RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ZNF736B4DX44 427 aaPredicted RBP2.88□□□□□ -1.95
NUP88-202ENST00000570937 H0YJW9 148 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 RGS5O15539 181 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 ZNF253O75346 499 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 GABARAPO95166 117 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 CNIH1O95406 144 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 HLA-DRB1P01911 266 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 HLA-DQB1P01920 261 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 IFNA6P05013 189 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 IGF1P05019 195 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 CT45A6P0DMU7 189 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 CT45A5P0DMU8 189 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 CT45A7P0DMV0 189 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 CD28P10747 220 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 KIR2DS2P43631 304 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 TAS2R20P59543 309 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 TSPAN5P62079 268 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 NCS1P62166 190 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 CATR1Q13166 79 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 MEF2DQ14814 521 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 MSMO1Q15800 293 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 C5orf64Q2M2E5 130 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 NSUN5P1Q3KNT7 163 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 VMA21Q3ZAQ7 101 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 RPL39P5Q59GN2 51 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 PYHIN1Q6K0P9 492 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 LPCAT3Q6P1A2 487 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 FAM131AQ6UXB0 335 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 ZNF562Q6V9R5 426 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 PPP1R27Q86WC6 154 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 TMEM17Q86X19 198 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 CMTM1Q8IZ96 169 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 H1FOOQ8IZA3 346 aaPredicted RBP2.88□□□□□ -1.95
NUP88-202ENST00000570937 STPG2Q8N412 459 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 Q8N6K4 173 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 ZNF645Q8N7E2 425 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 TCTEX1D1Q8N7M0 179 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 Q8N9W7 124 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 OR5H6Q8NGV6 325 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 OR5H2Q8NGV7 314 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 VSTM2AQ8TAG5 236 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 CD300LFQ8TDQ1 290 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 MAFIPQ8WZ33 124 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 SLC25A38Q96DW6 304 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 HSD17B10Q99714 261 aaKnown RBP2.88□□□□□ -1.95
NUP88-202ENST00000570937 CITED2Q99967 270 aaPredicted RBP2.88□□□□□ -1.95
NUP88-202ENST00000570937 MRPL20Q9BYC9 149 aaKnown RBP2.88□□□□□ -1.95
NUP88-202ENST00000570937 GPR61Q9BZJ8 451 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 OR51J1Q9H342 316 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 SRD5A3Q9H8P0 318 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 PLSCR3Q9NRY6 295 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 SLC35D1Q9NTN3 355 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 SDHAF2Q9NX18 166 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 METTL1Q9UBP6 276 aaKnown RBP2.88□□□□□ -1.95
NUP88-202ENST00000570937 TENM1Q9UKZ4 2725 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 A0A087X0K7 114 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 TRAV41A0A0B4J266 112 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 LOC105371267A0A1B0GV96 52 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 CCDC160A6NGH7 325 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 SULT1C2O00338 296 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 ARPC1BO15143 372 aaKnown RBP2.87□□□□□ -1.95
NUP88-202ENST00000570937 SSX5O60225 188 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 PFDN1O60925 122 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 NDUFA3O95167 84 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 HRASP01112 189 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 PPYP01298 95 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 GIG44P09565 113 aaPredicted RBP2.87□□□□□ -1.95
NUP88-202ENST00000570937 OR9G9P0C7N8 305 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 NFYAP23511 347 aaPredicted RBP2.87□□□□□ -1.95
NUP88-202ENST00000570937 RCVRNP35243 200 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 TGFBR1P36897 503 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 MYCNOSP40205 109 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 ALDH3B2P48448 385 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 LYZP61626 148 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 RPL23AP62750 156 aaKnown RBP2.87□□□□□ -1.95
NUP88-202ENST00000570937 MRPS10P82664 201 aaKnown RBP2.87□□□□□ -1.95
NUP88-202ENST00000570937 SSBP1Q04837 148 aaKnown RBP2.87□□□□□ -1.95
NUP88-202ENST00000570937 FXYD3Q14802 87 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 CDK10Q15131 360 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 PSG5Q15238 335 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 AKIRIN2Q53H80 203 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 ACTBL2Q562R1 376 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 SIGLEC15Q6ZMC9 328 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 KCTD9Q7L273 389 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 CLVS1Q8IUQ0 354 aaPredicted RBP2.87□□□□□ -1.95
NUP88-202ENST00000570937 ZNF695Q8IW36 515 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 GVQW1Q8N7I0 195 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 OR4S2Q8NH73 311 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 TCTEX1D2Q8WW35 142 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 NOL4LQ96MY1 436 aaPredicted RBP2.87□□□□□ -1.95
NUP88-202ENST00000570937 RAB40CQ96S21 281 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 PHB2Q99623 299 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 SPIN2AQ99865 258 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 SPIN2BQ9BPZ2 258 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 SLC5A7Q9GZV3 580 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 PARP12Q9H0J9 701 aaKnown RBP2.87□□□□□ -1.95
NUP88-202ENST00000570937 PARP11Q9NR21 331 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 TAS2R8Q9NYW2 309 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 EHFQ9NZC4 300 aa2.87□□□□□ -1.95
NUP88-202ENST00000570937 FOXA2Q9Y261 457 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms