RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 TSC22D3Q99576 134 aa6.89□□□□□ -1.31
CIITA-208ENST00000572665 WFDC10AQ9H1F0 79 aa6.89□□□□□ -1.31
CIITA-208ENST00000572665 FBXL17Q9UF56 701 aa6.89□□□□□ -1.31
CIITA-208ENST00000572665 S4R3C0 116 aa6.89□□□□□ -1.31
CIITA-208ENST00000572665 KIR2DL5BA0A0G2JN68 375 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 KIR2DL5BA0A0G2JPC4 375 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 IGLC7A0M8Q6 106 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 MFSD2BA6NFX1 497 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 NDUFA4O00483 81 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 XRCC3O43542 346 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 SERPINE2P07093 398 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 OR13C7P0DN81 318 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 F2RP25116 425 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 TGFBR1P36897 503 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 RPL5P46777 297 aaKnown RBP6.88□□□□□ -1.31
CIITA-208ENST00000572665 BRWD1-AS2P59051 145 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 RELQ04864 619 aaPredicted RBP6.88□□□□□ -1.31
CIITA-208ENST00000572665 CTF1Q16619 201 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 GGNBP1Q5YKI7 109 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 LPCAT3Q6P1A2 487 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 KIR2DL5AQ8N109 375 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 GVQW1Q8N7I0 195 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 OR5B3Q8NH48 314 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 KIR2DL5BQ8NHK3 375 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 TMEM190Q8WZ59 177 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 OVOL2Q9BRP0 275 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 AUNIPQ9H7T9 357 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 C21orf62Q9NYP8 219 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 EHFQ9NZC4 300 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 PRNDQ9UKY0 176 aa6.88□□□□□ -1.31
CIITA-208ENST00000572665 KLK5Q9Y337 293 aaPredicted RBP6.88□□□□□ -1.31
CIITA-208ENST00000572665 LYSTQ99698 3801 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 A0A1B0GW64 132 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 OR2T8A6NH00 312 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 K7EMT4 169 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 NUPL2O15504 423 aaKnown RBP6.87□□□□□ -1.31
CIITA-208ENST00000572665 CD5P06127 495 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 CAMPP49913 170 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 NCS1P62166 190 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 TNFRSF9Q07011 255 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 UBE2NLQ5JXB2 153 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 DHRS11Q6UWP2 260 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 UNQ9165/PRO28630Q6UXU0 137 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 ZNF818PQ6ZRF7 136 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 C19orf35Q6ZS72 473 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 GPR141Q7Z602 305 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 OR5H2Q8NGV7 314 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 OR6F1Q8NGZ6 308 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 SLC25A38Q96DW6 304 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 GALNT14Q96FL9 552 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 ZNF2Q9BSG1 426 aaPredicted RBP6.87□□□□□ -1.31
CIITA-208ENST00000572665 C20orf24Q9BUV8 137 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 HINT2Q9BX68 163 aa6.87□□□□□ -1.31
CIITA-208ENST00000572665 NAA50Q9GZZ1 169 aaKnown RBP6.87□□□□□ -1.31
CIITA-208ENST00000572665 FAM212BQ9NTI7 297 aaPredicted RBP6.87□□□□□ -1.31
CIITA-208ENST00000572665 F11RQ9Y624 299 aaKnown RBP6.87□□□□□ -1.31
CIITA-208ENST00000572665 TEX50A0A1B0GTY4 177 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 SMIM31A0A1B0GVY4 71 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 C15orf62A8K5M9 175 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 GPR31O00270 319 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 S1PR2O95136 353 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 RLN1P04808 185 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 EIF4EP06730 217 aaKnown RBP6.86□□□□□ -1.31
CIITA-208ENST00000572665 GNRHRP30968 328 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 VBP1P61758 197 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 LSM3P62310 102 aaKnown RBP6.86□□□□□ -1.31
CIITA-208ENST00000572665 PAFAH1B2P68402 229 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 Q56UQ5 140 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 TMEM69Q5SWH9 247 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 GPR107Q5VW38 600 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 UBAC2Q8NBM4 344 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 OR5H6Q8NGV6 325 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 SLC25A46Q96AG3 418 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 MOB3AQ96BX8 217 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 DGCR14Q96DF8 476 aaKnown RBP6.86□□□□□ -1.31
CIITA-208ENST00000572665 NDUFA4L2Q9NRX3 87 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 OR51B2Q9Y5P1 312 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 CSMD3Q7Z407 3707 aa6.86□□□□□ -1.31
CIITA-208ENST00000572665 TRAV3A0A0B4J244 114 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 IGHV3-35A0A0C4DH35 117 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 SCGB2A1O75556 95 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 PGLYRP1O75594 196 aaPredicted RBP6.85□□□□□ -1.31
CIITA-208ENST00000572665 LY6G6CO95867 125 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 KRASP01116 189 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 PTHLHP12272 177 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 PRSS3P35030 304 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 LPAR6P43657 344 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 TMBIM6P55061 237 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 TSPAN5P62079 268 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 WT1-ASQ06250 92 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 LYG2Q86SG7 212 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 OR10W1Q8NGF6 305 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 OR1P1Q8NH06 330 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 SCARB1Q8WTV0 552 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 RAB2BQ8WUD1 216 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 TXN2Q99757 166 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 BCL7BQ9BQE9 202 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 GINS3Q9BRX5 216 aa6.85□□□□□ -1.31
CIITA-208ENST00000572665 A0A0J9YWU9 116 aa6.84□□□□□ -1.31
CIITA-208ENST00000572665 MEIS3P1A6NDR6 274 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms