RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 CCR2P41597 374 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 TMEM258P61165 79 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 RPL19P84098 196 aaKnown RBP0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 TAF1AQ15573 450 aaPredicted RBP0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 LINC01554Q52M75 96 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 FAM27BQ5VT28 67 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 HACD4Q5VWC8 232 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 ZNF826PQ6ZT77 177 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 LCA10Q71F78 164 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 KTN1-AS1Q86SY8 53 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 TRAPPC6BQ86SZ2 158 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 C9orf163Q8N9P6 203 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 NUP35Q8NFH5 326 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 OR4X2Q8NGF9 303 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 OR4D11Q8NGI4 311 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 OR51T1Q8NGJ9 327 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 SPACA4Q8TDM5 124 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 TIMM21Q9BVV7 248 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 PBOV1Q9GZY1 135 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 CYSTM1Q9H1C7 97 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 SLC39A9Q9NUM3 307 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 NHP2Q9NX24 153 aaKnown RBP0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 OPTCQ9UBM4 332 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 CKLFQ9UBR5 152 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 NAT8Q9UHE5 227 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 SMPXQ9UHP9 88 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 EPDR1Q9UM22 224 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 SOX21Q9Y651 276 aaPredicted RBP0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 KIF1BO60333 1816 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 NCKAP5O14513 1909 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 CPAMD8Q8IZJ3 1885 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 C7orf71A4D174 169 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 HMSDA8MTL9 139 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 IBA57-AS1B1ANH7 110 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 TRAPPC2LH3BP13 241 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 PIAS1O75925 651 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 ATG12O94817 140 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 IFNA7P01567 189 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 OR4E1P0C645 316 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 P0DMU3 169 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 FAM231AP0DMU4 169 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 FAM231CP0DMU5 169 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 ERP29P30040 261 aaKnown RBP0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 HINT1P49773 126 aaPredicted RBP0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 VBP1P61758 197 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 SUPT4H1P63272 117 aaKnown RBP0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 KISS1Q15726 138 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 RRN3P1Q2M238 152 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 SCGB2B2Q4G0G5 96 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 Q6ZSA8 131 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 HIST3H2BBQ8N257 126 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 SIGLECL1Q8N7X8 197 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 TMEM106AQ96A25 262 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 DGCR14Q96DF8 476 aaKnown RBP0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 SLAMF6Q96DU3 332 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 CEP19Q96LK0 163 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 TEX37Q96LM6 180 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 GINS3Q9BRX5 216 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 TMEM70Q9BUB7 260 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 YIPF3Q9GZM5 350 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 ENY2Q9NPA8 101 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 LYRM2Q9NU23 88 aaPredicted RBP0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 PRNDQ9UKY0 176 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 BAIAP2Q9UQB8 552 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 ERGIC3Q9Y282 383 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 FAM32AQ9Y421 112 aaKnown RBP0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 STRCQ7RTU9 1775 aa0.74□□□□□ -2.29
HMGB1P33-201ENST00000563485 SBF1O95248 1867 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 ZNF106Q9H2Y7 1883 aaKnown RBP0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 YTHDC2Q9H6S0 1430 aaKnown RBP0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 KIF24Q5T7B8 1368 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 A0A087X0T9 212 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 J3QQQ9 107 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 CTSDP07339 412 aaPredicted RBP0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 BAALC-AS2P0C853 105 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 MIFP14174 115 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 S100A4P26447 101 aaKnown RBP0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 PIGPP57054 158 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 RPL26P61254 145 aaKnown RBP0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 B2MP61769 119 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 HES1Q14469 280 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 ZNF345Q14585 488 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 Q1T7F1 81 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 SPANXN5Q5MJ07 72 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 AKR1C8PQ5T2L2 129 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 LYRM7Q5U5X0 104 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 LCN15Q6UWW0 184 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 Q6ZRN7 208 aaPredicted RBP0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 OR8B3Q8NGG8 313 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 RNASE11Q8TAA1 199 aaKnown RBP0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 SLC25A40Q8TBP6 338 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 CANT1Q8WVQ1 401 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 MBD3L1Q8WWY6 194 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 ADAT3Q96EY9 351 aaPredicted RBP0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 PHB2Q99623 299 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 RTL8AQ9BWD3 113 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 BIN3Q9NQY0 253 aa0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 RPL26L1Q9UNX3 145 aaKnown RBP0.73□□□□□ -2.29
HMGB1P33-201ENST00000563485 HS3ST2Q9Y278 367 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms