RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 TSPAN4O14817 238 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 SCGNO76038 276 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 DHFRP00374 187 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 HPRT1P00492 218 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 PMP2P02689 132 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 TRAPPC2P0DI81 140 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 TRAPPC2BP0DI82 140 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 C8orf88P0DMB2 117 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 OR13C7P0DN81 318 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 NQO2P16083 231 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 GNRHRP30968 328 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 LPAR6P43657 344 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 RFX2P48378 723 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 ATP5IP56385 69 aaPredicted RBP4.61□□□□□ -1.67
NUP88-212ENST00000576708 TAS2R31P59538 309 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 LSM3P62310 102 aaKnown RBP4.61□□□□□ -1.67
NUP88-212ENST00000576708 WT1-ASQ06250 92 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 CATR1Q13166 79 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 IL18Q14116 193 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 POU2AF1Q16633 256 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 AADACL3Q5VUY0 350 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 PLET1Q6UQ28 207 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 BPIFCQ8NFQ6 507 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 DMBX1Q8NFW5 382 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 OR5AP2Q8NGF4 316 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 OR1L6Q8NGR2 347 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 CD300LFQ8TDQ1 290 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 FCGR1BQ92637 280 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 ZNF414Q96IQ9 312 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 CXorf58Q96LI9 332 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 CHRDL1Q9BU40 450 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 ZNF436Q9C0F3 470 aaPredicted RBP4.61□□□□□ -1.67
NUP88-212ENST00000576708 COMMD5Q9GZQ3 224 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 EHFQ9NZC4 300 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 MRPL27Q9P0M9 148 aaKnown RBP4.61□□□□□ -1.67
NUP88-212ENST00000576708 RNF24Q9Y225 148 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 ETV7Q9Y603 341 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 IGHV3-49A0A0A0MS15 119 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 A0A0J9YWU9 116 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 CXorf65A6NEN9 183 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 RBFOX2O43251 390 aaKnown RBP eCLIP4.6□□□□□ -1.67
NUP88-212ENST00000576708 TGOLN2O43493 480 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 NDUFS6O75380 124 aaKnown RBP4.6□□□□□ -1.67
NUP88-212ENST00000576708 PGLYRP1O75594 196 aaPredicted RBP4.6□□□□□ -1.67
NUP88-212ENST00000576708 KRASP01116 189 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 IGHV3-48P01763 117 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 RLN1P04808 185 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 SERPINE2P07093 398 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 RPL35AP18077 110 aaKnown RBP4.6□□□□□ -1.67
NUP88-212ENST00000576708 G6PCP35575 357 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 TAS2R20P59543 309 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 HERV-K104P61576 105 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 MSMO1Q15800 293 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 DEFB135Q30KP9 77 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 ODF3L2Q3SX64 289 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 ANXA2RQ3ZCQ2 193 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 ZNF575Q86XF7 245 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 GDPD1Q8N9F7 314 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 UBAC2Q8NBM4 344 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 OR5B3Q8NH48 314 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 SCARB1Q8WTV0 552 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 MITD1Q8WV92 249 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 FCAMRQ8WWV6 532 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 TMEM190Q8WZ59 177 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 ZNF2Q9BSG1 426 aaPredicted RBP4.6□□□□□ -1.67
NUP88-212ENST00000576708 C20orf24Q9BUV8 137 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 FXYD6Q9H0Q3 95 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 PLEKHA2Q9HB19 425 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 IFT46Q9NQC8 304 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 DIABLOQ9NR28 239 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 NDUFA4L2Q9NRX3 87 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 UFC1Q9Y3C8 167 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 OR51B2Q9Y5P1 312 aa4.6□□□□□ -1.67
NUP88-212ENST00000576708 IGKV3-7A0A075B6H7 116 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 IGHV3OR16-13A0A075B7E8 117 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 A0A0A6YYH2 397 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 IGHV3-74A0A0B4J1X5 117 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 TRAV25A0A0B4J276 109 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 A6NJ64 397 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 K7EIM0 57 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 XRCC3O43542 346 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 SCGB2A1O75556 95 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 LY6G6CO95867 125 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 APOA1P02647 267 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 CTSDP07339 412 aaPredicted RBP4.59□□□□□ -1.67
NUP88-212ENST00000576708 F2RP25116 425 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 HLA-DMAP28067 261 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 FCGR2BP31994 310 aaPredicted RBP4.59□□□□□ -1.67
NUP88-212ENST00000576708 TFPI2P48307 235 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 ERVK-16P61578 105 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 SLAQ13239 276 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 ANKRD55Q3KP44 614 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 PHLDA2Q53GA4 152 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 Q56UQ5 140 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 DHRS11Q6UWP2 260 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 LYG2Q86SG7 212 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 APRG1Q8IVJ8 170 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 SAMD12Q8N8I0 201 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 OR1L8Q8NGR8 309 aa4.59□□□□□ -1.67
NUP88-212ENST00000576708 RNASE8Q8TDE3 154 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms