RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 SHPKQ9UHJ6 478 aa23.05■■□□□ 1.28
CMTM4-204ENST00000563952 FNDC4Q9H6D8 234 aaPredicted RBP23.04■■□□□ 1.28
CMTM4-204ENST00000563952 VAMP1P23763 118 aa23.03■■□□□ 1.28
CMTM4-204ENST00000563952 MLANAQ16655 118 aa23.03■■□□□ 1.28
CMTM4-204ENST00000563952 TMEM128Q5BJH2 165 aa23.03■■□□□ 1.28
CMTM4-204ENST00000563952 NMSQ5H8A3 153 aa23.03■■□□□ 1.28
CMTM4-204ENST00000563952 TRIQKQ629K1 86 aa23.03■■□□□ 1.28
CMTM4-204ENST00000563952 LAMTOR1Q6IAA8 161 aa23.03■■□□□ 1.28
CMTM4-204ENST00000563952 IGHV3-49A0A0A0MS15 119 aa23.02■■□□□ 1.28
CMTM4-204ENST00000563952 CCR6P51684 374 aa23.02■■□□□ 1.28
CMTM4-204ENST00000563952 SMCO1Q147U7 214 aa23.02■■□□□ 1.28
CMTM4-204ENST00000563952 BAK1Q16611 211 aa23.02■■□□□ 1.28
CMTM4-204ENST00000563952 OR10C1Q96KK4 312 aa23.02■■□□□ 1.28
CMTM4-204ENST00000563952 SPATA25Q9BR10 227 aa23.02■■□□□ 1.28
CMTM4-204ENST00000563952 NDUFA13Q9P0J0 144 aa23.02■■□□□ 1.28
CMTM4-204ENST00000563952 MRPL36Q9P0J6 103 aaKnown RBP23.02■■□□□ 1.28
CMTM4-204ENST00000563952 SMPXQ9UHP9 88 aa23.02■■□□□ 1.28
CMTM4-204ENST00000563952 HUWE1Q7Z6Z7 4374 aaKnown RBP23.02■■□□□ 1.28
CMTM4-204ENST00000563952 IGHV7-4-1A0A0J9YVY3 117 aa23.01■■□□□ 1.27
CMTM4-204ENST00000563952 TMEM50AO95807 157 aa23.01■■□□□ 1.27
CMTM4-204ENST00000563952 TMEM116Q8NCL8 245 aa23.01■■□□□ 1.27
CMTM4-204ENST00000563952 SLC24A4Q8NFF2 622 aa23.01■■□□□ 1.27
CMTM4-204ENST00000563952 SPAG8Q99932 426 aaPredicted RBP23.01■■□□□ 1.27
CMTM4-204ENST00000563952 HIPK2Q9H2X6 1198 aa23.01■■□□□ 1.27
CMTM4-204ENST00000563952 CACFD1Q9UGQ2 172 aa23.01■■□□□ 1.27
CMTM4-204ENST00000563952 RBMY1BA6NDE4 496 aaKnown RBP23■■□□□ 1.27
CMTM4-204ENST00000563952 RBMY1EA6NEQ0 496 aaKnown RBP23■■□□□ 1.27
CMTM4-204ENST00000563952 TSPAN4O14817 238 aa23■■□□□ 1.27
CMTM4-204ENST00000563952 RBMY1DP0C7P1 496 aaKnown RBP23■■□□□ 1.27
CMTM4-204ENST00000563952 TOMM20LQ6UXN7 152 aa23■■□□□ 1.27
CMTM4-204ENST00000563952 LINC00322Q6ZN03 302 aaPredicted RBP23■■□□□ 1.27
CMTM4-204ENST00000563952 RHPN1-AS1Q9BWJ2 59 aa23■■□□□ 1.27
CMTM4-204ENST00000563952 TRAV14DV4A0A0A6YYC5 116 aa22.99■■□□□ 1.27
CMTM4-204ENST00000563952 LINC00854A0A1B0GVQ3 168 aa22.99■■□□□ 1.27
CMTM4-204ENST00000563952 TNFRSF9Q07011 255 aa22.99■■□□□ 1.27
CMTM4-204ENST00000563952 C2orf83Q53S99 150 aa22.99■■□□□ 1.27
CMTM4-204ENST00000563952 ZNF600Q6ZNG1 722 aa22.99■■□□□ 1.27
CMTM4-204ENST00000563952 CENPSQ8N2Z9 138 aa22.99■■□□□ 1.27
CMTM4-204ENST00000563952 GINS3Q9BRX5 216 aa22.99■■□□□ 1.27
CMTM4-204ENST00000563952 PUS1Q9Y606 427 aaKnown RBP eCLIP22.99■■□□□ 1.27
CMTM4-204ENST00000563952 STAB2Q8WWQ8 2551 aa22.98■■□□□ 1.27
CMTM4-204ENST00000563952 IGHV3OR16-13A0A075B7E8 117 aa22.98■■□□□ 1.27
CMTM4-204ENST00000563952 IGHV3-74A0A0B4J1X5 117 aa22.98■■□□□ 1.27
CMTM4-204ENST00000563952 RPS10-NUDT3A0A1W2PQS6 291 aa22.98■■□□□ 1.27
CMTM4-204ENST00000563952 CHEK1O14757 476 aa22.98■■□□□ 1.27
CMTM4-204ENST00000563952 CLN5O75503 358 aa22.98■■□□□ 1.27
CMTM4-204ENST00000563952 RBMS2Q15434 407 aaKnown RBP22.98■■□□□ 1.27
CMTM4-204ENST00000563952 OR4X1Q8NH49 305 aa22.98■■□□□ 1.27
CMTM4-204ENST00000563952 OR1S1Q8NH92 325 aa22.98■■□□□ 1.27
CMTM4-204ENST00000563952 RNF2Q99496 336 aa22.98■■□□□ 1.27
CMTM4-204ENST00000563952 PIGBOS1A0A0B4J2F0 54 aa22.97■■□□□ 1.27
CMTM4-204ENST00000563952 PPP1R1AQ13522 171 aa22.97■■□□□ 1.27
CMTM4-204ENST00000563952 SDHCQ99643 169 aaPredicted RBP22.97■■□□□ 1.27
CMTM4-204ENST00000563952 RBKSQ9H477 322 aa22.97■■□□□ 1.27
CMTM4-204ENST00000563952 HSPB7Q9UBY9 170 aa22.97■■□□□ 1.27
CMTM4-204ENST00000563952 A0A1B0GU03 582 aa22.96■■□□□ 1.27
CMTM4-204ENST00000563952 SCGB2A1O75556 95 aa22.96■■□□□ 1.27
CMTM4-204ENST00000563952 SFT2D2O95562 160 aa22.96■■□□□ 1.27
CMTM4-204ENST00000563952 NPY1RP25929 384 aa22.96■■□□□ 1.27
CMTM4-204ENST00000563952 RNASEH2CQ8TDP1 164 aaKnown RBP22.96■■□□□ 1.27
CMTM4-204ENST00000563952 DTD1Q8TEA8 209 aa22.96■■□□□ 1.27
CMTM4-204ENST00000563952 TMEM170AQ8WVE7 144 aa22.96■■□□□ 1.27
CMTM4-204ENST00000563952 RETNQ9HD89 108 aa22.96■■□□□ 1.27
CMTM4-204ENST00000563952 UBQLN2Q9UHD9 624 aa22.96■■□□□ 1.27
CMTM4-204ENST00000563952 TENM3Q9P273 2699 aa22.95■■□□□ 1.27
CMTM4-204ENST00000563952 DUXBA0A1W2PPF3 345 aa22.95■■□□□ 1.26
CMTM4-204ENST00000563952 NAP1L6A6NFF2 107 aa22.95■■□□□ 1.26
CMTM4-204ENST00000563952 IFNA10P01566 189 aa22.95■■□□□ 1.26
CMTM4-204ENST00000563952 ZFAND3Q9H8U3 227 aa22.95■■□□□ 1.26
CMTM4-204ENST00000563952 OR4C46A6NHA9 309 aa22.93■■□□□ 1.26
CMTM4-204ENST00000563952 RND2P52198 227 aa22.93■■□□□ 1.26
CMTM4-204ENST00000563952 TIGITQ495A1 244 aa22.93■■□□□ 1.26
CMTM4-204ENST00000563952 NOXA1Q86UR1 476 aa22.93■■□□□ 1.26
CMTM4-204ENST00000563952 LRTM2Q8N967 370 aa22.93■■□□□ 1.26
CMTM4-204ENST00000563952 IGKV3-7A0A075B6H7 116 aa22.92■■□□□ 1.26
CMTM4-204ENST00000563952 NDUFB6O95139 128 aa22.92■■□□□ 1.26
CMTM4-204ENST00000563952 SLC25A4P12235 298 aa22.92■■□□□ 1.26
CMTM4-204ENST00000563952 PRSS54Q6PEW0 395 aa22.92■■□□□ 1.26
CMTM4-204ENST00000563952 U3KQ87 197 aa22.92■■□□□ 1.26
CMTM4-204ENST00000563952 TRAV30A0A087WSZ9 112 aa22.91■■□□□ 1.26
CMTM4-204ENST00000563952 IGHV3-66A0A0C4DH42 116 aa22.91■■□□□ 1.26
CMTM4-204ENST00000563952 APOHP02749 345 aaPredicted RBP22.91■■□□□ 1.26
CMTM4-204ENST00000563952 IL7P13232 177 aa22.91■■□□□ 1.26
CMTM4-204ENST00000563952 BMI1P35226 326 aa22.91■■□□□ 1.26
CMTM4-204ENST00000563952 TFPI2P48307 235 aa22.91■■□□□ 1.26
CMTM4-204ENST00000563952 ETFRF1Q6IPR1 90 aa22.91■■□□□ 1.26
CMTM4-204ENST00000563952 ST8SIA2Q92186 375 aa22.91■■□□□ 1.26
CMTM4-204ENST00000563952 CITED4Q96RK1 184 aa22.91■■□□□ 1.26
CMTM4-204ENST00000563952 CENPXA8MT69 81 aa22.9■■□□□ 1.26
CMTM4-204ENST00000563952 IGKV1-17P01599 117 aa22.9■■□□□ 1.26
CMTM4-204ENST00000563952 FAM110AQ9BQ89 295 aa22.9■■□□□ 1.26
CMTM4-204ENST00000563952 GGTLC1Q9BX51 225 aa22.9■■□□□ 1.26
CMTM4-204ENST00000563952 FLVCR2Q9UPI3 526 aa22.9■■□□□ 1.26
CMTM4-204ENST00000563952 PITX3O75364 302 aa22.89■■□□□ 1.25
CMTM4-204ENST00000563952 HOXB5P09067 269 aa22.89■■□□□ 1.25
CMTM4-204ENST00000563952 UBE2MP61081 183 aaKnown RBP22.89■■□□□ 1.25
CMTM4-204ENST00000563952 TCF24Q7RTU0 167 aa22.89■■□□□ 1.25
CMTM4-204ENST00000563952 OR1S2Q8NGQ3 325 aa22.89■■□□□ 1.25
CMTM4-204ENST00000563952 MUC7Q8TAX7 377 aa22.89■■□□□ 1.25
CMTM4-204ENST00000563952 TMED3Q9Y3Q3 217 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 1410.7 ms