RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 LINC00299Q6ZSB3 139 aa7.53□□□□□ -1.2
CDH1-206ENST00000564676 S100ZQ8WXG8 99 aa7.53□□□□□ -1.2
CDH1-206ENST00000564676 CACNG8Q8WXS5 425 aa7.53□□□□□ -1.2
CDH1-206ENST00000564676 TMEM190Q8WZ59 177 aa7.53□□□□□ -1.2
CDH1-206ENST00000564676 MARC2Q969Z3 335 aa7.53□□□□□ -1.2
CDH1-206ENST00000564676 B9D2Q9BPU9 175 aa7.53□□□□□ -1.2
CDH1-206ENST00000564676 CCDC32Q9BV29 185 aa7.53□□□□□ -1.2
CDH1-206ENST00000564676 SELENOKQ9Y6D0 94 aa7.53□□□□□ -1.2
CDH1-206ENST00000564676 DNAH9Q9NYC9 4486 aa7.52□□□□□ -1.2
CDH1-206ENST00000564676 IGHV3OR16-8A0A075B7F1 116 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 RPS10-NUDT3A0A1W2PQS6 291 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 A8MWP6 167 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 PLA2G10O15496 165 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 LYRM1O43325 122 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 YIF1AO95070 293 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 CTSGP08311 255 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 HOXB5P09067 269 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 BTCP35070 178 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 TNFRSF9Q07011 255 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 PVRIGQ6DKI7 326 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 GTSCR1Q86UQ5 136 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 NOXA1Q86UR1 476 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 LRTM2Q8N967 370 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 SLC24A4Q8NFF2 622 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 COQ8AQ8NI60 647 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 ASCL2Q99929 193 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 RBKSQ9H477 322 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 MRPL27Q9P0M9 148 aaKnown RBP7.52□□□□□ -1.21
CDH1-206ENST00000564676 TMED3Q9Y3Q3 217 aa7.52□□□□□ -1.21
CDH1-206ENST00000564676 C9orf170A2RU37 121 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 ZNF207O43670 478 aaKnown RBP7.51□□□□□ -1.21
CDH1-206ENST00000564676 SCGB2A1O75556 95 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 IFNA10P01566 189 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 OR4E1P0C645 316 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 ANXA7P20073 488 aaKnown RBP7.51□□□□□ -1.21
CDH1-206ENST00000564676 NPY1RP25929 384 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 MLANAQ16655 118 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 BSXQ3C1V8 233 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 C4orf46Q504U0 113 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 C2orf83Q53S99 150 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 BTNL8Q6UX41 500 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 Q8N1Y9 231 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 DTD1Q8TEA8 209 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 FNDC4Q9H6D8 234 aaPredicted RBP7.51□□□□□ -1.21
CDH1-206ENST00000564676 DAZ1Q9NQZ3 744 aaKnown RBP7.51□□□□□ -1.21
CDH1-206ENST00000564676 BATF3Q9NR55 127 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 PTTG2Q9NZH5 202 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 HSPB7Q9UBY9 170 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 MLXQ9UH92 298 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 U3KQ87 197 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 TGP01266 2768 aa7.51□□□□□ -1.21
CDH1-206ENST00000564676 C15orf62A8K5M9 175 aa7.5□□□□□ -1.21
CDH1-206ENST00000564676 ZNF785A8K8V0 405 aa7.5□□□□□ -1.21
CDH1-206ENST00000564676 K7EMT4 169 aa7.5□□□□□ -1.21
CDH1-206ENST00000564676 PITX3O75364 302 aa7.5□□□□□ -1.21
CDH1-206ENST00000564676 CLN5O75503 358 aa7.5□□□□□ -1.21
CDH1-206ENST00000564676 MED6O75586 246 aa7.5□□□□□ -1.21
CDH1-206ENST00000564676 TMEM50AO95807 157 aa7.5□□□□□ -1.21
CDH1-206ENST00000564676 C8orf88P0DMB2 117 aa7.5□□□□□ -1.21
CDH1-206ENST00000564676 SLC25A6P12236 298 aa7.5□□□□□ -1.21
CDH1-206ENST00000564676 DHRS2Q13268 280 aa7.5□□□□□ -1.21
CDH1-206ENST00000564676 ZNF846Q147U1 533 aa7.5□□□□□ -1.21
CDH1-206ENST00000564676 GGNBP1Q5YKI7 109 aa7.5□□□□□ -1.21
CDH1-206ENST00000564676 C11orf87Q6NUJ2 197 aa7.5□□□□□ -1.21
CDH1-206ENST00000564676 ZNF600Q6ZNG1 722 aa7.5□□□□□ -1.21
CDH1-206ENST00000564676 RBPMS2Q6ZRY4 209 aaKnown RBP7.5□□□□□ -1.21
CDH1-206ENST00000564676 LYG2Q86SG7 212 aa7.5□□□□□ -1.21
CDH1-206ENST00000564676 OR4X1Q8NH49 305 aa7.5□□□□□ -1.21
CDH1-206ENST00000564676 RNASEH2CQ8TDP1 164 aaKnown RBP7.5□□□□□ -1.21
CDH1-206ENST00000564676 WDR89Q96FK6 387 aaPredicted RBP7.5□□□□□ -1.21
CDH1-206ENST00000564676 WDR12Q9GZL7 423 aaKnown RBP7.5□□□□□ -1.21
CDH1-206ENST00000564676 TUBA4BQ9H853 241 aa7.5□□□□□ -1.21
CDH1-206ENST00000564676 TRAV6A0A075B6T7 132 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 FAM240BA0A1B0GVZ2 78 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 FAM90A26D6RGX4 464 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 SCAF4O95104 1147 aaKnown RBP7.49□□□□□ -1.21
CDH1-206ENST00000564676 IFNA21P01568 189 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 TCRBP04435 133 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 IFNA4P05014 189 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 FRMD6-AS1P0C7T7 363 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 NHLRC4P0CG21 123 aaPredicted RBP7.49□□□□□ -1.21
CDH1-206ENST00000564676 IGHV4-30-4P0DP06 118 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 IAPPP10997 89 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 SLC25A4P12235 298 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 CD81P60033 236 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 LAMTOR1Q6IAA8 161 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 ETFRF1Q6IPR1 90 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 MZT2BQ6NZ67 158 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 TMEM61Q8N0U2 210 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 NEURL2Q9BR09 285 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 GINS3Q9BRX5 216 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 C20orf85Q9H1P6 137 aa7.49□□□□□ -1.21
CDH1-206ENST00000564676 MRPL36Q9P0J6 103 aaKnown RBP7.49□□□□□ -1.21
CDH1-206ENST00000564676 PAIP2BQ9ULR5 123 aaKnown RBP7.49□□□□□ -1.21
CDH1-206ENST00000564676 TRAV30A0A087WSZ9 112 aa7.48□□□□□ -1.21
CDH1-206ENST00000564676 IGHV3-49A0A0A0MS15 119 aa7.48□□□□□ -1.21
CDH1-206ENST00000564676 TRAV14DV4A0A0A6YYC5 116 aa7.48□□□□□ -1.21
CDH1-206ENST00000564676 TRAV25A0A0B4J276 109 aa7.48□□□□□ -1.21
CDH1-206ENST00000564676 ADAP1O75689 374 aa7.48□□□□□ -1.21
CDH1-206ENST00000564676 CD7P09564 240 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms