RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 TBC1D24Q9ULP9 559 aa13.49□□□□□ -0.25
NME3-204ENST00000563498 PKHD1P08F94 4074 aa13.48□□□□□ -0.25
NME3-204ENST00000563498 P2RY1P47900 373 aa13.48□□□□□ -0.25
NME3-204ENST00000563498 SUB1P53999 127 aaKnown RBP eCLIP13.48□□□□□ -0.25
NME3-204ENST00000563498 POM121L12Q8N7R1 296 aa13.48□□□□□ -0.25
NME3-204ENST00000563498 GPX8Q8TED1 209 aa13.48□□□□□ -0.25
NME3-204ENST00000563498 Q9H521 79 aa13.48□□□□□ -0.25
NME3-204ENST00000563498 KNCNA6PVL3 124 aa13.47□□□□□ -0.25
NME3-204ENST00000563498 CLN5O75503 358 aa13.47□□□□□ -0.25
NME3-204ENST00000563498 SCGB2A1O75556 95 aa13.47□□□□□ -0.25
NME3-204ENST00000563498 ZNF688P0C7X2 276 aa13.47□□□□□ -0.25
NME3-204ENST00000563498 P0DMU3 169 aa13.47□□□□□ -0.25
NME3-204ENST00000563498 FAM231AP0DMU4 169 aa13.47□□□□□ -0.25
NME3-204ENST00000563498 FAM231CP0DMU5 169 aa13.47□□□□□ -0.25
NME3-204ENST00000563498 SPINK9Q5DT21 86 aa13.47□□□□□ -0.25
NME3-204ENST00000563498 SLC35G3Q8N808 338 aa13.47□□□□□ -0.25
NME3-204ENST00000563498 NARS2Q96I59 477 aaKnown RBP13.47□□□□□ -0.25
NME3-204ENST00000563498 DNAH17Q9UFH2 4485 aa13.46□□□□□ -0.25
NME3-204ENST00000563498 DEFB131BA0A096LNP1 70 aa13.46□□□□□ -0.25
NME3-204ENST00000563498 P0C879 139 aa13.46□□□□□ -0.25
NME3-204ENST00000563498 RNASE2P10153 161 aaKnown RBP13.46□□□□□ -0.25
NME3-204ENST00000563498 C12orf74Q32Q52 190 aa13.46□□□□□ -0.25
NME3-204ENST00000563498 ACTL10Q5JWF8 245 aa13.46□□□□□ -0.25
NME3-204ENST00000563498 OR4X1Q8NH49 305 aa13.46□□□□□ -0.25
NME3-204ENST00000563498 SCPEP1Q9HB40 452 aa13.46□□□□□ -0.25
NME3-204ENST00000563498 AGRNO00468 2067 aa13.46□□□□□ -0.26
NME3-204ENST00000563498 A0A0B4J293 547 aa13.45□□□□□ -0.26
NME3-204ENST00000563498 PRSS29PA6NIE9 313 aa13.45□□□□□ -0.26
NME3-204ENST00000563498 IGKV1-5P01602 117 aa13.45□□□□□ -0.26
NME3-204ENST00000563498 RPS19P39019 145 aaKnown RBP13.45□□□□□ -0.26
NME3-204ENST00000563498 RPL5P46777 297 aaKnown RBP13.45□□□□□ -0.26
NME3-204ENST00000563498 EIF2B2P49770 351 aaKnown RBP13.45□□□□□ -0.26
NME3-204ENST00000563498 RND3P61587 244 aa13.45□□□□□ -0.26
NME3-204ENST00000563498 NEDD8Q15843 81 aa13.45□□□□□ -0.26
NME3-204ENST00000563498 IZUMO4Q1ZYL8 232 aa13.45□□□□□ -0.26
NME3-204ENST00000563498 FNDC4Q9H6D8 234 aaPredicted RBP13.45□□□□□ -0.26
NME3-204ENST00000563498 CLEC5AQ9NY25 188 aa13.45□□□□□ -0.26
NME3-204ENST00000563498 MRPL36Q9P0J6 103 aaKnown RBP13.45□□□□□ -0.26
NME3-204ENST00000563498 CELA1Q9UNI1 258 aa13.45□□□□□ -0.26
NME3-204ENST00000563498 HELTA6NFD8 242 aa13.44□□□□□ -0.26
NME3-204ENST00000563498 ATG12O94817 140 aa13.44□□□□□ -0.26
NME3-204ENST00000563498 IFNA17P01571 189 aa13.44□□□□□ -0.26
NME3-204ENST00000563498 OPRK1P41145 380 aa13.44□□□□□ -0.26
NME3-204ENST00000563498 PPP5CP53041 499 aa13.44□□□□□ -0.26
NME3-204ENST00000563498 TMEM230Q96A57 120 aa13.44□□□□□ -0.26
NME3-204ENST00000563498 ZNF486Q96H40 463 aaPredicted RBP13.44□□□□□ -0.26
NME3-204ENST00000563498 NDUFAF3Q9BU61 184 aa13.44□□□□□ -0.26
NME3-204ENST00000563498 PDCD10Q9BUL8 212 aa13.44□□□□□ -0.26
NME3-204ENST00000563498 C1QTNF4Q9BXJ3 329 aa13.44□□□□□ -0.26
NME3-204ENST00000563498 U3KQE9 123 aa13.44□□□□□ -0.26
NME3-204ENST00000563498 TRAV30A0A087WSZ9 112 aa13.43□□□□□ -0.26
NME3-204ENST00000563498 RTL8CO15255 209 aa13.43□□□□□ -0.26
NME3-204ENST00000563498 IGKV1-17P01599 117 aa13.43□□□□□ -0.26
NME3-204ENST00000563498 RCVRNP35243 200 aa13.43□□□□□ -0.26
NME3-204ENST00000563498 TGFBR1P36897 503 aa13.43□□□□□ -0.26
NME3-204ENST00000563498 AKR1C2P52895 323 aa13.43□□□□□ -0.26
NME3-204ENST00000563498 AP2S1P53680 142 aaPredicted RBP13.43□□□□□ -0.26
NME3-204ENST00000563498 BSXQ3C1V8 233 aa13.43□□□□□ -0.26
NME3-204ENST00000563498 RAB40CQ96S21 281 aa13.43□□□□□ -0.26
NME3-204ENST00000563498 SMIM31A0A1B0GVY4 71 aa13.42□□□□□ -0.26
NME3-204ENST00000563498 HOXA1P49639 335 aaPredicted RBP13.42□□□□□ -0.26
NME3-204ENST00000563498 NUTF2P61970 127 aaKnown RBP13.42□□□□□ -0.26
NME3-204ENST00000563498 DHRS2Q13268 280 aa13.42□□□□□ -0.26
NME3-204ENST00000563498 LGALS9BQ3B8N2 356 aa13.42□□□□□ -0.26
NME3-204ENST00000563498 SEPSECSQ9HD40 501 aaKnown RBP13.42□□□□□ -0.26
NME3-204ENST00000563498 APOA1P02647 267 aa13.41□□□□□ -0.26
NME3-204ENST00000563498 NPY1RP25929 384 aa13.41□□□□□ -0.26
NME3-204ENST00000563498 ETV6P41212 452 aa13.41□□□□□ -0.26
NME3-204ENST00000563498 TIGITQ495A1 244 aa13.41□□□□□ -0.26
NME3-204ENST00000563498 PSMG4Q5JS54 123 aa13.41□□□□□ -0.26
NME3-204ENST00000563498 ZNF767PQ75MW2 155 aa13.41□□□□□ -0.26
NME3-204ENST00000563498 GLMPQ8WWB7 406 aa13.41□□□□□ -0.26
NME3-204ENST00000563498 TP53RKQ96S44 253 aa13.41□□□□□ -0.26
NME3-204ENST00000563498 ENY2Q9NPA8 101 aa13.41□□□□□ -0.26
NME3-204ENST00000563498 DNAH11Q96DT5 4516 aa13.41□□□□□ -0.26
NME3-204ENST00000563498 DYNC1H1Q14204 4646 aaKnown RBP13.4□□□□□ -0.26
NME3-204ENST00000563498 PGAM2P15259 253 aa13.4□□□□□ -0.26
NME3-204ENST00000563498 PIGPP57054 158 aa13.4□□□□□ -0.26
NME3-204ENST00000563498 MLANAQ16655 118 aa13.4□□□□□ -0.26
NME3-204ENST00000563498 C16orf54Q6UWD8 224 aa13.4□□□□□ -0.26
NME3-204ENST00000563498 PKD1P98161 4303 aa13.4□□□□□ -0.27
NME3-204ENST00000563498 C3orf85A0A1B0GTC6 90 aa13.39□□□□□ -0.27
NME3-204ENST00000563498 RPS10-NUDT3A0A1W2PQS6 291 aa13.39□□□□□ -0.27
NME3-204ENST00000563498 HNRNPCP07910 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
NME3-204ENST00000563498 SNRPD3P62318 126 aaKnown RBP13.39□□□□□ -0.27
NME3-204ENST00000563498 LHFPL1Q86WI0 220 aa13.39□□□□□ -0.27
NME3-204ENST00000563498 SNX29P2Q8IUI4 249 aa13.39□□□□□ -0.27
NME3-204ENST00000563498 OR1S2Q8NGQ3 325 aa13.39□□□□□ -0.27
NME3-204ENST00000563498 Q8WTZ3 238 aa13.39□□□□□ -0.27
NME3-204ENST00000563498 NEU1Q99519 415 aa13.39□□□□□ -0.27
NME3-204ENST00000563498 H3BMM0 161 aa13.38□□□□□ -0.27
NME3-204ENST00000563498 M0QYG6 137 aa13.38□□□□□ -0.27
NME3-204ENST00000563498 M0R2N4 97 aa13.38□□□□□ -0.27
NME3-204ENST00000563498 CD74P04233 296 aa13.38□□□□□ -0.27
NME3-204ENST00000563498 IGLC1P0CG04 106 aa13.38□□□□□ -0.27
NME3-204ENST00000563498 PI3P19957 117 aa13.38□□□□□ -0.27
NME3-204ENST00000563498 HTR2BP41595 481 aa13.38□□□□□ -0.27
NME3-204ENST00000563498 YPEL3P61236 119 aaPredicted RBP13.38□□□□□ -0.27
NME3-204ENST00000563498 AARDQ4LEZ3 155 aa13.38□□□□□ -0.27
NME3-204ENST00000563498 RRNAD1Q96FB5 475 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms