RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 IGHV3-72A0A0B4J1Y9 119 aa13.37□□□□□ -0.27
RAB40C-210ENST00000566290 SMCO3A2RU48 225 aa13.37□□□□□ -0.27
RAB40C-210ENST00000566290 TEX22C9J3V5 150 aa13.37□□□□□ -0.27
RAB40C-210ENST00000566290 E7EUB6 86 aa13.37□□□□□ -0.27
RAB40C-210ENST00000566290 PAX6P26367 422 aa13.37□□□□□ -0.27
RAB40C-210ENST00000566290 DLX1P56177 255 aa13.37□□□□□ -0.27
RAB40C-210ENST00000566290 LGALS4P56470 323 aa13.37□□□□□ -0.27
RAB40C-210ENST00000566290 LCN2P80188 198 aa13.37□□□□□ -0.27
RAB40C-210ENST00000566290 GUCA2BQ16661 112 aa13.37□□□□□ -0.27
RAB40C-210ENST00000566290 OR10W1Q8NGF6 305 aa13.37□□□□□ -0.27
RAB40C-210ENST00000566290 RAB24Q969Q5 203 aa13.37□□□□□ -0.27
RAB40C-210ENST00000566290 EAF1Q96JC9 268 aaPredicted RBP13.37□□□□□ -0.27
RAB40C-210ENST00000566290 TMEM250H0YL14 139 aa13.36□□□□□ -0.27
RAB40C-210ENST00000566290 STAG3L2P0CL84 134 aa13.36□□□□□ -0.27
RAB40C-210ENST00000566290 STAG3L3P0CL85 134 aa13.36□□□□□ -0.27
RAB40C-210ENST00000566290 OR13C7P0DN81 318 aa13.36□□□□□ -0.27
RAB40C-210ENST00000566290 B2MP61769 119 aa13.36□□□□□ -0.27
RAB40C-210ENST00000566290 SELENOTP62341 195 aa13.36□□□□□ -0.27
RAB40C-210ENST00000566290 SSBP2P81877 361 aaPredicted RBP13.36□□□□□ -0.27
RAB40C-210ENST00000566290 KLRD1Q13241 179 aa13.36□□□□□ -0.27
RAB40C-210ENST00000566290 GAMTQ14353 236 aa13.36□□□□□ -0.27
RAB40C-210ENST00000566290 SRSF12Q8WXF0 261 aaKnown RBP13.36□□□□□ -0.27
RAB40C-210ENST00000566290 RNF2Q99496 336 aa13.36□□□□□ -0.27
RAB40C-210ENST00000566290 F11RQ9Y624 299 aaKnown RBP13.36□□□□□ -0.27
RAB40C-210ENST00000566290 RHOBP62745 196 aa13.35□□□□□ -0.27
RAB40C-210ENST00000566290 RHEBQ15382 184 aa13.35□□□□□ -0.27
RAB40C-210ENST00000566290 MMDQ15546 238 aa13.35□□□□□ -0.27
RAB40C-210ENST00000566290 SSX2Q16385 188 aa13.35□□□□□ -0.27
RAB40C-210ENST00000566290 TNXAQ16473 311 aa13.35□□□□□ -0.27
RAB40C-210ENST00000566290 C5orf64Q2M2E5 130 aa13.35□□□□□ -0.27
RAB40C-210ENST00000566290 SOHLH1Q5JUK2 328 aa13.35□□□□□ -0.27
RAB40C-210ENST00000566290 C10orf55Q5SWW7 151 aa13.35□□□□□ -0.27
RAB40C-210ENST00000566290 LCN15Q6UWW0 184 aa13.35□□□□□ -0.27
RAB40C-210ENST00000566290 LHFPL4Q7Z7J7 247 aa13.35□□□□□ -0.27
RAB40C-210ENST00000566290 STPG3Q8N7X2 389 aa13.35□□□□□ -0.27
RAB40C-210ENST00000566290 CLRN3Q8NCR9 226 aa13.35□□□□□ -0.27
RAB40C-210ENST00000566290 MGAM2Q2M2H8 2515 aa13.35□□□□□ -0.27
RAB40C-210ENST00000566290 TGFAP01135 160 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 OPN1MWP04001 364 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 FBP1P09467 338 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 LINC00869P0C866 280 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 OPN1MW2P0DN77 364 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 OPN1MW3P0DN78 364 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 GATA3P23771 443 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 CNTFRP26992 372 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 BRS3P32247 399 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 KLK9Q2XQG4 91 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 FAM122CQ6P4D5 195 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 ATRAIDQ6UW56 229 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 IL17RELQ6ZVW7 336 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 SLC35E3Q7Z769 313 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 TMEM116Q8NCL8 245 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 NANPQ8TBE9 248 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 AJUBAQ96IF1 538 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 MRPL32Q9BYC8 188 aaKnown RBP13.34□□□□□ -0.27
RAB40C-210ENST00000566290 FBXL15Q9H469 300 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 SLC25A22Q9H936 323 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 C1RLQ9NZP8 487 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 CDC42EP3Q9UKI2 254 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 KLK9Q9UKQ9 250 aa13.34□□□□□ -0.27
RAB40C-210ENST00000566290 TNCP24821 2201 aa13.33□□□□□ -0.27
RAB40C-210ENST00000566290 IGKV1OR2-108A0A075B7D4 117 aa13.33□□□□□ -0.28
RAB40C-210ENST00000566290 A0A1W2PPV4 95 aa13.33□□□□□ -0.28
RAB40C-210ENST00000566290 DNASE2O00115 360 aaPredicted RBP13.33□□□□□ -0.28
RAB40C-210ENST00000566290 SCO1O75880 301 aa13.33□□□□□ -0.28
RAB40C-210ENST00000566290 CXorf1O96002 111 aa13.33□□□□□ -0.28
RAB40C-210ENST00000566290 MT-CO2P00403 227 aa13.33□□□□□ -0.28
RAB40C-210ENST00000566290 MEF2BQ02080 365 aaPredicted RBP13.33□□□□□ -0.28
RAB40C-210ENST00000566290 HNF4GQ14541 408 aa13.33□□□□□ -0.28
RAB40C-210ENST00000566290 MIC13Q5XKP0 118 aa13.33□□□□□ -0.28
RAB40C-210ENST00000566290 C22orf15Q8WYQ4 148 aa13.33□□□□□ -0.28
RAB40C-210ENST00000566290 RARRES2Q99969 163 aa13.33□□□□□ -0.28
RAB40C-210ENST00000566290 FNDC4Q9H6D8 234 aaPredicted RBP13.33□□□□□ -0.28
RAB40C-210ENST00000566290 GNG13Q9P2W3 67 aa13.33□□□□□ -0.28
RAB40C-210ENST00000566290 OR5G3P0C626 314 aa13.32□□□□□ -0.28
RAB40C-210ENST00000566290 PNRC1Q12796 327 aaPredicted RBP13.32□□□□□ -0.28
RAB40C-210ENST00000566290 HAGHQ16775 308 aa13.32□□□□□ -0.28
RAB40C-210ENST00000566290 FAM74A3Q4VXF1 159 aa13.32□□□□□ -0.28
RAB40C-210ENST00000566290 ZNF562Q6V9R5 426 aa13.32□□□□□ -0.28
RAB40C-210ENST00000566290 GATAD1Q8WUU5 269 aa13.32□□□□□ -0.28
RAB40C-210ENST00000566290 TUBA4BQ9H853 241 aa13.32□□□□□ -0.28
RAB40C-210ENST00000566290 HILPDAQ9Y5L2 63 aa13.32□□□□□ -0.28
RAB40C-210ENST00000566290 TCRBV4S1A1TA0A5B7 111 aa13.31□□□□□ -0.28
RAB40C-210ENST00000566290 NPIPB5A8MRT5 1133 aa13.31□□□□□ -0.28
RAB40C-210ENST00000566290 NPFFO15130 113 aa13.31□□□□□ -0.28
RAB40C-210ENST00000566290 HLA-DRB1P01911 266 aa13.31□□□□□ -0.28
RAB40C-210ENST00000566290 FAM106CPP0CH98 169 aa13.31□□□□□ -0.28
RAB40C-210ENST00000566290 CTRB1P17538 263 aa13.31□□□□□ -0.28
RAB40C-210ENST00000566290 FAM90A2PQ658T7 463 aa13.31□□□□□ -0.28
RAB40C-210ENST00000566290 CTRB2Q6GPI1 263 aa13.31□□□□□ -0.28
RAB40C-210ENST00000566290 CYP2G1PQ6ZSU1 146 aa13.31□□□□□ -0.28
RAB40C-210ENST00000566290 LINC01356Q8N9X3 169 aa13.31□□□□□ -0.28
RAB40C-210ENST00000566290 RXFP4Q8TDU9 374 aa13.31□□□□□ -0.28
RAB40C-210ENST00000566290 ZNF48Q96MX3 618 aaPredicted RBP13.31□□□□□ -0.28
RAB40C-210ENST00000566290 PFDN5Q99471 154 aa13.31□□□□□ -0.28
RAB40C-210ENST00000566290 TRGV9Q99603 122 aa13.31□□□□□ -0.28
RAB40C-210ENST00000566290 PSMB11A5LHX3 300 aa13.3□□□□□ -0.28
RAB40C-210ENST00000566290 B4DEV8 164 aa13.3□□□□□ -0.28
RAB40C-210ENST00000566290 OR10J1P30954 320 aa13.3□□□□□ -0.28
RAB40C-210ENST00000566290 SAA4P35542 130 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms