RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 MT-CO2P00403 227 aa13.21□□□□□ -0.29
CMTM3-208ENST00000564247 C4BPBP20851 252 aa13.21□□□□□ -0.29
CMTM3-208ENST00000564247 RAB9AP51151 201 aa13.21□□□□□ -0.29
CMTM3-208ENST00000564247 RHOGP84095 191 aa13.21□□□□□ -0.29
CMTM3-208ENST00000564247 ATP5G2Q06055 141 aa13.21□□□□□ -0.29
CMTM3-208ENST00000564247 CD69Q07108 199 aa13.21□□□□□ -0.29
CMTM3-208ENST00000564247 FAM223AQ8IWN6 122 aa13.21□□□□□ -0.29
CMTM3-208ENST00000564247 KLHDC1Q8N7A1 406 aa13.21□□□□□ -0.29
CMTM3-208ENST00000564247 OR5AU1Q8NGC0 362 aa13.21□□□□□ -0.29
CMTM3-208ENST00000564247 OR5C1Q8NGR4 320 aa13.21□□□□□ -0.29
CMTM3-208ENST00000564247 USMG5Q96IX5 58 aa13.21□□□□□ -0.29
CMTM3-208ENST00000564247 SLC35E1Q96K37 410 aa13.21□□□□□ -0.29
CMTM3-208ENST00000564247 DMRT1Q9Y5R6 373 aa13.21□□□□□ -0.29
CMTM3-208ENST00000564247 A0A0G2JLM5 398 aa13.2□□□□□ -0.3
CMTM3-208ENST00000564247 RNF222A6NCQ9 220 aa13.2□□□□□ -0.3
CMTM3-208ENST00000564247 NDUFB8O95169 186 aa13.2□□□□□ -0.3
CMTM3-208ENST00000564247 DLK1P80370 383 aa13.2□□□□□ -0.3
CMTM3-208ENST00000564247 ARL16Q0P5N6 197 aa13.2□□□□□ -0.3
CMTM3-208ENST00000564247 ZNF345Q14585 488 aa13.2□□□□□ -0.3
CMTM3-208ENST00000564247 TREML4Q6UXN2 200 aa13.2□□□□□ -0.3
CMTM3-208ENST00000564247 KCNRGQ8N5I3 272 aa13.2□□□□□ -0.3
CMTM3-208ENST00000564247 OR4X2Q8NGF9 303 aa13.2□□□□□ -0.3
CMTM3-208ENST00000564247 VN1R17PQ8TDU5 208 aa13.2□□□□□ -0.3
CMTM3-208ENST00000564247 CXorf58Q96LI9 332 aa13.2□□□□□ -0.3
CMTM3-208ENST00000564247 WNK1Q9H4A3 2382 aa13.19□□□□□ -0.3
CMTM3-208ENST00000564247 SMCO3A2RU48 225 aa13.19□□□□□ -0.3
CMTM3-208ENST00000564247 I3L2K1 104 aa13.19□□□□□ -0.3
CMTM3-208ENST00000564247 M0QZ24 198 aa13.19□□□□□ -0.3
CMTM3-208ENST00000564247 TAAR5O14804 337 aa13.19□□□□□ -0.3
CMTM3-208ENST00000564247 DFFBO76075 338 aa13.19□□□□□ -0.3
CMTM3-208ENST00000564247 CXCL2P19875 107 aa13.19□□□□□ -0.3
CMTM3-208ENST00000564247 PSMB8P28062 276 aa13.19□□□□□ -0.3
CMTM3-208ENST00000564247 MFAP4P55083 255 aa13.19□□□□□ -0.3
CMTM3-208ENST00000564247 MLANAQ16655 118 aa13.19□□□□□ -0.3
CMTM3-208ENST00000564247 LGALSLQ3ZCW2 172 aaPredicted RBP13.19□□□□□ -0.3
CMTM3-208ENST00000564247 ACSM6Q6P461 480 aa13.19□□□□□ -0.3
CMTM3-208ENST00000564247 TMUB2Q71RG4 321 aa13.19□□□□□ -0.3
CMTM3-208ENST00000564247 SLC16A13Q7RTY0 426 aa13.19□□□□□ -0.3
CMTM3-208ENST00000564247 HAPLN4Q86UW8 402 aa13.19□□□□□ -0.3
CMTM3-208ENST00000564247 SMIM3Q9BZL3 60 aa13.19□□□□□ -0.3
CMTM3-208ENST00000564247 KLK15Q9H2R5 256 aa13.19□□□□□ -0.3
CMTM3-208ENST00000564247 IGHV3-21A0A0B4J1V1 117 aa13.18□□□□□ -0.3
CMTM3-208ENST00000564247 KANTRA0A1W2PQU2 76 aa13.18□□□□□ -0.3
CMTM3-208ENST00000564247 PRSS46E5RG02 174 aa13.18□□□□□ -0.3
CMTM3-208ENST00000564247 FNDC10F2Z333 226 aa13.18□□□□□ -0.3
CMTM3-208ENST00000564247 BOLA2-SMG1P6H3BVE0 249 aa13.18□□□□□ -0.3
CMTM3-208ENST00000564247 K7EIM0 57 aa13.18□□□□□ -0.3
CMTM3-208ENST00000564247 IFNA5P01569 189 aa13.18□□□□□ -0.3
CMTM3-208ENST00000564247 CLINT1Q14677 625 aa13.18□□□□□ -0.3
CMTM3-208ENST00000564247 C15orf32Q32M92 178 aa13.18□□□□□ -0.3
CMTM3-208ENST00000564247 SCARB1Q8WTV0 552 aa13.18□□□□□ -0.3
CMTM3-208ENST00000564247 EEF1AKMT3Q96AZ1 226 aa13.18□□□□□ -0.3
CMTM3-208ENST00000564247 BSCL2Q96G97 398 aaPredicted RBP13.18□□□□□ -0.3
CMTM3-208ENST00000564247 TMEM147Q9BVK8 224 aa13.18□□□□□ -0.3
CMTM3-208ENST00000564247 ARL6Q9H0F7 186 aa13.18□□□□□ -0.3
CMTM3-208ENST00000564247 FNDC4Q9H6D8 234 aaPredicted RBP13.18□□□□□ -0.3
CMTM3-208ENST00000564247 NPVFQ9HCQ7 196 aa13.18□□□□□ -0.3
CMTM3-208ENST00000564247 UQCC1Q9NVA1 299 aa13.18□□□□□ -0.3
CMTM3-208ENST00000564247 FBXL17Q9UF56 701 aa13.18□□□□□ -0.3
CMTM3-208ENST00000564247 NPBWR1P48145 328 aa13.17□□□□□ -0.3
CMTM3-208ENST00000564247 NKX2-5P52952 324 aaPredicted RBP13.17□□□□□ -0.3
CMTM3-208ENST00000564247 AKR1C1Q04828 323 aa13.17□□□□□ -0.3
CMTM3-208ENST00000564247 C10orf99Q6UWK7 81 aa13.17□□□□□ -0.3
CMTM3-208ENST00000564247 RNF152Q8N8N0 203 aa13.17□□□□□ -0.3
CMTM3-208ENST00000564247 ACY3Q96HD9 319 aa13.17□□□□□ -0.3
CMTM3-208ENST00000564247 TXN2Q99757 166 aa13.17□□□□□ -0.3
CMTM3-208ENST00000564247 ATP5SQ99766 215 aa13.17□□□□□ -0.3
CMTM3-208ENST00000564247 ARPC5LQ9BPX5 153 aa13.17□□□□□ -0.3
CMTM3-208ENST00000564247 GAR1Q9NY12 217 aaKnown RBP13.17□□□□□ -0.3
CMTM3-208ENST00000564247 C21orf62Q9NYP8 219 aa13.17□□□□□ -0.3
CMTM3-208ENST00000564247 TRBV7-1A0A0A6YYK4 115 aa13.16□□□□□ -0.3
CMTM3-208ENST00000564247 BORCS7-ASMTA0A0B4J1R7 106 aa13.16□□□□□ -0.3
CMTM3-208ENST00000564247 SCGB2A1O75556 95 aa13.16□□□□□ -0.3
CMTM3-208ENST00000564247 IGHV3-48P01763 117 aa13.16□□□□□ -0.3
CMTM3-208ENST00000564247 GAMTQ14353 236 aa13.16□□□□□ -0.3
CMTM3-208ENST00000564247 ZNF266Q14584 549 aa13.16□□□□□ -0.3
CMTM3-208ENST00000564247 FAM209BQ5JX69 171 aa13.16□□□□□ -0.3
CMTM3-208ENST00000564247 C9orf62Q8N4C0 152 aa13.16□□□□□ -0.3
CMTM3-208ENST00000564247 SCGB1C1Q8TD33 95 aa13.16□□□□□ -0.3
CMTM3-208ENST00000564247 BCL2L11O43521 198 aa13.15□□□□□ -0.3
CMTM3-208ENST00000564247 RPLP1P05386 114 aaKnown RBP13.15□□□□□ -0.3
CMTM3-208ENST00000564247 DEFA5Q01523 94 aa13.15□□□□□ -0.3
CMTM3-208ENST00000564247 RAB31Q13636 194 aa13.15□□□□□ -0.3
CMTM3-208ENST00000564247 Q56UQ5 140 aa13.15□□□□□ -0.3
CMTM3-208ENST00000564247 LCNL1Q6ZST4 164 aa13.15□□□□□ -0.3
CMTM3-208ENST00000564247 TMEM144Q7Z5S9 345 aa13.15□□□□□ -0.3
CMTM3-208ENST00000564247 ZNF491Q8N8L2 437 aa13.15□□□□□ -0.3
CMTM3-208ENST00000564247 UBAC2Q8NBM4 344 aa13.15□□□□□ -0.3
CMTM3-208ENST00000564247 TMEM116Q8NCL8 245 aa13.15□□□□□ -0.3
CMTM3-208ENST00000564247 OR4X1Q8NH49 305 aa13.15□□□□□ -0.3
CMTM3-208ENST00000564247 NPIPB3Q92617 1050 aa13.15□□□□□ -0.3
CMTM3-208ENST00000564247 MEGF8Q7Z7M0 2845 aa13.14□□□□□ -0.31
CMTM3-208ENST00000564247 TRAV30A0A087WSZ9 112 aa13.14□□□□□ -0.31
CMTM3-208ENST00000564247 TCRBV4S1A1TA0A5B7 111 aa13.14□□□□□ -0.31
CMTM3-208ENST00000564247 MFSD2BA6NFX1 497 aa13.14□□□□□ -0.31
CMTM3-208ENST00000564247 GNG7O60262 68 aa13.14□□□□□ -0.31
CMTM3-208ENST00000564247 JTBO76095 146 aa13.14□□□□□ -0.31
CMTM3-208ENST00000564247 FCGR2BP31994 310 aaPredicted RBP13.14□□□□□ -0.31
CMTM3-208ENST00000564247 RND2P52198 227 aa13.14□□□□□ -0.31
CMTM3-208ENST00000564247 EIF5AP63241 154 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms