RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PRB2P02812 416 aaPredicted RBP6.11□□□□□ -1.43
CCDC40-215ENST00000576033 ELANEP08246 267 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 FGF2P09038 288 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 SEC11BP0C7V7 166 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 SPP1P10451 314 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 IGLL1P15814 213 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 EDN2P20800 178 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 SULT1A1P50225 295 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 SULT1A2P50226 295 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 SLURP1P55000 103 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 ERVK-16P61578 105 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 VAMP2P63027 116 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 ZNF266Q14584 549 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 AKIRIN2Q53H80 203 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 EIF5AL1Q6IS14 154 aaKnown RBP6.11□□□□□ -1.43
CCDC40-215ENST00000576033 H2BFWTQ7Z2G1 175 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 HSD17B13Q7Z5P4 300 aaPredicted RBP6.11□□□□□ -1.43
CCDC40-215ENST00000576033 COMMD7Q86VX2 200 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 MRPL41Q8IXM3 137 aaKnown RBP6.11□□□□□ -1.43
CCDC40-215ENST00000576033 LINC00482Q8N8I6 264 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 RNASE11Q8TAA1 199 aaKnown RBP6.11□□□□□ -1.43
CCDC40-215ENST00000576033 PCNPQ8WW12 178 aaKnown RBP6.11□□□□□ -1.43
CCDC40-215ENST00000576033 SAT2Q96F10 170 aaPredicted RBP6.11□□□□□ -1.43
CCDC40-215ENST00000576033 CXorf58Q96LI9 332 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 FANCD2OSQ96PS1 177 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 PARD6GQ9BYG4 376 aaPredicted RBP6.11□□□□□ -1.43
CCDC40-215ENST00000576033 RBKSQ9H477 322 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 ZC4H2Q9NQZ6 224 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 CACFD1Q9UGQ2 172 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 ZNF580Q9UK33 172 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 OR51B2Q9Y5P1 312 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 BORCS7-ASMTA0A0B4J1R7 106 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 I3L521 148 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 WRBO00258 174 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 ACTL6BO94805 426 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 NDUFB8O95169 186 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 PF4P02776 101 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 CAV2P51636 162 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 SPCS3P61009 180 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 RHOGP84095 191 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 ARL16Q0P5N6 197 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 VWC2Q2TAL6 325 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 OXLD1Q5BKU9 147 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 LYPD6BQ8NI32 183 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 VSTM2AQ8TAG5 236 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 RNF141Q8WVD5 230 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 C4orf3Q8WVX3 66 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 TMED6Q8WW62 240 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 CIB3Q96Q77 187 aaPredicted RBP6.1□□□□□ -1.43
CCDC40-215ENST00000576033 OR4C12Q96R67 309 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 P2RX4Q99571 388 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 ATP5SQ99766 215 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 SMIM3Q9BZL3 60 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 HIPK2Q9H2X6 1198 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 TMEM14BQ9NUH8 114 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 ZNF257Q9Y2Q1 563 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 SELENOKQ9Y6D0 94 aa6.1□□□□□ -1.43
CCDC40-215ENST00000576033 C15orf62A8K5M9 175 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 PPP5D1E7EU14 171 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 INS-IGF2F8WCM5 200 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 CCL24O00175 119 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 DFFBO76075 338 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 SCAF4O95104 1147 aaKnown RBP6.09□□□□□ -1.43
CCDC40-215ENST00000576033 IGHV3-48P01763 117 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 LGALS1P09382 135 aaKnown RBP6.09□□□□□ -1.43
CCDC40-215ENST00000576033 OR8U8P0C7N1 319 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 OR13C7P0DN81 318 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 IAPPP10997 89 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 CTRB1P17538 263 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 HOXD3P31249 432 aaPredicted RBP6.09□□□□□ -1.43
CCDC40-215ENST00000576033 CDX1P47902 265 aaPredicted RBP6.09□□□□□ -1.43
CCDC40-215ENST00000576033 FHL3Q13643 280 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 CTRB2Q6GPI1 263 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 STX12Q86Y82 276 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 TTC9CQ8N5M4 171 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 OR11H1Q8NG94 326 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 OR5C1Q8NGR4 320 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 OR4A5Q8NH83 315 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 DTD1Q8TEA8 209 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 CCDC140Q96MF4 163 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 COMMD5Q9GZQ3 224 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 NDUFA4L2Q9NRX3 87 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 PSENENQ9NZ42 101 aa6.09□□□□□ -1.43
CCDC40-215ENST00000576033 IGLV11-55A0A075B6I3 123 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 TRBV9A0A0B4J1U6 114 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 RAB19A4D1S5 217 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 NPIPB5A8MRT5 1133 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 PRSS46E5RG02 174 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 H3BP45 60 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 CST7O76096 145 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 ATP6V0CP27449 155 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 MAS1LP35410 378 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 RAB5CP51148 216 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 TMEM267Q0VDI3 215 aaPredicted RBP6.08□□□□□ -1.44
CCDC40-215ENST00000576033 CLINT1Q14677 625 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 C15orf32Q32M92 178 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 BTNL8Q6UX41 500 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 COMMD1Q8N668 190 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 OR4F17Q8NGA8 305 aa6.08□□□□□ -1.44
CCDC40-215ENST00000576033 OR1S2Q8NGQ3 325 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms