RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 GPHA2Q96T91 129 aa6.1□□□□□ -1.43
SMG1-216ENST00000569122 C7orf50Q9BRJ6 194 aaKnown RBP6.1□□□□□ -1.43
SMG1-216ENST00000569122 ZFAND3Q9H8U3 227 aa6.1□□□□□ -1.43
SMG1-216ENST00000569122 ACOT13Q9NPJ3 140 aa6.1□□□□□ -1.43
SMG1-216ENST00000569122 C8orf4Q9NR00 106 aa6.1□□□□□ -1.43
SMG1-216ENST00000569122 YTHDF2Q9Y5A9 579 aaKnown RBP6.1□□□□□ -1.43
SMG1-216ENST00000569122 HLA-DRB4X5D2U9 266 aa6.1□□□□□ -1.43
SMG1-216ENST00000569122 LOC102723971A0A1B0GUV8 181 aa6.09□□□□□ -1.43
SMG1-216ENST00000569122 IFITM5A6NNB3 132 aa6.09□□□□□ -1.43
SMG1-216ENST00000569122 LYRM9A8MSI8 78 aa6.09□□□□□ -1.43
SMG1-216ENST00000569122 KRASP01116 189 aa6.09□□□□□ -1.43
SMG1-216ENST00000569122 SNCAP37840 140 aa6.09□□□□□ -1.43
SMG1-216ENST00000569122 NKX2-1P43699 371 aaPredicted RBP6.09□□□□□ -1.43
SMG1-216ENST00000569122 SUB1P53999 127 aaKnown RBP eCLIP6.09□□□□□ -1.43
SMG1-216ENST00000569122 RPS25P62851 125 aaKnown RBP6.09□□□□□ -1.43
SMG1-216ENST00000569122 SPATA31B1PQ5VZV4 182 aa6.09□□□□□ -1.43
SMG1-216ENST00000569122 TMEM91Q6ZNR0 172 aa6.09□□□□□ -1.43
SMG1-216ENST00000569122 CMTM1Q8IZ96 169 aa6.09□□□□□ -1.43
SMG1-216ENST00000569122 C8orf59Q8N0T1 100 aaPredicted RBP6.09□□□□□ -1.43
SMG1-216ENST00000569122 DHRSXQ8N5I4 330 aa6.09□□□□□ -1.43
SMG1-216ENST00000569122 BPIFB6Q8NFQ5 453 aa6.09□□□□□ -1.43
SMG1-216ENST00000569122 CLUHP3Q96NS8 147 aa6.09□□□□□ -1.43
SMG1-216ENST00000569122 AGRNO00468 2067 aa6.08□□□□□ -1.44
SMG1-216ENST00000569122 TRAV30A0A087WSZ9 112 aa6.08□□□□□ -1.44
SMG1-216ENST00000569122 FAM90A26D6RGX4 464 aa6.08□□□□□ -1.44
SMG1-216ENST00000569122 IGHV3-48P01763 117 aa6.08□□□□□ -1.44
SMG1-216ENST00000569122 XGP55808 180 aa6.08□□□□□ -1.44
SMG1-216ENST00000569122 Q6ZSN1 163 aa6.08□□□□□ -1.44
SMG1-216ENST00000569122 SSX7Q7RTT5 188 aa6.08□□□□□ -1.44
SMG1-216ENST00000569122 PQLC1Q8N2U9 271 aa6.08□□□□□ -1.44
SMG1-216ENST00000569122 OR4A16Q8NH70 328 aa6.08□□□□□ -1.44
SMG1-216ENST00000569122 MAGT1Q9H0U3 335 aa6.08□□□□□ -1.44
SMG1-216ENST00000569122 Q9H3A6 140 aa6.08□□□□□ -1.44
SMG1-216ENST00000569122 NRN1Q9NPD7 142 aa6.08□□□□□ -1.44
SMG1-216ENST00000569122 PFDN2Q9UHV9 154 aa6.08□□□□□ -1.44
SMG1-216ENST00000569122 NSG2Q9Y328 171 aa6.08□□□□□ -1.44
SMG1-216ENST00000569122 LINC00588Q9Y4M8 146 aa6.08□□□□□ -1.44
SMG1-216ENST00000569122 TRAV1-2A0A0B4J238 106 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 A0A1B0GU03 582 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 F5H768 121 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 GSTZ1O43708 216 aaPredicted RBP6.07□□□□□ -1.44
SMG1-216ENST00000569122 CLN5O75503 358 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 HNRNPCP07910 306 aaKnown RBP eCLIP6.07□□□□□ -1.449e-7■□□□□ 9.1
SMG1-216ENST00000569122 HSMCR30P0CW71 290 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 MYL9P24844 172 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 S100GP29377 79 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 G6PCP35575 357 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 NUP62P37198 522 aaPredicted RBP6.07□□□□□ -1.44
SMG1-216ENST00000569122 ID1P41134 155 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 LPAR6P43657 344 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 FXYD4P59646 89 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 HERV-K104P61576 105 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 B2MP61769 119 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 PRCDQ00LT1 54 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 C16orf54Q6UWD8 224 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 ZNF818PQ6ZRF7 136 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 BEST4Q8NFU0 473 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 LGALS14Q8TCE9 139 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 Q8WTZ3 238 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 NUDCD2Q8WVJ2 157 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 ZNF503Q96F45 646 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 C17orf77Q96MU5 243 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 TMEM208Q9BTX3 173 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 SCPEP1Q9HB40 452 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 FKBP14Q9NWM8 211 aa6.07□□□□□ -1.44
SMG1-216ENST00000569122 ELF5Q9UKW6 265 aaPredicted RBP6.07□□□□□ -1.44
SMG1-216ENST00000569122 TMEM235A6NFC5 223 aa6.06□□□□□ -1.44
SMG1-216ENST00000569122 PTGES3LE9PB15 166 aa6.06□□□□□ -1.44
SMG1-216ENST00000569122 ATP5G1P05496 136 aa6.06□□□□□ -1.44
SMG1-216ENST00000569122 ATP5G3P48201 142 aa6.06□□□□□ -1.44
SMG1-216ENST00000569122 ERVFC1-1P60608 527 aa6.06□□□□□ -1.44
SMG1-216ENST00000569122 HSPE1P61604 102 aaKnown RBP6.06□□□□□ -1.44
SMG1-216ENST00000569122 PSG9Q00887 426 aa6.06□□□□□ -1.44
SMG1-216ENST00000569122 RNASE12Q5GAN4 147 aaKnown RBP6.06□□□□□ -1.44
SMG1-216ENST00000569122 FOXI2Q6ZQN5 318 aa6.06□□□□□ -1.44
SMG1-216ENST00000569122 H2BFWTQ7Z2G1 175 aa6.06□□□□□ -1.44
SMG1-216ENST00000569122 PACRGLQ8N7B6 248 aa6.06□□□□□ -1.44
SMG1-216ENST00000569122 OR4X1Q8NH49 305 aa6.06□□□□□ -1.44
SMG1-216ENST00000569122 FCAMRQ8WWV6 532 aa6.06□□□□□ -1.44
SMG1-216ENST00000569122 S100A14Q9HCY8 104 aa6.06□□□□□ -1.44
SMG1-216ENST00000569122 FAM212BQ9NTI7 297 aaPredicted RBP6.06□□□□□ -1.44
SMG1-216ENST00000569122 SCN3BQ9NY72 215 aa6.06□□□□□ -1.44
SMG1-216ENST00000569122 LSM2Q9Y333 95 aaKnown RBP6.06□□□□□ -1.44
SMG1-216ENST00000569122 U3KQE9 123 aa6.06□□□□□ -1.44
SMG1-216ENST00000569122 CBY3A6NI87 242 aa6.05□□□□□ -1.44
SMG1-216ENST00000569122 M0QYG6 137 aa6.05□□□□□ -1.44
SMG1-216ENST00000569122 PGLYRP1O75594 196 aaPredicted RBP6.05□□□□□ -1.44
SMG1-216ENST00000569122 RAB3BP20337 219 aa6.05□□□□□ -1.44
SMG1-216ENST00000569122 CBX5P45973 191 aa6.05□□□□□ -1.44
SMG1-216ENST00000569122 RPL5P46777 297 aaKnown RBP6.05□□□□□ -1.44
SMG1-216ENST00000569122 HSPA13P48723 471 aa6.05□□□□□ -1.44
SMG1-216ENST00000569122 PPP5CP53041 499 aa6.05□□□□□ -1.44
SMG1-216ENST00000569122 MLLT11Q13015 90 aaPredicted RBP6.05□□□□□ -1.44
SMG1-216ENST00000569122 ICAM4Q14773 271 aa6.05□□□□□ -1.44
SMG1-216ENST00000569122 SAMD13Q5VXD3 122 aa6.05□□□□□ -1.44
SMG1-216ENST00000569122 EBLN2Q6P2I7 272 aa6.05□□□□□ -1.44
SMG1-216ENST00000569122 SIGLEC15Q6ZMC9 328 aa6.05□□□□□ -1.44
SMG1-216ENST00000569122 TMEM17Q86X19 198 aa6.05□□□□□ -1.44
SMG1-216ENST00000569122 HOGA1Q86XE5 327 aa6.05□□□□□ -1.44
SMG1-216ENST00000569122 OR4B1Q8NGF8 309 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms