RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 UXS1Q8NBZ7 420 aa14.09□□□□□ -0.15
CDH11-206ENST00000562998 MRPL36Q9P0J6 103 aaKnown RBP14.09□□□□□ -0.15
CDH11-206ENST00000562998 MRPL27Q9P0M9 148 aaKnown RBP14.09□□□□□ -0.15
CDH11-206ENST00000562998 K7EMT4 169 aa14.08□□□□□ -0.16
CDH11-206ENST00000562998 NUPL2O15504 423 aaKnown RBP14.08□□□□□ -0.16
CDH11-206ENST00000562998 NXPH3O95157 252 aa14.08□□□□□ -0.16
CDH11-206ENST00000562998 LYG2Q86SG7 212 aa14.08□□□□□ -0.16
CDH11-206ENST00000562998 DUSP18Q8NEJ0 188 aa14.08□□□□□ -0.16
CDH11-206ENST00000562998 SLC24A4Q8NFF2 622 aa14.08□□□□□ -0.16
CDH11-206ENST00000562998 OR10C1Q96KK4 312 aa14.08□□□□□ -0.16
CDH11-206ENST00000562998 RBKSQ9H477 322 aa14.08□□□□□ -0.16
CDH11-206ENST00000562998 DAZ1Q9NQZ3 744 aaKnown RBP14.08□□□□□ -0.16
CDH11-206ENST00000562998 C15orf62A8K5M9 175 aa14.07□□□□□ -0.16
CDH11-206ENST00000562998 A8MZ25 164 aa14.07□□□□□ -0.16
CDH11-206ENST00000562998 FAM90A26D6RGX4 464 aa14.07□□□□□ -0.16
CDH11-206ENST00000562998 TMEM50AO95807 157 aa14.07□□□□□ -0.16
CDH11-206ENST00000562998 ANXA7P20073 488 aaKnown RBP14.07□□□□□ -0.16
CDH11-206ENST00000562998 NPBWR1P48145 328 aa14.07□□□□□ -0.16
CDH11-206ENST00000562998 RELQ04864 619 aaPredicted RBP14.07□□□□□ -0.16
CDH11-206ENST00000562998 OR4X1Q8NH49 305 aa14.07□□□□□ -0.16
CDH11-206ENST00000562998 RNASEH2CQ8TDP1 164 aaKnown RBP14.07□□□□□ -0.16
CDH11-206ENST00000562998 DTD1Q8TEA8 209 aa14.07□□□□□ -0.16
CDH11-206ENST00000562998 DYNLRB2Q8TF09 96 aa14.07□□□□□ -0.16
CDH11-206ENST00000562998 HIPK2Q9H2X6 1198 aa14.07□□□□□ -0.16
CDH11-206ENST00000562998 TBC1D24Q9ULP9 559 aa14.07□□□□□ -0.16
CDH11-206ENST00000562998 GNG7O60262 68 aa14.06□□□□□ -0.16
CDH11-206ENST00000562998 TCRBP04435 133 aa14.06□□□□□ -0.16
CDH11-206ENST00000562998 GGNBP1Q5YKI7 109 aa14.06□□□□□ -0.16
CDH11-206ENST00000562998 TMEM61Q8N0U2 210 aa14.06□□□□□ -0.16
CDH11-206ENST00000562998 OR1S1Q8NH92 325 aa14.06□□□□□ -0.16
CDH11-206ENST00000562998 C20orf85Q9H1P6 137 aa14.06□□□□□ -0.16
CDH11-206ENST00000562998 U3KQ87 197 aa14.06□□□□□ -0.16
CDH11-206ENST00000562998 CLN5O75503 358 aa14.05□□□□□ -0.16
CDH11-206ENST00000562998 HOXB5P09067 269 aa14.05□□□□□ -0.16
CDH11-206ENST00000562998 NPY1RP25929 384 aa14.05□□□□□ -0.16
CDH11-206ENST00000562998 OPRK1P41145 380 aa14.05□□□□□ -0.16
CDH11-206ENST00000562998 CD69Q07108 199 aa14.05□□□□□ -0.16
CDH11-206ENST00000562998 TMEM116Q8NCL8 245 aa14.05□□□□□ -0.16
CDH11-206ENST00000562998 C19orf73Q9NVV2 129 aa14.05□□□□□ -0.16
CDH11-206ENST00000562998 ADAP1O75689 374 aa14.04□□□□□ -0.16
CDH11-206ENST00000562998 ATP5IP56385 69 aaPredicted RBP14.04□□□□□ -0.16
CDH11-206ENST00000562998 ASAH1Q13510 395 aa14.04□□□□□ -0.16
CDH11-206ENST00000562998 BTNL8Q6UX41 500 aa14.04□□□□□ -0.16
CDH11-206ENST00000562998 NOXA1Q86UR1 476 aa14.04□□□□□ -0.16
CDH11-206ENST00000562998 MITD1Q8WV92 249 aa14.04□□□□□ -0.16
CDH11-206ENST00000562998 WDR89Q96FK6 387 aaPredicted RBP14.04□□□□□ -0.16
CDH11-206ENST00000562998 WDR12Q9GZL7 423 aaKnown RBP14.04□□□□□ -0.16
CDH11-206ENST00000562998 ZFAND3Q9H8U3 227 aa14.04□□□□□ -0.16
CDH11-206ENST00000562998 IGHV3OR16-8A0A075B7F1 116 aa14.03□□□□□ -0.16
CDH11-206ENST00000562998 TRAV25A0A0B4J276 109 aa14.03□□□□□ -0.16
CDH11-206ENST00000562998 RPS10-NUDT3A0A1W2PQS6 291 aa14.03□□□□□ -0.16
CDH11-206ENST00000562998 MPTX1A8MV57 137 aa14.03□□□□□ -0.16
CDH11-206ENST00000562998 IGKV1-17P01599 117 aa14.03□□□□□ -0.16
CDH11-206ENST00000562998 FRMD6-AS1P0C7T7 363 aa14.03□□□□□ -0.16
CDH11-206ENST00000562998 IGHV4-30-4P0DP06 118 aa14.03□□□□□ -0.16
CDH11-206ENST00000562998 SLC25A4P12235 298 aa14.03□□□□□ -0.16
CDH11-206ENST00000562998 IFITM3Q01628 133 aa14.03□□□□□ -0.16
CDH11-206ENST00000562998 ZNF846Q147U1 533 aa14.03□□□□□ -0.16
CDH11-206ENST00000562998 PRSS54Q6PEW0 395 aa14.03□□□□□ -0.16
CDH11-206ENST00000562998 TOMM20LQ6UXN7 152 aa14.03□□□□□ -0.16
CDH11-206ENST00000562998 ZNF600Q6ZNG1 722 aa14.03□□□□□ -0.16
CDH11-206ENST00000562998 COQ8AQ8NI60 647 aa14.03□□□□□ -0.16
CDH11-206ENST00000562998 C20orf24Q9BUV8 137 aa14.03□□□□□ -0.16
CDH11-206ENST00000562998 SMPXQ9UHP9 88 aa14.03□□□□□ -0.16
CDH11-206ENST00000562998 UPK1BO75841 260 aa14.02□□□□□ -0.17
CDH11-206ENST00000562998 IFNA10P01566 189 aa14.02□□□□□ -0.17
CDH11-206ENST00000562998 NHLRC4P0CG21 123 aaPredicted RBP14.02□□□□□ -0.17
CDH11-206ENST00000562998 ID3Q02535 119 aa14.02□□□□□ -0.17
CDH11-206ENST00000562998 C4orf46Q504U0 113 aa14.02□□□□□ -0.17
CDH11-206ENST00000562998 GTSCR1Q86UQ5 136 aa14.02□□□□□ -0.17
CDH11-206ENST00000562998 SELENOKQ9Y6D0 94 aa14.02□□□□□ -0.17
CDH11-206ENST00000562998 IGHV7-4-1A0A0J9YVY3 117 aa14.01□□□□□ -0.17
CDH11-206ENST00000562998 ZNF207O43670 478 aaKnown RBP14.01□□□□□ -0.17
CDH11-206ENST00000562998 CD7P09564 240 aa14.01□□□□□ -0.17
CDH11-206ENST00000562998 IGLC1P0CG04 106 aa14.01□□□□□ -0.17
CDH11-206ENST00000562998 SBSPONQ8IVN8 264 aa14.01□□□□□ -0.17
CDH11-206ENST00000562998 OR52B4Q8NGK2 314 aa14.01□□□□□ -0.17
CDH11-206ENST00000562998 OR4D5Q8NGN0 318 aa14.01□□□□□ -0.17
CDH11-206ENST00000562998 NUDT15Q9NV35 164 aa14.01□□□□□ -0.17
CDH11-206ENST00000562998 HUWE1Q7Z6Z7 4374 aaKnown RBP14.01□□□□□ -0.17
CDH11-206ENST00000562998 TRAV30A0A087WSZ9 112 aa14□□□□□ -0.17
CDH11-206ENST00000562998 TSPAN4O14817 238 aa14□□□□□ -0.17
CDH11-206ENST00000562998 SYNGR2O43760 224 aa14□□□□□ -0.17
CDH11-206ENST00000562998 MED6O75586 246 aa14□□□□□ -0.17
CDH11-206ENST00000562998 RND2P52198 227 aa14□□□□□ -0.17
CDH11-206ENST00000562998 ETFRF1Q6IPR1 90 aa14□□□□□ -0.17
CDH11-206ENST00000562998 NEURL2Q9BR09 285 aa14□□□□□ -0.17
CDH11-206ENST00000562998 PUS1Q9Y606 427 aaKnown RBP eCLIP14□□□□□ -0.17
CDH11-206ENST00000562998 TRAV6A0A075B6T7 132 aa13.99□□□□□ -0.17
CDH11-206ENST00000562998 TRAV14DV4A0A0A6YYC5 116 aa13.99□□□□□ -0.17
CDH11-206ENST00000562998 CHEK1O14757 476 aa13.99□□□□□ -0.17
CDH11-206ENST00000562998 YIF1AO95070 293 aa13.99□□□□□ -0.17
CDH11-206ENST00000562998 SCAF4O95104 1147 aaKnown RBP13.99□□□□□ -0.17
CDH11-206ENST00000562998 CD81P60033 236 aa13.99□□□□□ -0.17
CDH11-206ENST00000562998 GUCA2BQ16661 112 aa13.99□□□□□ -0.17
CDH11-206ENST00000562998 LINC00322Q6ZN03 302 aaPredicted RBP13.99□□□□□ -0.17
CDH11-206ENST00000562998 CIB3Q96Q77 187 aaPredicted RBP13.99□□□□□ -0.17
CDH11-206ENST00000562998 VSIRQ9H7M9 311 aa13.99□□□□□ -0.17
CDH11-206ENST00000562998 PRSS46E5RG02 174 aa13.98□□□□□ -0.17
CDH11-206ENST00000562998 IFNA21P01568 189 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms