RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 TMEM14BQ9NUH8 114 aa10.15□□□□□ -0.78
RPAIN-216ENST00000575599 MFSD2BA6NFX1 497 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 BMPR1BO00238 502 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 PITX3O75364 302 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 MPC2O95563 127 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 MBPP02686 304 aaPredicted RBP10.14□□□□□ -0.79
RPAIN-216ENST00000575599 NUP62P37198 522 aaPredicted RBP10.14□□□□□ -0.79
RPAIN-216ENST00000575599 HOXA1P49639 335 aaPredicted RBP10.14□□□□□ -0.79
RPAIN-216ENST00000575599 HSPE1P61604 102 aaKnown RBP10.14□□□□□ -0.79
RPAIN-216ENST00000575599 TNFRSF9Q07011 255 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 KLF5Q13887 457 aaPredicted RBP10.14□□□□□ -0.79
RPAIN-216ENST00000575599 ZFP69Q49AA0 526 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 HAPLN4Q86UW8 402 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 OR9G4Q8NGQ1 327 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 OR52E5Q8NH55 327 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 EEF1AKMT3Q96AZ1 226 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 CCDC140Q96MF4 163 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 MAGT1Q9H0U3 335 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 HIPK2Q9H2X6 1198 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 RCL1Q9Y2P8 373 aaKnown RBP10.14□□□□□ -0.79
RPAIN-216ENST00000575599 DMRT1Q9Y5R6 373 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 SMLR1H3BR10 107 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 K7EPK0 472 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 CYB5BO43169 146 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 SYNGR2O43760 224 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 SSSCA1O60232 199 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 POLR2GP62487 172 aaKnown RBP eCLIP10.14□□□□□ -0.79
RPAIN-216ENST00000575599 ID3Q02535 119 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 SPINK9Q5DT21 86 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 FAM209BQ5JX69 171 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 SLC25A24Q6NUK1 477 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 CLEC19AQ6UXS0 136 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 WDR89Q96FK6 387 aaPredicted RBP10.14□□□□□ -0.79
RPAIN-216ENST00000575599 CIB3Q96Q77 187 aaPredicted RBP10.14□□□□□ -0.79
RPAIN-216ENST00000575599 RBKSQ9H477 322 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 PLEKHA3Q9HB20 300 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 THYN1Q9P016 225 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 HSPB7Q9UBY9 170 aa10.14□□□□□ -0.79
RPAIN-216ENST00000575599 ZNF256Q9Y2P7 627 aaPredicted RBP10.14□□□□□ -0.79
RPAIN-216ENST00000575599 FXYD6-FXYD2A0A087WZ82 144 aa10.13□□□□□ -0.79
RPAIN-216ENST00000575599 E5RGE8 158 aa10.13□□□□□ -0.79
RPAIN-216ENST00000575599 HNRNPCP07910 306 aaKnown RBP eCLIP10.13□□□□□ -0.79
RPAIN-216ENST00000575599 IAPPP10997 89 aa10.13□□□□□ -0.79
RPAIN-216ENST00000575599 ARL3P36405 182 aa10.13□□□□□ -0.79
RPAIN-216ENST00000575599 RPP30P78346 268 aaKnown RBP10.13□□□□□ -0.79
RPAIN-216ENST00000575599 KLK9Q2XQG4 91 aa10.13□□□□□ -0.79
RPAIN-216ENST00000575599 C11orf87Q6NUJ2 197 aa10.13□□□□□ -0.79
RPAIN-216ENST00000575599 PRSS54Q6PEW0 395 aa10.13□□□□□ -0.79
RPAIN-216ENST00000575599 DTD1Q8TEA8 209 aa10.13□□□□□ -0.79
RPAIN-216ENST00000575599 PPP1R14BQ96C90 147 aa10.13□□□□□ -0.79
RPAIN-216ENST00000575599 CXorf58Q96LI9 332 aa10.13□□□□□ -0.79
RPAIN-216ENST00000575599 RAB40CQ96S21 281 aa10.13□□□□□ -0.79
RPAIN-216ENST00000575599 HEYLQ9NQ87 328 aaPredicted RBP10.13□□□□□ -0.79
RPAIN-216ENST00000575599 ZC4H2Q9NQZ6 224 aa10.13□□□□□ -0.79
RPAIN-216ENST00000575599 KLK9Q9UKQ9 250 aa10.13□□□□□ -0.79
RPAIN-216ENST00000575599 F11RQ9Y624 299 aaKnown RBP10.13□□□□□ -0.79
RPAIN-216ENST00000575599 IGHV3-21A0A0B4J1V1 117 aa10.12□□□□□ -0.79
RPAIN-216ENST00000575599 GGCTO75223 188 aaKnown RBP10.12□□□□□ -0.79
RPAIN-216ENST00000575599 DEDDO75618 318 aa10.12□□□□□ -0.79
RPAIN-216ENST00000575599 C1QBP02746 253 aa10.12□□□□□ -0.79
RPAIN-216ENST00000575599 GPR183P32249 361 aa10.12□□□□□ -0.79
RPAIN-216ENST00000575599 MFAP2P55001 183 aa10.12□□□□□ -0.79
RPAIN-216ENST00000575599 ERHP84090 104 aaKnown RBP10.12□□□□□ -0.79
RPAIN-216ENST00000575599 PRCDQ00LT1 54 aa10.12□□□□□ -0.79
RPAIN-216ENST00000575599 IL15RAQ13261 267 aa10.12□□□□□ -0.79
RPAIN-216ENST00000575599 INO80EQ8NBZ0 244 aaPredicted RBP10.12□□□□□ -0.79
RPAIN-216ENST00000575599 PGPEP1Q9NXJ5 209 aa10.12□□□□□ -0.79
RPAIN-216ENST00000575599 PSENENQ9NZ42 101 aa10.12□□□□□ -0.79
RPAIN-216ENST00000575599 MBD2Q9UBB5 411 aa10.12□□□□□ -0.79
RPAIN-216ENST00000575599 PEMTQ9UBM1 199 aa10.12□□□□□ -0.79
RPAIN-216ENST00000575599 PAIP2BQ9ULR5 123 aaKnown RBP10.12□□□□□ -0.79
RPAIN-216ENST00000575599 TRBV7-1A0A0A6YYK4 115 aa10.11□□□□□ -0.79
RPAIN-216ENST00000575599 OR2C1O95371 312 aa10.11□□□□□ -0.79
RPAIN-216ENST00000575599 SLC25A4P12235 298 aa10.11□□□□□ -0.79
RPAIN-216ENST00000575599 CAV2P51636 162 aa10.11□□□□□ -0.79
RPAIN-216ENST00000575599 CD300CQ08708 224 aa10.11□□□□□ -0.79
RPAIN-216ENST00000575599 AARDQ4LEZ3 155 aa10.11□□□□□ -0.79
RPAIN-216ENST00000575599 ZNF546Q86UE3 836 aa10.11□□□□□ -0.79
RPAIN-216ENST00000575599 ZNF502Q8TBZ5 544 aa10.11□□□□□ -0.79
RPAIN-216ENST00000575599 HYLS1Q96M11 299 aa10.11□□□□□ -0.79
RPAIN-216ENST00000575599 TRAV14DV4A0A0A6YYC5 116 aa10.1□□□□□ -0.79
RPAIN-216ENST00000575599 IFNA10P01566 189 aa10.1□□□□□ -0.79
RPAIN-216ENST00000575599 CLEC3BP05452 202 aa10.1□□□□□ -0.79
RPAIN-216ENST00000575599 SNCAP37840 140 aa10.1□□□□□ -0.79
RPAIN-216ENST00000575599 P2RY1P47900 373 aa10.1□□□□□ -0.79
RPAIN-216ENST00000575599 Q5BKY6 102 aa10.1□□□□□ -0.79
RPAIN-216ENST00000575599 IL34Q6ZMJ4 242 aa10.1□□□□□ -0.79
RPAIN-216ENST00000575599 NOXA1Q86UR1 476 aa10.1□□□□□ -0.79
RPAIN-216ENST00000575599 OR2C3Q8N628 320 aa10.1□□□□□ -0.79
RPAIN-216ENST00000575599 MISP3Q96FF7 219 aa10.1□□□□□ -0.79
RPAIN-216ENST00000575599 SLC25A31Q9H0C2 315 aa10.1□□□□□ -0.79
RPAIN-216ENST00000575599 OR5AC2Q9NZP5 309 aa10.1□□□□□ -0.79
RPAIN-216ENST00000575599 ARPC5O15511 151 aa10.09□□□□□ -0.79
RPAIN-216ENST00000575599 IGLV1-51P01701 117 aa10.09□□□□□ -0.79
RPAIN-216ENST00000575599 CSN3P07498 182 aa10.09□□□□□ -0.79
RPAIN-216ENST00000575599 GP9P14770 177 aa10.09□□□□□ -0.79
RPAIN-216ENST00000575599 EIF2B2P49770 351 aaKnown RBP10.09□□□□□ -0.79
RPAIN-216ENST00000575599 SUB1P53999 127 aaKnown RBP eCLIP10.09□□□□□ -0.79
RPAIN-216ENST00000575599 TAS2R30P59541 319 aa10.09□□□□□ -0.79
RPAIN-216ENST00000575599 RAB11AP62491 216 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms