RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 GSKIPQ9P0R6 139 aa9.78□□□□□ -0.84
TSC2-220ENST00000568238 ALG5Q9Y673 324 aa9.78□□□□□ -0.84
TSC2-220ENST00000568238 MFSD2BA6NFX1 497 aa9.77□□□□□ -0.85
TSC2-220ENST00000568238 PPP5D1E7EU14 171 aa9.77□□□□□ -0.85
TSC2-220ENST00000568238 INS-IGF2F8WCM5 200 aa9.77□□□□□ -0.85
TSC2-220ENST00000568238 GOSR2O14653 212 aa9.77□□□□□ -0.85
TSC2-220ENST00000568238 RNASE2P10153 161 aaKnown RBP9.77□□□□□ -0.85
TSC2-220ENST00000568238 ZNF114Q8NC26 417 aa9.77□□□□□ -0.85
TSC2-220ENST00000568238 OR4D5Q8NGN0 318 aa9.77□□□□□ -0.85
TSC2-220ENST00000568238 OR2K2Q8NGT1 345 aa9.77□□□□□ -0.85
TSC2-220ENST00000568238 HIPK2Q9H2X6 1198 aa9.77□□□□□ -0.85
TSC2-220ENST00000568238 C19orf73Q9NVV2 129 aa9.77□□□□□ -0.85
TSC2-220ENST00000568238 THYN1Q9P016 225 aa9.77□□□□□ -0.85
TSC2-220ENST00000568238 RYR2Q92736 4967 aa9.76□□□□□ -0.85
TSC2-220ENST00000568238 IZUMO1RA6ND01 250 aa9.76□□□□□ -0.85
TSC2-220ENST00000568238 FAM90A26D6RGX4 464 aa9.76□□□□□ -0.85
TSC2-220ENST00000568238 SSSCA1O60232 199 aa9.76□□□□□ -0.85
TSC2-220ENST00000568238 GGCTO75223 188 aaKnown RBP9.76□□□□□ -0.85
TSC2-220ENST00000568238 HTR2BP41595 481 aa9.76□□□□□ -0.85
TSC2-220ENST00000568238 NKX2-1P43699 371 aaPredicted RBP9.76□□□□□ -0.85
TSC2-220ENST00000568238 SUB1P53999 127 aaKnown RBP eCLIP9.76□□□□□ -0.85
TSC2-220ENST00000568238 KLK9Q2XQG4 91 aa9.76□□□□□ -0.85
TSC2-220ENST00000568238 GSG1LQ6UXU4 331 aa9.76□□□□□ -0.85
TSC2-220ENST00000568238 SLC24A4Q8NFF2 622 aa9.76□□□□□ -0.85
TSC2-220ENST00000568238 OR1L6Q8NGR2 347 aa9.76□□□□□ -0.85
TSC2-220ENST00000568238 DYNLRB2Q8TF09 96 aa9.76□□□□□ -0.85
TSC2-220ENST00000568238 EEF1AKMT3Q96AZ1 226 aa9.76□□□□□ -0.85
TSC2-220ENST00000568238 PINX1Q96BK5 328 aaKnown RBP9.76□□□□□ -0.85
TSC2-220ENST00000568238 KLK9Q9UKQ9 250 aa9.76□□□□□ -0.85
TSC2-220ENST00000568238 C7orf66A4D0T2 115 aa9.75□□□□□ -0.85
TSC2-220ENST00000568238 WRBO00258 174 aa9.75□□□□□ -0.85
TSC2-220ENST00000568238 SYNGR2O43760 224 aa9.75□□□□□ -0.85
TSC2-220ENST00000568238 MED6O75586 246 aa9.75□□□□□ -0.85
TSC2-220ENST00000568238 SIX6O95475 246 aa9.75□□□□□ -0.85
TSC2-220ENST00000568238 IFNA10P01566 189 aa9.75□□□□□ -0.85
TSC2-220ENST00000568238 IGHV3-48P01763 117 aa9.75□□□□□ -0.85
TSC2-220ENST00000568238 NPY1RP25929 384 aa9.75□□□□□ -0.85
TSC2-220ENST00000568238 POLR2GP62487 172 aaKnown RBP eCLIP9.75□□□□□ -0.85
TSC2-220ENST00000568238 OXA1LQ15070 435 aa9.75□□□□□ -0.85
TSC2-220ENST00000568238 BSXQ3C1V8 233 aa9.75□□□□□ -0.85
TSC2-220ENST00000568238 CASC10Q5T4H9 136 aa9.75□□□□□ -0.85
TSC2-220ENST00000568238 CXorf58Q96LI9 332 aa9.75□□□□□ -0.85
TSC2-220ENST00000568238 CCDC140Q96MF4 163 aa9.75□□□□□ -0.85
TSC2-220ENST00000568238 CITED4Q96RK1 184 aa9.75□□□□□ -0.85
TSC2-220ENST00000568238 TUBA4BQ9H853 241 aa9.75□□□□□ -0.85
TSC2-220ENST00000568238 C2orf70A6NJV1 201 aa9.74□□□□□ -0.85
TSC2-220ENST00000568238 I3L2K1 104 aa9.74□□□□□ -0.85
TSC2-220ENST00000568238 K7EIM0 57 aa9.74□□□□□ -0.85
TSC2-220ENST00000568238 MT-CO2P00403 227 aa9.74□□□□□ -0.85
TSC2-220ENST00000568238 ARL3P36405 182 aa9.74□□□□□ -0.85
TSC2-220ENST00000568238 CD81P60033 236 aa9.74□□□□□ -0.85
TSC2-220ENST00000568238 CD300EQ496F6 205 aaPredicted RBP9.74□□□□□ -0.85
TSC2-220ENST00000568238 CLEC19AQ6UXS0 136 aa9.74□□□□□ -0.85
TSC2-220ENST00000568238 ADAMTSL5Q6ZMM2 481 aa9.74□□□□□ -0.85
TSC2-220ENST00000568238 UBAC2Q8NBM4 344 aa9.74□□□□□ -0.85
TSC2-220ENST00000568238 ZNF502Q8TBZ5 544 aa9.74□□□□□ -0.85
TSC2-220ENST00000568238 TMEM170AQ8WVE7 144 aa9.74□□□□□ -0.85
TSC2-220ENST00000568238 C2orf50Q96LR7 162 aa9.74□□□□□ -0.85
TSC2-220ENST00000568238 SPATA25Q9BR10 227 aa9.74□□□□□ -0.85
TSC2-220ENST00000568238 ZC4H2Q9NQZ6 224 aa9.74□□□□□ -0.85
TSC2-220ENST00000568238 MGAT4CQ9UBM8 478 aa9.74□□□□□ -0.85
TSC2-220ENST00000568238 PAIP2BQ9ULR5 123 aaKnown RBP9.74□□□□□ -0.85
TSC2-220ENST00000568238 DNAH1Q9P2D7 4330 aa9.73□□□□□ -0.85
TSC2-220ENST00000568238 TRBV7-1A0A0A6YYK4 115 aa9.73□□□□□ -0.85
TSC2-220ENST00000568238 H3BP45 60 aa9.73□□□□□ -0.85
TSC2-220ENST00000568238 LGALS9O00182 355 aa9.73□□□□□ -0.85
TSC2-220ENST00000568238 OR2C1O95371 312 aa9.73□□□□□ -0.85
TSC2-220ENST00000568238 MBPP02686 304 aaPredicted RBP9.73□□□□□ -0.85
TSC2-220ENST00000568238 LYL1P12980 280 aa9.73□□□□□ -0.85
TSC2-220ENST00000568238 FOLR2P14207 255 aa9.73□□□□□ -0.85
TSC2-220ENST00000568238 GPR183P32249 361 aa9.73□□□□□ -0.85
TSC2-220ENST00000568238 OPRK1P41145 380 aa9.73□□□□□ -0.85
TSC2-220ENST00000568238 S100A10P60903 97 aa9.73□□□□□ -0.85
TSC2-220ENST00000568238 ID3Q02535 119 aa9.73□□□□□ -0.85
TSC2-220ENST00000568238 HAGHQ16775 308 aa9.73□□□□□ -0.85
TSC2-220ENST00000568238 C2orf83Q53S99 150 aa9.73□□□□□ -0.85
TSC2-220ENST00000568238 VN1R17PQ8TDU5 208 aa9.73□□□□□ -0.85
TSC2-220ENST00000568238 SCARB1Q8WTV0 552 aa9.73□□□□□ -0.85
TSC2-220ENST00000568238 CIB3Q96Q77 187 aaPredicted RBP9.73□□□□□ -0.85
TSC2-220ENST00000568238 C21orf62Q9NYP8 219 aa9.73□□□□□ -0.85
TSC2-220ENST00000568238 LSM5Q9Y4Y9 91 aaKnown RBP9.73□□□□□ -0.85
TSC2-220ENST00000568238 U3KQ87 197 aa9.73□□□□□ -0.85
TSC2-220ENST00000568238 OR2T8A6NH00 312 aa9.72□□□□□ -0.85
TSC2-220ENST00000568238 CORTO00230 105 aa9.72□□□□□ -0.85
TSC2-220ENST00000568238 IFNA4P05014 189 aa9.72□□□□□ -0.85
TSC2-220ENST00000568238 EDN2P20800 178 aa9.72□□□□□ -0.85
TSC2-220ENST00000568238 DEFB114Q30KQ6 69 aa9.72□□□□□ -0.85
TSC2-220ENST00000568238 Q56UQ5 140 aa9.72□□□□□ -0.85
TSC2-220ENST00000568238 SPANXN5Q5MJ07 72 aa9.72□□□□□ -0.85
TSC2-220ENST00000568238 PVRIGQ6DKI7 326 aa9.72□□□□□ -0.85
TSC2-220ENST00000568238 GPHB5Q86YW7 130 aa9.72□□□□□ -0.85
TSC2-220ENST00000568238 NEURL2Q9BR09 285 aa9.72□□□□□ -0.85
TSC2-220ENST00000568238 TECRQ9NZ01 308 aaKnown RBP9.72□□□□□ -0.85
TSC2-220ENST00000568238 RCL1Q9Y2P8 373 aaKnown RBP9.72□□□□□ -0.85
TSC2-220ENST00000568238 TMEM213A2RRL7 107 aa9.71□□□□□ -0.86
TSC2-220ENST00000568238 C15orf62A8K5M9 175 aa9.71□□□□□ -0.86
TSC2-220ENST00000568238 A8MWP6 167 aa9.71□□□□□ -0.86
TSC2-220ENST00000568238 K7EPK0 472 aa9.71□□□□□ -0.86
TSC2-220ENST00000568238 TMEM50AO95807 157 aa9.71□□□□□ -0.86
TSC2-220ENST00000568238 CLEC3BP05452 202 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms