RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 OR10J1P30954 320 aa12.33□□□□□ -0.44
COMMD4-210ENST00000564587 RHOBP62745 196 aa12.33□□□□□ -0.44
COMMD4-210ENST00000564587 ZNF726P1Q15940 193 aa12.33□□□□□ -0.44
COMMD4-210ENST00000564587 KHDC3LQ587J8 217 aa12.33□□□□□ -0.44
COMMD4-210ENST00000564587 BRD3OSQ6XYD6 125 aa12.33□□□□□ -0.44
COMMD4-210ENST00000564587 CYP2G1PQ6ZSU1 146 aa12.33□□□□□ -0.44
COMMD4-210ENST00000564587 CCDC28AQ8IWP9 274 aa12.33□□□□□ -0.44
COMMD4-210ENST00000564587 NANPQ8TBE9 248 aa12.33□□□□□ -0.44
COMMD4-210ENST00000564587 RAB24Q969Q5 203 aa12.33□□□□□ -0.44
COMMD4-210ENST00000564587 SSX3Q99909 188 aa12.33□□□□□ -0.44
COMMD4-210ENST00000564587 SLC25A33Q9BSK2 321 aa12.33□□□□□ -0.44
COMMD4-210ENST00000564587 SEC11CQ9BY50 192 aa12.33□□□□□ -0.44
COMMD4-210ENST00000564587 CENPEQ02224 2701 aa12.33□□□□□ -0.44
COMMD4-210ENST00000564587 IGHV7-81A0A0B4J1V7 117 aa12.32□□□□□ -0.44
COMMD4-210ENST00000564587 TCRBV4S1A1TA0A5B7 111 aa12.32□□□□□ -0.44
COMMD4-210ENST00000564587 YIF1AO95070 293 aa12.32□□□□□ -0.44
COMMD4-210ENST00000564587 FABP1P07148 127 aa12.32□□□□□ -0.44
COMMD4-210ENST00000564587 HIST1H1BP16401 226 aaKnown RBP12.32□□□□□ -0.44
COMMD4-210ENST00000564587 PSMB3P49720 205 aa12.32□□□□□ -0.44
COMMD4-210ENST00000564587 MFAP2P55001 183 aa12.32□□□□□ -0.44
COMMD4-210ENST00000564587 KLF17Q5JT82 389 aaPredicted RBP12.32□□□□□ -0.44
COMMD4-210ENST00000564587 ZNF506Q5JVG8 444 aa12.32□□□□□ -0.44
COMMD4-210ENST00000564587 OR2T6Q8NHC8 308 aa12.32□□□□□ -0.44
COMMD4-210ENST00000564587 SGMS2Q8NHU3 365 aa12.32□□□□□ -0.44
COMMD4-210ENST00000564587 NPIPB3Q92617 1050 aa12.32□□□□□ -0.44
COMMD4-210ENST00000564587 TRGV9Q99603 122 aa12.32□□□□□ -0.44
COMMD4-210ENST00000564587 SCRT1Q9BWW7 348 aa12.32□□□□□ -0.44
COMMD4-210ENST00000564587 SLC25A22Q9H936 323 aa12.32□□□□□ -0.44
COMMD4-210ENST00000564587 CELSR2Q9HCU4 2923 aa12.31□□□□□ -0.44
COMMD4-210ENST00000564587 ZFP92A6NM28 416 aa12.31□□□□□ -0.44
COMMD4-210ENST00000564587 F8W036 122 aa12.31□□□□□ -0.44
COMMD4-210ENST00000564587 HSPB1P04792 205 aaKnown RBP12.31□□□□□ -0.44
COMMD4-210ENST00000564587 LINC00869P0C866 280 aa12.31□□□□□ -0.44
COMMD4-210ENST00000564587 RND2P52198 227 aa12.31□□□□□ -0.44
COMMD4-210ENST00000564587 CCL20P78556 96 aa12.31□□□□□ -0.44
COMMD4-210ENST00000564587 MLANAQ16655 118 aa12.31□□□□□ -0.44
COMMD4-210ENST00000564587 FBLN7Q53RD9 439 aa12.31□□□□□ -0.44
COMMD4-210ENST00000564587 C10orf91Q5T1B1 145 aa12.31□□□□□ -0.44
COMMD4-210ENST00000564587 KRTAP1-3Q8IUG1 177 aa12.31□□□□□ -0.44
COMMD4-210ENST00000564587 C5orf56Q8N8D9 126 aa12.31□□□□□ -0.44
COMMD4-210ENST00000564587 OR1L4Q8NGR5 311 aa12.31□□□□□ -0.44
COMMD4-210ENST00000564587 OR4X1Q8NH49 305 aa12.31□□□□□ -0.44
COMMD4-210ENST00000564587 PFDN5Q99471 154 aa12.31□□□□□ -0.44
COMMD4-210ENST00000564587 SLC35B3Q9H1N7 401 aa12.31□□□□□ -0.44
COMMD4-210ENST00000564587 MANBALQ9NQG1 85 aa12.31□□□□□ -0.44
COMMD4-210ENST00000564587 CARHSP1Q9Y2V2 147 aaKnown RBP12.31□□□□□ -0.44
COMMD4-210ENST00000564587 IGKV1OR2-108A0A075B7D4 117 aa12.3□□□□□ -0.44
COMMD4-210ENST00000564587 A0A1B0GV50 99 aa12.3□□□□□ -0.44
COMMD4-210ENST00000564587 I3L2K1 104 aa12.3□□□□□ -0.44
COMMD4-210ENST00000564587 SCGB2A1O75556 95 aa12.3□□□□□ -0.44
COMMD4-210ENST00000564587 AVPP01185 164 aa12.3□□□□□ -0.44
COMMD4-210ENST00000564587 APELAP0DMC3 54 aa12.3□□□□□ -0.44
COMMD4-210ENST00000564587 SRSF3P84103 164 aaKnown RBP12.3□□□□□ -0.44
COMMD4-210ENST00000564587 KLK9Q2XQG4 91 aa12.3□□□□□ -0.44
COMMD4-210ENST00000564587 SLC35E3Q7Z769 313 aa12.3□□□□□ -0.44
COMMD4-210ENST00000564587 PIFOQ8TCI5 191 aa12.3□□□□□ -0.44
COMMD4-210ENST00000564587 GATAD1Q8WUU5 269 aa12.3□□□□□ -0.44
COMMD4-210ENST00000564587 FOXC2Q99958 501 aa12.3□□□□□ -0.44
COMMD4-210ENST00000564587 MRPL32Q9BYC8 188 aaKnown RBP12.3□□□□□ -0.44
COMMD4-210ENST00000564587 TMEM231Q9H6L2 316 aa12.3□□□□□ -0.44
COMMD4-210ENST00000564587 KLK9Q9UKQ9 250 aa12.3□□□□□ -0.44
COMMD4-210ENST00000564587 ITPR3Q14573 2671 aa12.3□□□□□ -0.44
COMMD4-210ENST00000564587 CRYBG3Q68DQ2 2970 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 IGLV11-55A0A075B6I3 123 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 TRAV30A0A087WSZ9 112 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 LOC102723971A0A1B0GUV8 181 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 A6NDX4 124 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 CXorf1O96002 111 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 APOC3P02656 99 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 SFTA3P0C7M3 94 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 STAG3L2P0CL84 134 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 STAG3L3P0CL85 134 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 BCL2P10415 239 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 TAS2R45P59539 299 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 AKIRIN2Q53H80 203 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 C9orf139Q6ZV77 190 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 SSX7Q7RTT5 188 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 SVBPQ8N300 66 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 FAM110DQ8TAY7 271 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-210ENST00000564587 ZNF48Q96MX3 618 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-210ENST00000564587 TXNDC17Q9BRA2 123 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 FAM103A1Q9BTL3 118 aaKnown RBP12.29□□□□□ -0.44
COMMD4-210ENST00000564587 TNFRSF19Q9NS68 423 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 GNG13Q9P2W3 67 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 VAX2Q9UIW0 290 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 NAV3Q8IVL0 2385 aa12.29□□□□□ -0.44
COMMD4-210ENST00000564587 PRRC2AP48634 2157 aaKnown RBP12.28□□□□□ -0.44
COMMD4-210ENST00000564587 FSHBP01225 129 aa12.28□□□□□ -0.44
COMMD4-210ENST00000564587 NPBWR1P48145 328 aa12.28□□□□□ -0.44
COMMD4-210ENST00000564587 FGF8P55075 233 aaPredicted RBP12.28□□□□□ -0.44
COMMD4-210ENST00000564587 NDPQ00604 133 aa12.28□□□□□ -0.44
COMMD4-210ENST00000564587 HAGHQ16775 308 aa12.28□□□□□ -0.44
COMMD4-210ENST00000564587 ASPHD1Q5U4P2 390 aa12.28□□□□□ -0.44
COMMD4-210ENST00000564587 OR5R1Q8NH85 324 aa12.28□□□□□ -0.44
COMMD4-210ENST00000564587 DNAJC4Q9NNZ3 241 aa12.28□□□□□ -0.44
COMMD4-210ENST00000564587 TECRQ9NZ01 308 aaKnown RBP12.28□□□□□ -0.44
COMMD4-210ENST00000564587 FUT9Q9Y231 359 aa12.28□□□□□ -0.44
COMMD4-210ENST00000564587 CR1P17927 2039 aa12.28□□□□□ -0.44
COMMD4-210ENST00000564587 IGKV1D-37A0A075B6S9 117 aa12.27□□□□□ -0.45
COMMD4-210ENST00000564587 ELOA3CA0A087WX78 387 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms