RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 ZFP30Q9Y2G7 519 aa8.77□□□□□ -1.01
CCDC40-207ENST00000572253 INTS1Q8N201 2190 aaKnown RBP8.77□□□□□ -1.01
CCDC40-207ENST00000572253 PEX7O00628 323 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 IGLC2P0DOY2 106 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 IGLC3P0DOY3 106 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 COL8A2P25067 703 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 TBR1Q16650 682 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 MLANAQ16655 118 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 VSTM2AQ8TAG5 236 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 ZNF355PQ9NSJ1 428 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 SPTAN1Q13813 2472 aaKnown RBP8.76□□□□□ -1.01
CCDC40-207ENST00000572253 TTC28Q96AY4 2481 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 CA1P00915 261 aaPredicted RBP8.76□□□□□ -1.01
CCDC40-207ENST00000572253 Q8N976 141 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 SSUH2Q9Y2M2 353 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 LAMTOR2Q9Y2Q5 125 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 RNF114Q9Y508 228 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 TNCP24821 2201 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 TRAV5A0A0B4J249 113 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 SRRM4A7MD48 611 aaKnown RBP8.76□□□□□ -1.01
CCDC40-207ENST00000572253 M0R2Z0 102 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 CTRLP40313 264 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 MMDQ15546 238 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 PRR27Q6MZM9 219 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 NIT1Q86X76 327 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 FAM216BQ8N7L0 139 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 OR10W1Q8NGF6 305 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 C18orf32Q8TCD1 76 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 SLC25A2Q9BXI2 301 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 CADP27708 2225 aa8.76□□□□□ -1.01
CCDC40-207ENST00000572253 SIAH2O43255 324 aa8.75□□□□□ -1.01
CCDC40-207ENST00000572253 HYPMO75409 117 aa8.75□□□□□ -1.01
CCDC40-207ENST00000572253 RNASEKQ6P5S7 137 aaKnown RBP8.75□□□□□ -1.01
CCDC40-207ENST00000572253 STXBP6Q8NFX7 210 aa8.75□□□□□ -1.01
CCDC40-207ENST00000572253 OR2T6Q8NHC8 308 aa8.75□□□□□ -1.01
CCDC40-207ENST00000572253 FLYWCH2Q96CP2 140 aaKnown RBP8.75□□□□□ -1.01
CCDC40-207ENST00000572253 WNT10AQ9GZT5 417 aa8.75□□□□□ -1.01
CCDC40-207ENST00000572253 TFPI2P48307 235 aa8.75□□□□□ -1.01
CCDC40-207ENST00000572253 DUX4L9Q6RFH8 374 aaPredicted RBP8.75□□□□□ -1.01
CCDC40-207ENST00000572253 ZNF788Q6ZQV5 615 aa8.75□□□□□ -1.01
CCDC40-207ENST00000572253 FAM167A-AS1Q96KT0 104 aa8.75□□□□□ -1.01
CCDC40-207ENST00000572253 LINC00312Q9Y6C7 94 aa8.75□□□□□ -1.01
CCDC40-207ENST00000572253 IGLV3-9A0A075B6K5 115 aa8.75□□□□□ -1.01
CCDC40-207ENST00000572253 C20orf202A1L168 122 aa8.75□□□□□ -1.01
CCDC40-207ENST00000572253 SLAQ13239 276 aa8.75□□□□□ -1.01
CCDC40-207ENST00000572253 PDPNQ86YL7 162 aa8.75□□□□□ -1.01
CCDC40-207ENST00000572253 C22orf15Q8WYQ4 148 aa8.75□□□□□ -1.01
CCDC40-207ENST00000572253 RBM14Q96PK6 669 aaKnown RBP8.75□□□□□ -1.01
CCDC40-207ENST00000572253 MRPL20Q9BYC9 149 aaKnown RBP8.75□□□□□ -1.01
CCDC40-207ENST00000572253 LINC00574Q9H8X3 128 aa8.75□□□□□ -1.01
CCDC40-207ENST00000572253 NDUFA4L2Q9NRX3 87 aa8.75□□□□□ -1.01
CCDC40-207ENST00000572253 TRAV34A0A0B4J273 112 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 C3orf36Q3SXR2 165 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 PLA2G2CQ5R387 149 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 NUDT10Q8NFP7 164 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 NUDT11Q96G61 164 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 MBD3L4A6NDZ8 208 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-207ENST00000572253 MBD3L3A6NE82 208 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-207ENST00000572253 MBD3L5A6NJ08 208 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-207ENST00000572253 SLC25A5P05141 298 aaKnown RBP8.74□□□□□ -1.01
CCDC40-207ENST00000572253 PYYP10082 97 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 NUP35Q8NFH5 326 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 OR4A5Q8NH83 315 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 MBD3L2Q8NHZ7 208 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-207ENST00000572253 NPIPB3Q92617 1050 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 DKK4Q9UBT3 224 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 COLQQ9Y215 455 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-207ENST00000572253 TECTAO75443 2155 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 TCRBV4S1A1TA0A5B7 111 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 IGHV1-46P01743 117 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 CA7P43166 264 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 CAMPP49913 170 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 IGFL2Q6UWQ7 119 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 ZNF833PQ6ZTB9 187 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 ATP5L2Q7Z4Y8 100 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 ZNF329Q86UD4 541 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 OR10X1Q8NGY0 326 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 SNRNP40Q96DI7 357 aaKnown RBP8.74□□□□□ -1.01
CCDC40-207ENST00000572253 LINC00479Q96M42 142 aa8.74□□□□□ -1.01
CCDC40-207ENST00000572253 DMRTA1Q5VZB9 504 aa8.73□□□□□ -1.01
CCDC40-207ENST00000572253 SPACA3Q8IXA5 215 aa8.73□□□□□ -1.01
CCDC40-207ENST00000572253 PERPQ96FX8 193 aa8.73□□□□□ -1.01
CCDC40-207ENST00000572253 LOC102724200A0A096LPH7 203 aaPredicted RBP8.73□□□□□ -1.01
CCDC40-207ENST00000572253 TNXAQ16473 311 aa8.73□□□□□ -1.01
CCDC40-207ENST00000572253 TMEM177Q53S58 311 aa8.73□□□□□ -1.01
CCDC40-207ENST00000572253 ZADH2Q8N4Q0 377 aa8.73□□□□□ -1.01
CCDC40-207ENST00000572253 FAM168AQ92567 244 aa8.73□□□□□ -1.01
CCDC40-207ENST00000572253 CLEC7AQ9BXN2 247 aa8.73□□□□□ -1.01
CCDC40-207ENST00000572253 TRAV9-2A0A087WT02 112 aa8.73□□□□□ -1.01
CCDC40-207ENST00000572253 INS-IGF2F8WCM5 200 aa8.73□□□□□ -1.01
CCDC40-207ENST00000572253 TCF21O43680 179 aa8.73□□□□□ -1.01
CCDC40-207ENST00000572253 TNFRSF1AP19438 455 aa8.73□□□□□ -1.01
CCDC40-207ENST00000572253 RELQ04864 619 aaPredicted RBP8.73□□□□□ -1.01
CCDC40-207ENST00000572253 MEF2CQ06413 473 aaPredicted RBP8.73□□□□□ -1.01
CCDC40-207ENST00000572253 Q56UQ5 140 aa8.73□□□□□ -1.01
CCDC40-207ENST00000572253 ATOH7Q8N100 152 aa8.73□□□□□ -1.01
CCDC40-207ENST00000572253 OR4C13Q8NGP0 309 aa8.73□□□□□ -1.01
CCDC40-207ENST00000572253 TMEM167AQ8TBQ9 72 aa8.73□□□□□ -1.01
CCDC40-207ENST00000572253 MBD6Q96DN6 1003 aa8.73□□□□□ -1.01
CCDC40-207ENST00000572253 FAM181BA6NEQ2 426 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms