RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 MFSD2BA6NFX1 497 aa11.96□□□□□ -0.49
USB1-208ENST00000563207 CCSO14618 274 aa11.96□□□□□ -0.49
USB1-208ENST00000563207 SSNA1O43805 119 aa11.96□□□□□ -0.49
USB1-208ENST00000563207 SAP30O75446 220 aa11.96□□□□□ -0.49
USB1-208ENST00000563207 RAB11AP62491 216 aa11.96□□□□□ -0.49
USB1-208ENST00000563207 CYCSP99999 105 aaKnown RBP11.96□□□□□ -0.49
USB1-208ENST00000563207 ETFRF1Q6IPR1 90 aa11.96□□□□□ -0.49
USB1-208ENST00000563207 SPSB3Q6PJ21 355 aa11.96□□□□□ -0.49
USB1-208ENST00000563207 CCDC140Q96MF4 163 aa11.96□□□□□ -0.49
USB1-208ENST00000563207 RAB40CQ96S21 281 aa11.96□□□□□ -0.49
USB1-208ENST00000563207 ZMAT5Q9UDW3 170 aaKnown RBP11.96□□□□□ -0.49
USB1-208ENST00000563207 GGCTO75223 188 aaKnown RBP11.95□□□□□ -0.5
USB1-208ENST00000563207 MT-CO2P00403 227 aa11.95□□□□□ -0.5
USB1-208ENST00000563207 CLEC3BP05452 202 aa11.95□□□□□ -0.5
USB1-208ENST00000563207 NHLRC4P0CG21 123 aaPredicted RBP11.95□□□□□ -0.5
USB1-208ENST00000563207 MFAP4P55083 255 aa11.95□□□□□ -0.5
USB1-208ENST00000563207 TAS2R30P59541 319 aa11.95□□□□□ -0.5
USB1-208ENST00000563207 POLR2GP62487 172 aaKnown RBP eCLIP11.95□□□□□ -0.5
USB1-208ENST00000563207 RPEL1Q2QD12 228 aa11.95□□□□□ -0.5
USB1-208ENST00000563207 CLEC19AQ6UXS0 136 aa11.95□□□□□ -0.5
USB1-208ENST00000563207 SBSPONQ8IVN8 264 aa11.95□□□□□ -0.5
USB1-208ENST00000563207 PINX1Q96BK5 328 aaKnown RBP11.95□□□□□ -0.5
USB1-208ENST00000563207 BSCL2Q96G97 398 aaPredicted RBP11.95□□□□□ -0.5
USB1-208ENST00000563207 SMIM8Q96KF7 97 aa11.95□□□□□ -0.5
USB1-208ENST00000563207 MAGT1Q9H0U3 335 aa11.95□□□□□ -0.5
USB1-208ENST00000563207 BMPR1BO00238 502 aa11.94□□□□□ -0.5
USB1-208ENST00000563207 IAPPP10997 89 aa11.94□□□□□ -0.5
USB1-208ENST00000563207 SLC25A4P12235 298 aa11.94□□□□□ -0.5
USB1-208ENST00000563207 ARL3P36405 182 aa11.94□□□□□ -0.5
USB1-208ENST00000563207 OPRK1P41145 380 aa11.94□□□□□ -0.5
USB1-208ENST00000563207 NPBWR1P48145 328 aa11.94□□□□□ -0.5
USB1-208ENST00000563207 ACSM6Q6P461 480 aa11.94□□□□□ -0.5
USB1-208ENST00000563207 NMES1Q9C002 83 aa11.94□□□□□ -0.5
USB1-208ENST00000563207 ALG5Q9Y673 324 aa11.94□□□□□ -0.5
USB1-208ENST00000563207 SORL1Q92673 2214 aa11.93□□□□□ -0.5
USB1-208ENST00000563207 GOSR2O14653 212 aa11.93□□□□□ -0.5
USB1-208ENST00000563207 TGOLN2O43493 480 aa11.93□□□□□ -0.5
USB1-208ENST00000563207 SCGB2A1O75556 95 aa11.93□□□□□ -0.5
USB1-208ENST00000563207 SCGB1D2O95969 90 aa11.93□□□□□ -0.5
USB1-208ENST00000563207 MBPP02686 304 aaPredicted RBP11.93□□□□□ -0.5
USB1-208ENST00000563207 IFNA4P05014 189 aa11.93□□□□□ -0.5
USB1-208ENST00000563207 GPX4P36969 197 aaPredicted RBP11.93□□□□□ -0.5
USB1-208ENST00000563207 INSL3P51460 131 aa11.93□□□□□ -0.5
USB1-208ENST00000563207 IL15RAQ13261 267 aa11.93□□□□□ -0.5
USB1-208ENST00000563207 KLF5Q13887 457 aaPredicted RBP11.93□□□□□ -0.5
USB1-208ENST00000563207 GPHB5Q86YW7 130 aa11.93□□□□□ -0.5
USB1-208ENST00000563207 TMEM170AQ8WVE7 144 aa11.93□□□□□ -0.5
USB1-208ENST00000563207 CACNG8Q8WXS5 425 aa11.93□□□□□ -0.5
USB1-208ENST00000563207 STRAPQ9Y3F4 350 aaKnown RBP11.93□□□□□ -0.5
USB1-208ENST00000563207 SMAD5-AS1Q9Y6J3 95 aa11.93□□□□□ -0.5
USB1-208ENST00000563207 SSSCA1O60232 199 aa11.92□□□□□ -0.5
USB1-208ENST00000563207 TSC22D2O75157 780 aa11.92□□□□□ -0.5
USB1-208ENST00000563207 TRBV12-3P01733 135 aa11.92□□□□□ -0.5
USB1-208ENST00000563207 IGHV3-23P01764 117 aa11.92□□□□□ -0.5
USB1-208ENST00000563207 GP9P14770 177 aa11.92□□□□□ -0.5
USB1-208ENST00000563207 PVALBP20472 110 aaPredicted RBP11.92□□□□□ -0.5
USB1-208ENST00000563207 GPR183P32249 361 aa11.92□□□□□ -0.5
USB1-208ENST00000563207 FAM106AQ4KMX7 169 aa11.92□□□□□ -0.5
USB1-208ENST00000563207 Q56UQ5 140 aa11.92□□□□□ -0.5
USB1-208ENST00000563207 OR4X1Q8NH49 305 aa11.92□□□□□ -0.5
USB1-208ENST00000563207 FNDC4Q9H6D8 234 aaPredicted RBP11.92□□□□□ -0.5
USB1-208ENST00000563207 PSENENQ9NZ42 101 aa11.92□□□□□ -0.5
USB1-208ENST00000563207 S4R3C0 116 aa11.92□□□□□ -0.5
USB1-208ENST00000563207 TRAV30A0A087WSZ9 112 aa11.91□□□□□ -0.5
USB1-208ENST00000563207 IGHV3-21A0A0B4J1V1 117 aa11.91□□□□□ -0.5
USB1-208ENST00000563207 OR2T8A6NH00 312 aa11.91□□□□□ -0.5
USB1-208ENST00000563207 C15orf62A8K5M9 175 aa11.91□□□□□ -0.5
USB1-208ENST00000563207 PPP5D1E7EU14 171 aa11.91□□□□□ -0.5
USB1-208ENST00000563207 F8W735 103 aaPredicted RBP11.91□□□□□ -0.5
USB1-208ENST00000563207 K7EPK0 472 aa11.91□□□□□ -0.5
USB1-208ENST00000563207 NUPL2O15504 423 aaKnown RBP11.91□□□□□ -0.5
USB1-208ENST00000563207 GNG7O60262 68 aa11.91□□□□□ -0.5
USB1-208ENST00000563207 SCAF4O95104 1147 aaKnown RBP11.91□□□□□ -0.5
USB1-208ENST00000563207 FRMD6-AS1P0C7T7 363 aa11.91□□□□□ -0.5
USB1-208ENST00000563207 SPANXN5Q5MJ07 72 aa11.91□□□□□ -0.5
USB1-208ENST00000563207 UBAC2Q8NBM4 344 aa11.91□□□□□ -0.5
USB1-208ENST00000563207 TMEM116Q8NCL8 245 aa11.91□□□□□ -0.5
USB1-208ENST00000563207 MED28Q9H204 178 aa11.91□□□□□ -0.5
USB1-208ENST00000563207 MGAT4CQ9UBM8 478 aa11.91□□□□□ -0.5
USB1-208ENST00000563207 RCL1Q9Y2P8 373 aaKnown RBP11.91□□□□□ -0.5
USB1-208ENST00000563207 STAB2Q8WWQ8 2551 aa11.9□□□□□ -0.5
USB1-208ENST00000563207 L7N2F9 121 aa11.9□□□□□ -0.5
USB1-208ENST00000563207 LGALS9O00182 355 aa11.9□□□□□ -0.5
USB1-208ENST00000563207 CLN5O75503 358 aa11.9□□□□□ -0.5
USB1-208ENST00000563207 RLN2P04090 185 aa11.9□□□□□ -0.5
USB1-208ENST00000563207 CTSGP08311 255 aa11.9□□□□□ -0.5
USB1-208ENST00000563207 PAX9P55771 341 aa11.9□□□□□ -0.5
USB1-208ENST00000563207 VAMP2P63027 116 aa11.9□□□□□ -0.5
USB1-208ENST00000563207 RELQ04864 619 aaPredicted RBP11.9□□□□□ -0.5
USB1-208ENST00000563207 ASB13Q8WXK3 278 aa11.9□□□□□ -0.5
USB1-208ENST00000563207 ELOVL1Q9BW60 279 aa11.9□□□□□ -0.5
USB1-208ENST00000563207 PEMTQ9UBM1 199 aa11.9□□□□□ -0.5
USB1-208ENST00000563207 NDUFA4O00483 81 aa11.89□□□□□ -0.51
USB1-208ENST00000563207 OR2C1O95371 312 aa11.89□□□□□ -0.51
USB1-208ENST00000563207 SIX6O95475 246 aa11.89□□□□□ -0.51
USB1-208ENST00000563207 TMEM50AO95807 157 aa11.89□□□□□ -0.51
USB1-208ENST00000563207 H2BFSP57053 126 aa11.89□□□□□ -0.51
USB1-208ENST00000563207 SYNJ2BPP57105 145 aa11.89□□□□□ -0.51
USB1-208ENST00000563207 RAB32Q13637 225 aa11.89□□□□□ -0.51
USB1-208ENST00000563207 PRSS54Q6PEW0 395 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms