RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 ZMAT5Q9UDW3 170 aaKnown RBP7.43□□□□□ -1.22
CLK3-220ENST00000567992 TMED3Q9Y3Q3 217 aa7.43□□□□□ -1.22
CLK3-220ENST00000567992 LSM4Q9Y4Z0 139 aaKnown RBP7.43□□□□□ -1.22
CLK3-220ENST00000567992 TRAV6A0A075B6T7 132 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 PIGBOS1A0A0B4J2F0 54 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 IGHV3-35A0A0C4DH35 117 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 IZUMO1RA6ND01 250 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 CEBPZOSA8MTT3 80 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 MPTX1A8MV57 137 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 ADAP1O75689 374 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 TCRBP04435 133 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 HOXB5P09067 269 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 FOLR2P14207 255 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 GP9P14770 177 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 HTR2BP41595 481 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 TATDN3Q17R31 274 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 C2orf83Q53S99 150 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 Q56UQ5 140 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 GGNBP1Q5YKI7 109 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 SPSB3Q6PJ21 355 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 PLET1Q6UQ28 207 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 UBAC2Q8NBM4 344 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 SLC24A4Q8NFF2 622 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 PINX1Q96BK5 328 aaKnown RBP7.42□□□□□ -1.22
CLK3-220ENST00000567992 MARVELD1Q9BSK0 173 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 HEYLQ9NQ87 328 aaPredicted RBP7.42□□□□□ -1.22
CLK3-220ENST00000567992 NUDT15Q9NV35 164 aa7.42□□□□□ -1.22
CLK3-220ENST00000567992 FAM90A26D6RGX4 464 aa7.41□□□□□ -1.22
CLK3-220ENST00000567992 CORTO00230 105 aa7.41□□□□□ -1.22
CLK3-220ENST00000567992 RGS13O14921 159 aa7.41□□□□□ -1.22
CLK3-220ENST00000567992 C8orf88P0DMB2 117 aa7.41□□□□□ -1.22
CLK3-220ENST00000567992 SUB1P53999 127 aaKnown RBP eCLIP7.41□□□□□ -1.22
CLK3-220ENST00000567992 MFAP4P55083 255 aa7.41□□□□□ -1.22
CLK3-220ENST00000567992 MLANAQ16655 118 aa7.41□□□□□ -1.22
CLK3-220ENST00000567992 FAM106AQ4KMX7 169 aa7.41□□□□□ -1.22
CLK3-220ENST00000567992 C4orf46Q504U0 113 aa7.41□□□□□ -1.22
CLK3-220ENST00000567992 TM4SF20Q53R12 229 aa7.41□□□□□ -1.22
CLK3-220ENST00000567992 OR1S1Q8NH92 325 aa7.41□□□□□ -1.22
CLK3-220ENST00000567992 DTD1Q8TEA8 209 aa7.41□□□□□ -1.22
CLK3-220ENST00000567992 MITD1Q8WV92 249 aa7.41□□□□□ -1.22
CLK3-220ENST00000567992 TXN2Q99757 166 aa7.41□□□□□ -1.22
CLK3-220ENST00000567992 CACFD1Q9UGQ2 172 aa7.41□□□□□ -1.22
CLK3-220ENST00000567992 IGHV3OR16-8A0A075B7F1 116 aa7.4□□□□□ -1.22
CLK3-220ENST00000567992 FAM240BA0A1B0GVZ2 78 aa7.4□□□□□ -1.22
CLK3-220ENST00000567992 ZNF320A2RRD8 509 aa7.4□□□□□ -1.22
CLK3-220ENST00000567992 NDUFA4O00483 81 aa7.4□□□□□ -1.22
CLK3-220ENST00000567992 CBLN1P23435 193 aa7.4□□□□□ -1.22
CLK3-220ENST00000567992 NPY1RP25929 384 aa7.4□□□□□ -1.22
CLK3-220ENST00000567992 OPRK1P41145 380 aa7.4□□□□□ -1.22
CLK3-220ENST00000567992 ELLP55199 621 aaPredicted RBP7.4□□□□□ -1.22
CLK3-220ENST00000567992 NDUFA5Q16718 116 aa7.4□□□□□ -1.22
CLK3-220ENST00000567992 DEFB114Q30KQ6 69 aa7.4□□□□□ -1.22
CLK3-220ENST00000567992 CD300EQ496F6 205 aaPredicted RBP7.4□□□□□ -1.22
CLK3-220ENST00000567992 ZFP69Q49AA0 526 aa7.4□□□□□ -1.22
CLK3-220ENST00000567992 PRSS54Q6PEW0 395 aa7.4□□□□□ -1.22
CLK3-220ENST00000567992 TCTE3Q8IZS6 198 aa7.4□□□□□ -1.22
CLK3-220ENST00000567992 COQ8AQ8NI60 647 aa7.4□□□□□ -1.22
CLK3-220ENST00000567992 RNASEH2CQ8TDP1 164 aaKnown RBP7.4□□□□□ -1.22
CLK3-220ENST00000567992 SEC22CQ9BRL7 303 aa7.4□□□□□ -1.22
CLK3-220ENST00000567992 GAR1Q9NY12 217 aaKnown RBP7.4□□□□□ -1.22
CLK3-220ENST00000567992 MLXQ9UH92 298 aa7.4□□□□□ -1.22
CLK3-220ENST00000567992 SELENOKQ9Y6D0 94 aa7.4□□□□□ -1.22
CLK3-220ENST00000567992 DNAH7Q8WXX0 4024 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 GNG7O60262 68 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 CLN5O75503 358 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 LY86O95711 162 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 TMEM50AO95807 157 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 H2AFB2P0C5Z0 115 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 NPBWR1P48145 328 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 IFITM2Q01629 132 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 Q8N1Y9 231 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 UXS1Q8NBZ7 420 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 OR4D5Q8NGN0 318 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 OR2K2Q8NGT1 345 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 OR4X1Q8NH49 305 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 OR10C1Q96KK4 312 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 MAGT1Q9H0U3 335 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 HIPK2Q9H2X6 1198 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 ZFAND3Q9H8U3 227 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 DAZ1Q9NQZ3 744 aaKnown RBP7.39□□□□□ -1.23
CLK3-220ENST00000567992 UFC1Q9Y3C8 167 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 U3KQ87 197 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 TENM3Q9P273 2699 aa7.39□□□□□ -1.23
CLK3-220ENST00000567992 C15orf62A8K5M9 175 aa7.38□□□□□ -1.23
CLK3-220ENST00000567992 ZNF785A8K8V0 405 aa7.38□□□□□ -1.23
CLK3-220ENST00000567992 NUPL2O15504 423 aaKnown RBP7.38□□□□□ -1.23
CLK3-220ENST00000567992 SYNGR2O43760 224 aa7.38□□□□□ -1.23
CLK3-220ENST00000567992 IFNA10P01566 189 aa7.38□□□□□ -1.23
CLK3-220ENST00000567992 IGKV1-17P01599 117 aa7.38□□□□□ -1.23
CLK3-220ENST00000567992 IAPPP10997 89 aa7.38□□□□□ -1.23
CLK3-220ENST00000567992 ID3Q02535 119 aa7.38□□□□□ -1.23
CLK3-220ENST00000567992 RELQ04864 619 aaPredicted RBP7.38□□□□□ -1.23
CLK3-220ENST00000567992 CD69Q07108 199 aa7.38□□□□□ -1.23
CLK3-220ENST00000567992 LCN12Q6JVE5 192 aa7.38□□□□□ -1.23
CLK3-220ENST00000567992 BTNL8Q6UX41 500 aa7.38□□□□□ -1.23
CLK3-220ENST00000567992 TOMM20LQ6UXN7 152 aa7.38□□□□□ -1.23
CLK3-220ENST00000567992 TMEM61Q8N0U2 210 aa7.38□□□□□ -1.23
CLK3-220ENST00000567992 TMEM116Q8NCL8 245 aa7.38□□□□□ -1.23
CLK3-220ENST00000567992 DYNLRB2Q8TF09 96 aa7.38□□□□□ -1.23
CLK3-220ENST00000567992 ZNF431Q8TF32 576 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms