RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, human

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-222	ENST00000568454	GAGE2D	Q9UEU5	116 aa		13.86	□□□□□ -0.19
TSC2-222	ENST00000568454	FOXH1	O75593	365 aa		13.86	□□□□□ -0.19
TSC2-222	ENST00000568454	AGMAT	Q9BSE5	352 aa		13.86	□□□□□ -0.19
TSC2-222	ENST00000568454	ATAD5	Q96QE3	1844 aa		13.86	□□□□□ -0.19
TSC2-222	ENST00000568454	ASXL3	Q9C0F0	2248 aa		13.86	□□□□□ -0.19
TSC2-222	ENST00000568454	SAA2-SAA4	A0A096LPE2	208 aa		13.86	□□□□□ -0.19
TSC2-222	ENST00000568454	SAA2	P0DJI9	122 aa	Predicted RBP	13.86	□□□□□ -0.19
TSC2-222	ENST00000568454	IGHV3-49	A0A0A0MS15	119 aa		13.86	□□□□□ -0.19
TSC2-222	ENST00000568454	IGHV3-66	A0A0C4DH42	116 aa		13.86	□□□□□ -0.19
TSC2-222	ENST00000568454		A0A0G2JLM5	398 aa		13.86	□□□□□ -0.19
TSC2-222	ENST00000568454	PYY	P10082	97 aa		13.86	□□□□□ -0.19
TSC2-222	ENST00000568454	PRCD	Q00LT1	54 aa		13.86	□□□□□ -0.19
TSC2-222	ENST00000568454	ZFAND6	Q6FIF0	208 aa		13.86	□□□□□ -0.19
TSC2-222	ENST00000568454	PPP1R27	Q86WC6	154 aa		13.86	□□□□□ -0.19
TSC2-222	ENST00000568454	LYZL4	Q96KX0	146 aa		13.86	□□□□□ -0.19
TSC2-222	ENST00000568454	UNC13C	Q8NB66	2214 aa		13.86	□□□□□ -0.19
TSC2-222	ENST00000568454	NRXN2	Q9P2S2	1712 aa		13.86	□□□□□ -0.19
TSC2-222	ENST00000568454	FAM71F2	Q6NXP2	309 aa		13.85	□□□□□ -0.19
TSC2-222	ENST00000568454	LINC01551	Q86U37	167 aa		13.85	□□□□□ -0.19
TSC2-222	ENST00000568454		S4R3C0	116 aa		13.85	□□□□□ -0.19
TSC2-222	ENST00000568454		A0A087WV48	116 aa		13.85	□□□□□ -0.19
TSC2-222	ENST00000568454	IGKV1D-33	P01593	117 aa		13.85	□□□□□ -0.19
TSC2-222	ENST00000568454	IGKV1-33	P01594	117 aa		13.85	□□□□□ -0.19
TSC2-222	ENST00000568454	UBE2V1	Q13404	147 aa		13.85	□□□□□ -0.19
TSC2-222	ENST00000568454	LOXL4	Q96JB6	756 aa		13.85	□□□□□ -0.19
TSC2-222	ENST00000568454	SPAG8	Q99932	426 aa	Predicted RBP	13.85	□□□□□ -0.19
TSC2-222	ENST00000568454	PGPEP1	Q9NXJ5	209 aa		13.85	□□□□□ -0.19
TSC2-222	ENST00000568454	PLXNB2	O15031	1838 aa		13.85	□□□□□ -0.19
TSC2-222	ENST00000568454	IGKV1D-8	A0A087WSZ0	117 aa		13.85	□□□□□ -0.19
TSC2-222	ENST00000568454		A0A1W2PR77	199 aa		13.85	□□□□□ -0.19
TSC2-222	ENST00000568454	RAMP3	O60896	148 aa		13.85	□□□□□ -0.19
TSC2-222	ENST00000568454	SLC25A48	Q6ZT89	311 aa	Known RBP	13.85	□□□□□ -0.19
TSC2-222	ENST00000568454	RNF125	Q96EQ8	232 aa		13.84	□□□□□ -0.19
TSC2-222	ENST00000568454		F2Z2F3	143 aa		13.84	□□□□□ -0.19
TSC2-222	ENST00000568454	NDUFS6	O75380	124 aa	Known RBP	13.84	□□□□□ -0.19
TSC2-222	ENST00000568454	TIAF1	O95411	115 aa		13.84	□□□□□ -0.19
TSC2-222	ENST00000568454	EFEMP2	O95967	443 aa		13.84	□□□□□ -0.19
TSC2-222	ENST00000568454	SUPT4H1	P63272	117 aa	Known RBP	13.84	□□□□□ -0.19
TSC2-222	ENST00000568454	FGF11	Q92914	225 aa		13.84	□□□□□ -0.19
TSC2-222	ENST00000568454	OTOF	Q9HC10	1997 aa		13.84	□□□□□ -0.19
TSC2-222	ENST00000568454	APOBEC3A	P31941	199 aa	Predicted RBP	13.84	□□□□□ -0.19
TSC2-222	ENST00000568454	RNASE4	P34096	147 aa	Known RBP	13.84	□□□□□ -0.19
TSC2-222	ENST00000568454	JMJD8	Q96S16	334 aa		13.84	□□□□□ -0.19
TSC2-222	ENST00000568454	LY96	Q9Y6Y9	160 aa		13.84	□□□□□ -0.19
TSC2-222	ENST00000568454	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.84	□□□□□ -0.19
TSC2-222	ENST00000568454	MORN2	Q502X0	79 aa		13.84	□□□□□ -0.19
TSC2-222	ENST00000568454	TOMM7	Q9P0U1	55 aa		13.83	□□□□□ -0.19
TSC2-222	ENST00000568454	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.83	□□□□□ -0.19
TSC2-222	ENST00000568454	SLC25A15	Q9Y619	301 aa		13.83	□□□□□ -0.19
TSC2-222	ENST00000568454	TDRD15	B5MCY1	1934 aa	Known RBP	13.83	□□□□□ -0.2
TSC2-222	ENST00000568454	ATXN8	Q156A1	80 aa		13.83	□□□□□ -0.2
TSC2-222	ENST00000568454	ZNF837	Q96EG3	531 aa	Predicted RBP	13.83	□□□□□ -0.2
TSC2-222	ENST00000568454	ICE1	Q9Y2F5	2266 aa		13.83	□□□□□ -0.2
TSC2-222	ENST00000568454	TAF1L	Q8IZX4	1826 aa		13.83	□□□□□ -0.2
TSC2-222	ENST00000568454	SRSF4	Q08170	494 aa	Known RBP	13.83	□□□□□ -0.2
TSC2-222	ENST00000568454	DUX3	Q96PT4	197 aa		13.83	□□□□□ -0.2
TSC2-222	ENST00000568454	TRAV2	A0A0B4J234	112 aa		13.83	□□□□□ -0.2
TSC2-222	ENST00000568454	SRSF6	Q13247	344 aa	Known RBP	13.83	□□□□□ -0.2
TSC2-222	ENST00000568454	UMOD	P07911	640 aa		13.82	□□□□□ -0.2
TSC2-222	ENST00000568454	TREML4	Q6UXN2	200 aa		13.82	□□□□□ -0.2
TSC2-222	ENST00000568454	KIR3DL3	Q8N743	410 aa		13.82	□□□□□ -0.2
TSC2-222	ENST00000568454	OR9G9	P0C7N8	305 aa		13.82	□□□□□ -0.2
TSC2-222	ENST00000568454	DUT	P33316	252 aa	Known RBP	13.82	□□□□□ -0.2
TSC2-222	ENST00000568454	ERG28	Q9UKR5	140 aa		13.82	□□□□□ -0.2
TSC2-222	ENST00000568454	ANKRD36	A6QL64	1941 aa		13.82	□□□□□ -0.2
TSC2-222	ENST00000568454	GGTLC1	Q9BX51	225 aa		13.82	□□□□□ -0.2
TSC2-222	ENST00000568454	TRAV12-3	A0A0B4J271	114 aa		13.82	□□□□□ -0.2
TSC2-222	ENST00000568454	FAM201A	Q5SY85	155 aa		13.82	□□□□□ -0.2
TSC2-222	ENST00000568454	MRPL27	Q9P0M9	148 aa	Known RBP	13.82	□□□□□ -0.2
TSC2-222	ENST00000568454	TRAV21	A0A0B4J279	112 aa		13.81	□□□□□ -0.2
TSC2-222	ENST00000568454	PDLIM4	P50479	330 aa		13.81	□□□□□ -0.2
TSC2-222	ENST00000568454	TMEM256	Q8N2U0	113 aa		13.81	□□□□□ -0.2
TSC2-222	ENST00000568454	CRIM1	Q9NZV1	1036 aa		13.81	□□□□□ -0.2
TSC2-222	ENST00000568454	BCL6B	Q8N143	479 aa	Predicted RBP	13.81	□□□□□ -0.2
TSC2-222	ENST00000568454	FAM186A	A6NE01	2351 aa		13.81	□□□□□ -0.2
TSC2-222	ENST00000568454	C3orf79	P0CE67	100 aa		13.81	□□□□□ -0.2
TSC2-222	ENST00000568454	ESD	P10768	282 aa		13.81	□□□□□ -0.2
TSC2-222	ENST00000568454	CLEC19A	Q6UXS0	136 aa		13.81	□□□□□ -0.2
TSC2-222	ENST00000568454	SBF2	Q86WG5	1849 aa		13.81	□□□□□ -0.2
TSC2-222	ENST00000568454	ZNF664	Q8N3J9	261 aa		13.81	□□□□□ -0.2
TSC2-222	ENST00000568454	WNK3	Q9BYP7	1800 aa		13.8	□□□□□ -0.2
TSC2-222	ENST00000568454	GREB1L	Q9C091	1923 aa	Predicted RBP	13.8	□□□□□ -0.2
TSC2-222	ENST00000568454	NBR2	O15453	112 aa		13.8	□□□□□ -0.2
TSC2-222	ENST00000568454	CELA3A	P09093	270 aa		13.8	□□□□□ -0.2
TSC2-222	ENST00000568454	TDGF1P3	P51864	188 aa		13.8	□□□□□ -0.2
TSC2-222	ENST00000568454	TPTE2P1	Q5T6R2	138 aa		13.8	□□□□□ -0.2
TSC2-222	ENST00000568454	PIKFYVE	Q9Y2I7	2098 aa		13.8	□□□□□ -0.2
TSC2-222	ENST00000568454	CABIN1	Q9Y6J0	2220 aa		13.8	□□□□□ -0.2
TSC2-222	ENST00000568454	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.8	□□□□□ -0.2
TSC2-222	ENST00000568454	ZNF319	Q9P2F9	582 aa		13.8	□□□□□ -0.2
TSC2-222	ENST00000568454	CFAP161	Q6P656	301 aa		13.8	□□□□□ -0.2
TSC2-222	ENST00000568454	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.8	□□□□□ -0.2
TSC2-222	ENST00000568454	RPP25L	Q8N5L8	163 aa	Known RBP	13.8	□□□□□ -0.2
TSC2-222	ENST00000568454	NPFFR1	Q9GZQ6	430 aa		13.8	□□□□□ -0.2
TSC2-222	ENST00000568454	IGLV3-32	A0A0A0MS00	114 aa		13.79	□□□□□ -0.2
TSC2-222	ENST00000568454	C8orf46	Q8TAG6	207 aa		13.79	□□□□□ -0.2
TSC2-222	ENST00000568454	SIGLEC12	Q96PQ1	595 aa		13.79	□□□□□ -0.2
TSC2-222	ENST00000568454	PLAUR	Q03405	335 aa		13.79	□□□□□ -0.2
TSC2-222	ENST00000568454	GUSBP1	Q15486	140 aa		13.79	□□□□□ -0.2
TSC2-222	ENST00000568454	MPV17L2	Q567V2	206 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms