RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, human

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-223	ENST00000568566	NECAP1	Q8NC96	275 aa		6.37	□□□□□ -1.39
TSC2-223	ENST00000568566	OR4D5	Q8NGN0	318 aa		6.37	□□□□□ -1.39
TSC2-223	ENST00000568566	ZNF502	Q8TBZ5	544 aa		6.37	□□□□□ -1.39
TSC2-223	ENST00000568566	SCARB1	Q8WTV0	552 aa		6.37	□□□□□ -1.39
TSC2-223	ENST00000568566	ZMAT4	Q9H898	229 aa		6.37	□□□□□ -1.39
TSC2-223	ENST00000568566	FKBP11	Q9NYL4	201 aa		6.37	□□□□□ -1.39
TSC2-223	ENST00000568566	GSKIP	Q9P0R6	139 aa		6.37	□□□□□ -1.39
TSC2-223	ENST00000568566	ALG5	Q9Y673	324 aa		6.37	□□□□□ -1.39
TSC2-223	ENST00000568566	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	LINC01619	G3V211	115 aa		6.36	□□□□□ -1.39
TSC2-223	ENST00000568566		H3BP45	60 aa		6.36	□□□□□ -1.39
TSC2-223	ENST00000568566		H3BUA1	57 aa		6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	WRB	O00258	174 aa		6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	SSNA1	O43805	119 aa		6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	ATG12	O94817	140 aa		6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	SCGB1D2	O95969	90 aa		6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	MBP	P02686	304 aa	Predicted RBP	6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	HSPB1	P04792	205 aa	Known RBP	6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	CLEC3B	P05452	202 aa		6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	FGF2	P09038	288 aa		6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	GPR183	P32249	361 aa		6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	ID3	Q02535	119 aa		6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	ZNF616	Q08AN1	781 aa		6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	IAH1	Q2TAA2	248 aa	Predicted RBP	6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	OR52E5	Q8NH55	327 aa		6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	COQ8A	Q8NI60	647 aa		6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	PINX1	Q96BK5	328 aa	Known RBP	6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	BSCL2	Q96G97	398 aa	Predicted RBP	6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	SRSF8	Q9BRL6	282 aa	Known RBP	6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	C11orf1	Q9H5F2	150 aa		6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	SLA2	Q9H6Q3	261 aa		6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	HEYL	Q9NQ87	328 aa	Predicted RBP	6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	PEF1	Q9UBV8	284 aa	Known RBP	6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	TMED3	Q9Y3Q3	217 aa		6.36	□□□□□ -1.39
TSC2-223	ENST00000568566	HERC2	O95714	4834 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	DUXB	A0A1W2PPF3	345 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	OR2T8	A6NH00	312 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	FAM223B	A6NKX1	122 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	INS-IGF2	F8WCM5	200 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	GOSR2	O14653	212 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	CXCL3	P19876	107 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	H2BFS	P57053	126 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	SYNJ2BP	P57105	145 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	ERH	P84090	104 aa	Known RBP	6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	ARL16	Q0P5N6	197 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	KLF5	Q13887	457 aa	Predicted RBP	6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	FCN2	Q15485	313 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	UNQ9165/PRO28630	Q6UXU0	137 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	GSG1L	Q6UXU4	331 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	FAM223A	Q8IWN6	122 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	ZNF114	Q8NC26	417 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	OR1P1	Q8NH06	330 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	DTD1	Q8TEA8	209 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	CACNG8	Q8WXS5	425 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	USMG5	Q96IX5	58 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	NEURL2	Q9BR09	285 aa		6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	RCL1	Q9Y2P8	373 aa	Known RBP	6.35	□□□□□ -1.39
TSC2-223	ENST00000568566	C5orf51	A6NDU8	294 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566		H0YIZ8	118 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	ZNF207	O43670	478 aa	Known RBP	6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	SYNGR2	O43760	224 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	SSSCA1	O60232	199 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	SAP30	O75446	220 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	CTSG	P08311	255 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	SLC25A6	P12236	298 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	SNCA	P37840	140 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	INSL3	P51460	131 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	CYCS	P99999	105 aa	Known RBP	6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	TM4SF20	Q53R12	229 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	C2orf83	Q53S99	150 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566		Q5BKY6	102 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	THOC7	Q6I9Y2	204 aa	Known RBP	6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	TCTE3	Q8IZS6	198 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	UBAC2	Q8NBM4	344 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	SLC24A4	Q8NFF2	622 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	OR11H7	Q8NGC8	314 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	PDCD10	Q9BUL8	212 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	EDA2R	Q9HAV5	297 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	ENY2	Q9NPA8	101 aa		6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	PAIP2B	Q9ULR5	123 aa	Known RBP	6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	LSM5	Q9Y4Y9	91 aa	Known RBP	6.34	□□□□□ -1.39
TSC2-223	ENST00000568566	PCLO	Q9Y6V0	5065 aa		6.34	□□□□□ -1.4
TSC2-223	ENST00000568566	IGHV3-49	A0A0A0MS15	119 aa		6.33	□□□□□ -1.4
TSC2-223	ENST00000568566		A0A0G2JLM5	398 aa		6.33	□□□□□ -1.4
TSC2-223	ENST00000568566	IZUMO1R	A6ND01	250 aa		6.33	□□□□□ -1.4
TSC2-223	ENST00000568566	FAM24A	A6NFZ4	105 aa		6.33	□□□□□ -1.4
TSC2-223	ENST00000568566	PMS2P5	A8MQ11	134 aa		6.33	□□□□□ -1.4
TSC2-223	ENST00000568566	PRSS46	E5RG02	174 aa		6.33	□□□□□ -1.4
TSC2-223	ENST00000568566		K7EPK0	472 aa		6.33	□□□□□ -1.4
TSC2-223	ENST00000568566	OVOL1	O14753	267 aa		6.33	□□□□□ -1.4
TSC2-223	ENST00000568566	JTB	O76095	146 aa		6.33	□□□□□ -1.4
TSC2-223	ENST00000568566	IFNA10	P01566	189 aa		6.33	□□□□□ -1.4
TSC2-223	ENST00000568566	IFNA21	P01568	189 aa		6.33	□□□□□ -1.4
TSC2-223	ENST00000568566	CSN3	P07498	182 aa		6.33	□□□□□ -1.4
TSC2-223	ENST00000568566	HNRNPC	P07910	306 aa	Known RBP eCLIP	6.33	□□□□□ -1.4
TSC2-223	ENST00000568566	GIP	P09681	153 aa	Predicted RBP	6.33	□□□□□ -1.4
TSC2-223	ENST00000568566	OR8U8	P0C7N1	319 aa		6.33	□□□□□ -1.4
TSC2-223	ENST00000568566	GP9	P14770	177 aa		6.33	□□□□□ -1.4
TSC2-223	ENST00000568566	HIST1H1B	P16401	226 aa	Known RBP	6.33	□□□□□ -1.4
TSC2-223	ENST00000568566	NPY1R	P25929	384 aa		6.33	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms