6 70 aa8.85□□□□□ -0.99
SKA2-204ENST00000578519 TXN2Q99757 166 aa8.85□□□□□ -0.99
SKA2-204ENST00000578519 SSX3Q99909 188 aa8.85□□□□□ -0.99
SKA2-204ENST00000578519 PAXXQ9BUH6 204 aa8.85□□□□□ -0.99
SKA2-204ENST00000578519 MEGF9Q9H1U4 602 aa8.85□□□□□ -0.99
SKA2-204ENST00000578519 OR51M1Q9H341 326 aa8.85□□□□□ -0.99
SKA2-204ENST00000578519 BEX4Q9NWD9 120 aaPredicted RBP8.85□□□□□ -0.99
SKA2-204ENST00000578519 LY96Q9Y6Y9 160 aa8.85□□□□□ -0.99
SKA2-204ENST00000578519 SPTBN4Q9H254 2564 aa8.85□□□□□ -0.99
SKA2-204ENST00000578519 NCOR2Q9Y618 2525 aa8.84□□□□□ -0.99
SKA2-204ENST00000578519 IGHV4-61A0A0C4DH41 118 aa8.84□□□□□ -0.99
SKA2-204ENST00000578519 CENPVL3A0A0U1RRI6 287 aa8.84□□□□□ -0.99
SKA2-204ENST00000578519 COLCA2A8K830 154 aa8.84□□□□□ -0.99
SKA2-204ENST00000578519 I3L2K1 104 aa8.84□□□□□ -0.99
SKA2-204ENST00000578519 J3QLI3 93 aa8.84□□□□□ -0.99
SKA2-204ENST00000578519 CD99P14209 185 aa8.84□□□□□ -0.99
SKA2-204ENST00000578519 RPL19P84098 196 aaKnown RBP8.84□□□□□ -0.99
SKA2-204ENST00000578519 CLEC12BQ2HXU8 276 aa8.84□□□□□ -0.99
SKA2-204ENST00000578519 ZNF48Q96MX3 618 aaPredicted RBP8.84□□□□□ -0.99
SKA2-204ENST00000578519 BBC3Q96PG8 261 aaPredicted RBP8.84□□□□□ -0.99
SKA2-204ENST00000578519 RBM14Q96PK6 669 aaKnown RBP8.84□□□□□ -0.99
SKA2-204ENST00000578519 PITPNC1Q9UKF7 332 aa8.84□□□□□ -0.99
SKA2-204ENST00000578519 HIGD1AQ9Y241 93 aa8.84□□□□□ -0.99
SKA2-204ENST00000578519 IGKV1D-37A0A075B6S9 117 aa8.83□□□□□ -1
SKA2-204ENST00000578519 H7BYZ3 331 aa8.83□□□□□ -1
SKA2-204ENST00000578519 M0QZK8 103 aa8.83□□□□□ -1
SKA2-204ENST00000578519 GNG7O60262 68 aa8.83□□□□□ -1
SKA2-204ENST00000578519 RD3LP0DJH9 198 aa8.83□□□□□ -1
SKA2-204ENST00000578519 ORM2P19652 201 aa8.83□□□□□ -1
SKA2-204ENST00000578519 YPEL3P61236 119 aaPredicted RBP8.83□□□□□ -1
SKA2-204ENST00000578519 UBE2L3P68036 154 aaKnown RBP8.83□□□□□ -1
SKA2-204ENST00000578519 KCNIP4Q6PIL6 250 aa8.83□□□□□ -1
SKA2-204ENST00000578519 LINC00305Q7Z4B0 112 aa8.83□□□□□ -1
SKA2-204ENST00000578519 LRRC75A-AS1Q8N1F1 130 aa8.83□□□□□ -1
SKA2-204ENST00000578519 Q8N9W7 124 aa8.83□□□□□ -1
SKA2-204ENST00000578519 LINC01356Q8N9X3 169 aa8.83□□□□□ -1
SKA2-204ENST00000578519 OR5AU1Q8NGC0 362 aa8.83□□□□□ -1
SKA2-204ENST00000578519 OR1B1Q8NGR6 318 aa8.83□□□□□ -1
SKA2-204ENST00000578519 Q8WTZ3 238 aa8.83□□□□□ -1
SKA2-204ENST00000578519 C11orf52Q96A22 123 aa8.83□□□□□ -1
SKA2-204ENST00000578519 C7orf69Q9H7B7 122 aa8.83□□□□□ -1
SKA2-204ENST00000578519 ZNF355PQ9NSJ1 428 aa8.83□□□□□ -1
SKA2-204ENST00000578519 MOB4Q9Y3A3 225 aa8.83□□□□□ -1
SKA2-204ENST00000578519 PRRC2CQ9Y520 2896 aaKnown RBP8.83□□□□□ -1
SKA2-204ENST00000578519 TET2Q6N021 2002 aaPredicted RBP8.83□□□□□ -1
SKA2-204ENST00000578519 CACNA1AO00555 2505 aa8.82□□□□□ -1
SKA2-204ENST00000578519 IGHV4-30-2A0A087WSY4 118 aa8.82□□□□□ -1
SKA2-204ENST00000578519 MDFIC2A0A1B0GVS7 189 aa8.82□□□□□ -1
SKA2-204ENST00000578519 C9JCJ5 164 aa8.82□□□□□ -1
SKA2-204ENST00000578519 EIF3GO75821 320 aaKnown RBP eCLIP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms