RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 SEC61BP60468 96 aaKnown RBP2.87□□□□□ -1.95
SMG6-208ENST00000570874 SNRPD2P62316 118 aaKnown RBP2.87□□□□□ -1.95
SMG6-208ENST00000570874 KRTAP1-1Q07627 177 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 P2RY6Q15077 328 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 HMGN3Q15651 99 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 ZNF726P1Q15940 193 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 MLANAQ16655 118 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 PVRIGQ6DKI7 326 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 CRIP3Q6Q6R5 217 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 IGFL2Q6UWQ7 119 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 Q6ZS46 218 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 C9orf139Q6ZV77 190 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 GTF2H5Q6ZYL4 71 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 TMUB2Q71RG4 321 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 TMEM219Q86XT9 240 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 OR5AS1Q8N127 324 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 SVBPQ8N300 66 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 RPRMLQ8N4K4 120 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 RBMXL3Q8N7X1 1067 aaKnown RBP2.87□□□□□ -1.95
SMG6-208ENST00000570874 TMEM229BQ8NBD8 167 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 OR1N2Q8NGR9 330 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 OR51E1Q8TCB6 317 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 SECTM1Q8WVN6 248 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 SLC35E1Q96K37 410 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 ANAPC13Q9BS18 74 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 REG4Q9BYZ8 158 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 OR2H1Q9GZK4 316 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 OR2J1Q9GZK6 312 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 CHST6Q9GZX3 395 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 Q9HAA7 133 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 MTFP1Q9UDX5 166 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 HIGD1AQ9Y241 93 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 SPTBN2O15020 2390 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 CACNA1AO00555 2505 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 BSNQ9UPA5 3926 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 ZFHX4Q86UP3 3567 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 IGKV3D-15A0A087WSY6 115 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 TRAV8-4A0A0B4J246 113 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 IGKV1-9A0A0C4DH69 117 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 FAM236DA0A1B0GTK5 79 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 KANTRA0A1W2PQU2 76 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 MRPL33O75394 65 aaKnown RBP2.86□□□□□ -1.95
SMG6-208ENST00000570874 MPC2O95563 127 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 IGLV3-1P01715 115 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 P01737 135 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 CRYBA1P05813 215 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 CD2P06729 351 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 NMBP08949 121 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 MMP7P09237 267 aaPredicted RBP2.86□□□□□ -1.95
SMG6-208ENST00000570874 FAM236CP0DP71 79 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 CXCL3P19876 107 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 CRYGSP22914 178 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 PRTN3P24158 256 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 FKBP2P26885 142 aaKnown RBP2.86□□□□□ -1.95
SMG6-208ENST00000570874 PRSS3P35030 304 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 ADMP35318 185 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 RBMXP38159 391 aaKnown RBP2.86□□□□□ -1.95
SMG6-208ENST00000570874 APOC4P55056 127 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 RND3P61587 244 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 MEF2CQ06413 473 aaPredicted RBP2.86□□□□□ -1.95
SMG6-208ENST00000570874 RIGQ13278 110 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 KRTAP27-1Q3LI81 207 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 PRR30Q53SZ7 412 aaPredicted RBP2.86□□□□□ -1.95
SMG6-208ENST00000570874 TMEM255AQ5JRV8 349 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 PIK3CD-AS1Q5SR53 167 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 GLYATL3Q5SZD4 288 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 FAM27BQ5VT28 67 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 GLT8D1Q68CQ7 371 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 FAAP20Q6NZ36 180 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 LYPD6Q86Y78 171 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 SLC22A24Q8N4F4 322 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 KCNRGQ8N5I3 272 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 ZDHHC22Q8N966 263 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 C9orf106Q8NAJ2 232 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 TMEM178AQ8NBL3 297 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 SYT8Q8NBV8 401 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 SRSF12Q8WXF0 261 aaKnown RBP2.86□□□□□ -1.95
SMG6-208ENST00000570874 PP6455Q8WZ26 134 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 FMC1Q96HJ9 113 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 SPATA25Q9BR10 227 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 C1QTNF4Q9BXJ3 329 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 FGF23Q9GZV9 251 aaPredicted RBP2.86□□□□□ -1.95
SMG6-208ENST00000570874 CLCF1Q9UBD9 225 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 CKLFQ9UBR5 152 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 LAMTOR3Q9UHA4 124 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 PAM16Q9Y3D7 125 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 ARHGAP32A7KAX9 2087 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 APC2O95996 2303 aa2.86□□□□□ -1.95
SMG6-208ENST00000570874 IGKV1-27A0A075B6S5 117 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 A0A087WZ39 114 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 TRAV5A0A0B4J249 113 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 TRAV17A0A0B4J275 112 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 A0A0B4J2A0 478 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 PIGBOS1A0A0B4J2F0 54 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 GGT3PA6NGU5 568 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 NCBP2LA6PVI3 153 aaKnown RBP2.85□□□□□ -1.95
SMG6-208ENST00000570874 ZNF724A8MTY0 619 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.85□□□□□ -1.95
SMG6-208ENST00000570874 M0R135 149 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 SLC17A2O00624 439 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms