RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 ICAM4Q14773 271 aa17.84■□□□□ 0.45
VCPKMT-205ENST00000569518 HAGHQ16775 308 aa17.84■□□□□ 0.45
VCPKMT-205ENST00000569518 ASPHD1Q5U4P2 390 aa17.84■□□□□ 0.45
VCPKMT-205ENST00000569518 PRSS57Q6UWY2 283 aa17.84■□□□□ 0.45
VCPKMT-205ENST00000569518 NPIPB3Q92617 1050 aa17.84■□□□□ 0.45
VCPKMT-205ENST00000569518 IGKV1D-37A0A075B6S9 117 aa17.83■□□□□ 0.44
VCPKMT-205ENST00000569518 IGHV7-81A0A0B4J1V7 117 aa17.83■□□□□ 0.44
VCPKMT-205ENST00000569518 HMGB3O15347 200 aaKnown RBP17.83■□□□□ 0.44
VCPKMT-205ENST00000569518 IGHV3-48P01763 117 aa17.83■□□□□ 0.44
VCPKMT-205ENST00000569518 PPT1P50897 306 aa17.83■□□□□ 0.44
VCPKMT-205ENST00000569518 MAPK1IP1LQ8NDC0 245 aa17.83■□□□□ 0.44
VCPKMT-205ENST00000569518 WNT10AQ9GZT5 417 aa17.83■□□□□ 0.44
VCPKMT-205ENST00000569518 GNG13Q9P2W3 67 aa17.83■□□□□ 0.44
VCPKMT-205ENST00000569518 ABCA1O95477 2261 aa17.83■□□□□ 0.44
VCPKMT-205ENST00000569518 LOC102723971A0A1B0GUV8 181 aa17.82■□□□□ 0.44
VCPKMT-205ENST00000569518 J3QLI3 93 aa17.82■□□□□ 0.44
VCPKMT-205ENST00000569518 RND2P52198 227 aa17.82■□□□□ 0.44
VCPKMT-205ENST00000569518 TMEM249Q2WGJ8 235 aa17.82■□□□□ 0.44
VCPKMT-205ENST00000569518 SLC25A33Q9BSK2 321 aa17.82■□□□□ 0.44
VCPKMT-205ENST00000569518 NPIPB5A8MRT5 1133 aa17.82■□□□□ 0.44
VCPKMT-205ENST00000569518 SCO1O75880 301 aa17.82■□□□□ 0.44
VCPKMT-205ENST00000569518 BCL2P10415 239 aa17.82■□□□□ 0.44
VCPKMT-205ENST00000569518 EGR2P11161 476 aaPredicted RBP17.82■□□□□ 0.44
VCPKMT-205ENST00000569518 TMEM116Q8NCL8 245 aa17.82■□□□□ 0.44
VCPKMT-205ENST00000569518 CELSR1Q9NYQ6 3014 aa17.81■□□□□ 0.44
VCPKMT-205ENST00000569518 I3L2K1 104 aa17.81■□□□□ 0.44
VCPKMT-205ENST00000569518 MT-CO2P00403 227 aa17.81■□□□□ 0.44
VCPKMT-205ENST00000569518 IGHV4-31P0DP07 118 aa17.81■□□□□ 0.44
VCPKMT-205ENST00000569518 GUCA2BQ16661 112 aa17.81■□□□□ 0.44
VCPKMT-205ENST00000569518 KHDC3LQ587J8 217 aa17.81■□□□□ 0.44
VCPKMT-205ENST00000569518 CYP2G1PQ6ZSU1 146 aa17.81■□□□□ 0.44
VCPKMT-205ENST00000569518 SLC35B3Q9H1N7 401 aa17.81■□□□□ 0.44
VCPKMT-205ENST00000569518 SOX21Q9Y651 276 aaPredicted RBP17.81■□□□□ 0.44
VCPKMT-205ENST00000569518 OR1L6Q8NGR2 347 aa17.8■□□□□ 0.44
VCPKMT-205ENST00000569518 RASL11BQ9BPW5 248 aa17.8■□□□□ 0.44
VCPKMT-205ENST00000569518 HSPB9Q9BQS6 159 aa17.8■□□□□ 0.44
VCPKMT-205ENST00000569518 A0A1W2PPV4 95 aa17.79■□□□□ 0.44
VCPKMT-205ENST00000569518 HSPB1P04792 205 aaKnown RBP17.79■□□□□ 0.44
VCPKMT-205ENST00000569518 GATA2P23769 480 aaPredicted RBP17.79■□□□□ 0.44
VCPKMT-205ENST00000569518 DEFA5Q01523 94 aa17.79■□□□□ 0.44
VCPKMT-205ENST00000569518 TTC9CQ8N5M4 171 aa17.79■□□□□ 0.44
VCPKMT-205ENST00000569518 Q96MF0 132 aa17.79■□□□□ 0.44
VCPKMT-205ENST00000569518 RBM14Q96PK6 669 aaKnown RBP17.79■□□□□ 0.44
VCPKMT-205ENST00000569518 TMPRSS5Q9H3S3 457 aa17.79■□□□□ 0.44
VCPKMT-205ENST00000569518 NBPF19A0A087WUL8 3843 aa17.79■□□□□ 0.44
VCPKMT-205ENST00000569518 TCRBV4S1A1TA0A5B7 111 aa17.79■□□□□ 0.44
VCPKMT-205ENST00000569518 ZFP92A6NM28 416 aa17.79■□□□□ 0.44
VCPKMT-205ENST00000569518 TGFAP01135 160 aa17.79■□□□□ 0.44
VCPKMT-205ENST00000569518 C5orf56Q8N8D9 126 aa17.79■□□□□ 0.44
VCPKMT-205ENST00000569518 SEPSECSQ9HD40 501 aaKnown RBP17.79■□□□□ 0.44
VCPKMT-205ENST00000569518 ZANQ9Y493 2812 aa17.78■□□□□ 0.44
VCPKMT-205ENST00000569518 TSPAN9O75954 239 aa17.78■□□□□ 0.44
VCPKMT-205ENST00000569518 SRP19P09132 144 aaKnown RBP17.78■□□□□ 0.44
VCPKMT-205ENST00000569518 STAG3L2P0CL84 134 aa17.78■□□□□ 0.44
VCPKMT-205ENST00000569518 STAG3L3P0CL85 134 aa17.78■□□□□ 0.44
VCPKMT-205ENST00000569518 RHOBP62745 196 aa17.78■□□□□ 0.44
VCPKMT-205ENST00000569518 ATRAIDQ6UW56 229 aa17.78■□□□□ 0.44
VCPKMT-205ENST00000569518 SVBPQ8N300 66 aa17.78■□□□□ 0.44
VCPKMT-205ENST00000569518 RXFP4Q8TDU9 374 aa17.78■□□□□ 0.44
VCPKMT-205ENST00000569518 CREBBPQ92793 2442 aa17.78■□□□□ 0.44
VCPKMT-205ENST00000569518 PSMB11A5LHX3 300 aa17.77■□□□□ 0.44
VCPKMT-205ENST00000569518 K7EIM0 57 aa17.77■□□□□ 0.44
VCPKMT-205ENST00000569518 FBP1P09467 338 aa17.77■□□□□ 0.44
VCPKMT-205ENST00000569518 C22orf15Q8WYQ4 148 aa17.77■□□□□ 0.44
VCPKMT-205ENST00000569518 TRGV9Q99603 122 aa17.77■□□□□ 0.44
VCPKMT-205ENST00000569518 SSX3Q99909 188 aa17.77■□□□□ 0.44
VCPKMT-205ENST00000569518 MOB4Q9Y3A3 225 aa17.77■□□□□ 0.44
VCPKMT-205ENST00000569518 IGHV3-21A0A0B4J1V1 117 aa17.77■□□□□ 0.43
VCPKMT-205ENST00000569518 IFNA1P01562 189 aa17.77■□□□□ 0.43
VCPKMT-205ENST00000569518 ZNF90Q03938 601 aa17.77■□□□□ 0.43
VCPKMT-205ENST00000569518 SPATA31B1PQ5VZV4 182 aa17.77■□□□□ 0.43
VCPKMT-205ENST00000569518 TMEM219Q86XT9 240 aa17.77■□□□□ 0.43
VCPKMT-205ENST00000569518 FANCD2OSQ96PS1 177 aa17.77■□□□□ 0.43
VCPKMT-205ENST00000569518 PRRC2AP48634 2157 aaKnown RBP17.77■□□□□ 0.43
VCPKMT-205ENST00000569518 IGLV11-55A0A075B6I3 123 aa17.76■□□□□ 0.43
VCPKMT-205ENST00000569518 SELENOTP62341 195 aa17.76■□□□□ 0.43
VCPKMT-205ENST00000569518 RBMS3Q6XE24 437 aaKnown RBP17.76■□□□□ 0.43
VCPKMT-205ENST00000569518 SLC35E3Q7Z769 313 aa17.76■□□□□ 0.43
VCPKMT-205ENST00000569518 C19orf24Q9BVV8 132 aa17.76■□□□□ 0.43
VCPKMT-205ENST00000569518 VAX2Q9UIW0 290 aa17.76■□□□□ 0.43
VCPKMT-205ENST00000569518 AMY1AP04745 511 aa17.75■□□□□ 0.43
VCPKMT-205ENST00000569518 OR5G3P0C626 314 aa17.75■□□□□ 0.43
VCPKMT-205ENST00000569518 OR4X1Q8NH49 305 aa17.75■□□□□ 0.43
VCPKMT-205ENST00000569518 SGMS2Q8NHU3 365 aa17.75■□□□□ 0.43
VCPKMT-205ENST00000569518 MANBALQ9NQG1 85 aa17.75■□□□□ 0.43
VCPKMT-205ENST00000569518 TNFRSF19Q9NS68 423 aa17.75■□□□□ 0.43
VCPKMT-205ENST00000569518 GCN1Q92616 2671 aaKnown RBP17.75■□□□□ 0.43
VCPKMT-205ENST00000569518 ARL14EPLP0DKL9 152 aa17.75■□□□□ 0.43
VCPKMT-205ENST00000569518 PSMB3P49720 205 aa17.75■□□□□ 0.43
VCPKMT-205ENST00000569518 FUT9Q9Y231 359 aa17.75■□□□□ 0.43
VCPKMT-205ENST00000569518 CSPG4Q6UVK1 2322 aa17.74■□□□□ 0.43
VCPKMT-205ENST00000569518 CXorf1O96002 111 aa17.74■□□□□ 0.43
VCPKMT-205ENST00000569518 FSHBP01225 129 aa17.74■□□□□ 0.43
VCPKMT-205ENST00000569518 BPIFB3P59826 476 aa17.74■□□□□ 0.43
VCPKMT-205ENST00000569518 TMEM37Q8WXS4 190 aa17.74■□□□□ 0.43
VCPKMT-205ENST00000569518 A6NDX4 124 aa17.73■□□□□ 0.43
VCPKMT-205ENST00000569518 ATP6V0E1O15342 81 aa17.73■□□□□ 0.43
VCPKMT-205ENST00000569518 TAGLN2P37802 199 aaKnown RBP17.73■□□□□ 0.43
VCPKMT-205ENST00000569518 FAM78BQ5VT40 261 aa17.73■□□□□ 0.43
VCPKMT-205ENST00000569518 SPNS3Q6ZMD2 512 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms