RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 COMMD7Q86VX2 200 aa11.25□□□□□ -0.61
COMMD4-205ENST00000562310 TMEM116Q8NCL8 245 aa11.25□□□□□ -0.61
COMMD4-205ENST00000562310 ZNF48Q96MX3 618 aaPredicted RBP11.25□□□□□ -0.61
COMMD4-205ENST00000562310 TMUB1Q9BVT8 246 aa11.25□□□□□ -0.61
COMMD4-205ENST00000562310 DMRT1Q9Y5R6 373 aa11.25□□□□□ -0.61
COMMD4-205ENST00000562310 PXMP4Q9Y6I8 212 aa11.25□□□□□ -0.61
COMMD4-205ENST00000562310 MAP1AP78559 2803 aaPredicted RBP11.25□□□□□ -0.61
COMMD4-205ENST00000562310 TRAV41A0A0B4J266 112 aa11.24□□□□□ -0.61
COMMD4-205ENST00000562310 TEX46H3BTG2 121 aa11.24□□□□□ -0.61
COMMD4-205ENST00000562310 HBE1P02100 147 aa11.24□□□□□ -0.61
COMMD4-205ENST00000562310 RIPPLY3P57055 190 aa11.24□□□□□ -0.61
COMMD4-205ENST00000562310 RAB2AP61019 212 aa11.24□□□□□ -0.61
COMMD4-205ENST00000562310 SELENOTP62341 195 aa11.24□□□□□ -0.61
COMMD4-205ENST00000562310 C9orf152Q5JTZ5 239 aa11.24□□□□□ -0.61
COMMD4-205ENST00000562310 ACSM6Q6P461 480 aa11.24□□□□□ -0.61
COMMD4-205ENST00000562310 IL34Q6ZMJ4 242 aa11.24□□□□□ -0.61
COMMD4-205ENST00000562310 C19orf35Q6ZS72 473 aa11.24□□□□□ -0.61
COMMD4-205ENST00000562310 COMMD1Q8N668 190 aa11.24□□□□□ -0.61
COMMD4-205ENST00000562310 OR2T6Q8NHC8 308 aa11.24□□□□□ -0.61
COMMD4-205ENST00000562310 RFNGQ9Y644 331 aa11.24□□□□□ -0.61
COMMD4-205ENST00000562310 SH2D7A6NKC9 451 aaPredicted RBP11.23□□□□□ -0.61
COMMD4-205ENST00000562310 K7EIM0 57 aa11.23□□□□□ -0.61
COMMD4-205ENST00000562310 AP4M1O00189 453 aa11.23□□□□□ -0.61
COMMD4-205ENST00000562310 ATP6V1G1O75348 118 aa11.23□□□□□ -0.61
COMMD4-205ENST00000562310 SCGB2A1O75556 95 aa11.23□□□□□ -0.61
COMMD4-205ENST00000562310 M6PRP20645 277 aa11.23□□□□□ -0.61
COMMD4-205ENST00000562310 OR10J1P30954 320 aa11.23□□□□□ -0.61
COMMD4-205ENST00000562310 B2MP61769 119 aa11.23□□□□□ -0.61
COMMD4-205ENST00000562310 C19orf54Q5BKX5 351 aa11.23□□□□□ -0.61
COMMD4-205ENST00000562310 RBMS3Q6XE24 437 aaKnown RBP11.23□□□□□ -0.61
COMMD4-205ENST00000562310 SLC7A5P1Q8MH63 180 aa11.23□□□□□ -0.61
COMMD4-205ENST00000562310 STPG3Q8N7X2 389 aa11.23□□□□□ -0.61
COMMD4-205ENST00000562310 OR4X1Q8NH49 305 aa11.23□□□□□ -0.61
COMMD4-205ENST00000562310 LYPD6BQ8NI32 183 aa11.23□□□□□ -0.61
COMMD4-205ENST00000562310 NPIPB3Q92617 1050 aa11.23□□□□□ -0.61
COMMD4-205ENST00000562310 FANCD2OSQ96PS1 177 aa11.23□□□□□ -0.61
COMMD4-205ENST00000562310 TRGV9Q99603 122 aa11.23□□□□□ -0.61
COMMD4-205ENST00000562310 RPRMQ9NS64 109 aa11.23□□□□□ -0.61
COMMD4-205ENST00000562310 SLC45A2Q9UMX9 530 aa11.23□□□□□ -0.61
COMMD4-205ENST00000562310 IGKV1OR2-108A0A075B7D4 117 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 TRAV1-1A0A0B4J248 108 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 TCRBV4S1A1TA0A5B7 111 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 ZFP92A6NM28 416 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 H3BUA1 57 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 HOXA3O43365 443 aaPredicted RBP11.22□□□□□ -0.61
COMMD4-205ENST00000562310 BRI3O95415 125 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 FABP1P07148 127 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 H2AFB1P0C5Y9 115 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 PRR20EP86478 221 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 PRR20CP86479 221 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 PRR20DP86480 221 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 PRR20BP86481 221 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 PRR20AP86496 221 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 MLANAQ16655 118 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 MIC13Q5XKP0 118 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 CYP2G1PQ6ZSU1 146 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 SIGLECL1Q8N7X8 197 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 OR5T1Q8NG75 326 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 OR10G4Q8NGN3 311 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 OR10G9Q8NGN4 311 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 OR10G7Q8NGN6 311 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 VN1R17PQ8TDU5 208 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 ACTR3CQ9C0K3 210 aaPredicted RBP11.22□□□□□ -0.61
COMMD4-205ENST00000562310 NPFFR1Q9GZQ6 430 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 HRH4Q9H3N8 390 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 SLC39A9Q9NUM3 307 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 ZANQ9Y493 2812 aa11.22□□□□□ -0.61
COMMD4-205ENST00000562310 CTXND1A0A1B0GTU2 59 aa11.21□□□□□ -0.61
COMMD4-205ENST00000562310 RAB19A4D1S5 217 aa11.21□□□□□ -0.61
COMMD4-205ENST00000562310 SEC14L6B5MCN3 397 aa11.21□□□□□ -0.61
COMMD4-205ENST00000562310 FOSL1P15407 271 aa11.21□□□□□ -0.61
COMMD4-205ENST00000562310 NPBWR1P48145 328 aa11.21□□□□□ -0.61
COMMD4-205ENST00000562310 FHITP49789 147 aa11.21□□□□□ -0.61
COMMD4-205ENST00000562310 MFAP4P55083 255 aa11.21□□□□□ -0.61
COMMD4-205ENST00000562310 IL17RELQ6ZVW7 336 aa11.21□□□□□ -0.61
COMMD4-205ENST00000562310 EIF4E3Q8N5X7 224 aaKnown RBP11.21□□□□□ -0.61
COMMD4-205ENST00000562310 MARC2Q969Z3 335 aa11.21□□□□□ -0.61
COMMD4-205ENST00000562310 RCC1LQ96I51 464 aaKnown RBP11.21□□□□□ -0.61
COMMD4-205ENST00000562310 C19orf24Q9BVV8 132 aa11.21□□□□□ -0.61
COMMD4-205ENST00000562310 TNFRSF19Q9NS68 423 aa11.21□□□□□ -0.61
COMMD4-205ENST00000562310 TRAV30A0A087WSZ9 112 aa11.2□□□□□ -0.62
COMMD4-205ENST00000562310 TRBV9A0A0B4J1U6 114 aa11.2□□□□□ -0.62
COMMD4-205ENST00000562310 MFSD2BA6NFX1 497 aa11.2□□□□□ -0.62
COMMD4-205ENST00000562310 FAM223BA6NKX1 122 aa11.2□□□□□ -0.62
COMMD4-205ENST00000562310 CLN5O75503 358 aa11.2□□□□□ -0.62
COMMD4-205ENST00000562310 YIF1AO95070 293 aa11.2□□□□□ -0.62
COMMD4-205ENST00000562310 FCGR2BP31994 310 aaPredicted RBP11.2□□□□□ -0.62
COMMD4-205ENST00000562310 CDC34P49427 236 aaPredicted RBP11.2□□□□□ -0.62
COMMD4-205ENST00000562310 FAM223AQ8IWN6 122 aa11.2□□□□□ -0.62
COMMD4-205ENST00000562310 NECAP1Q8NC96 275 aa11.2□□□□□ -0.62
COMMD4-205ENST00000562310 MBD3L1Q8WWY6 194 aa11.2□□□□□ -0.62
COMMD4-205ENST00000562310 RNF2Q99496 336 aa11.2□□□□□ -0.62
COMMD4-205ENST00000562310 TXN2Q99757 166 aa11.2□□□□□ -0.62
COMMD4-205ENST00000562310 PRSS22Q9GZN4 317 aa11.2□□□□□ -0.62
COMMD4-205ENST00000562310 VSIRQ9H7M9 311 aa11.2□□□□□ -0.62
COMMD4-205ENST00000562310 GAR1Q9NY12 217 aaKnown RBP11.2□□□□□ -0.62
COMMD4-205ENST00000562310 MRPL36Q9P0J6 103 aaKnown RBP11.2□□□□□ -0.62
COMMD4-205ENST00000562310 FBXL7Q9UJT9 491 aa11.2□□□□□ -0.62
COMMD4-205ENST00000562310 VPS13CQ709C8 3753 aa11.2□□□□□ -0.62
COMMD4-205ENST00000562310 IGKV1D-37A0A075B6S9 117 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms