RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 ZNF337Q9Y3M9 751 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 SONP18583 2426 aaKnown RBP2.72□□□□□ -1.97
SMG1-204ENST00000561940 ZGRF1Q86YA3 2104 aa2.71□□□□□ -1.98
SMG1-204ENST00000561940 KIAA1549LQ6ZVL6 1849 aa2.71□□□□□ -1.98
SMG1-204ENST00000561940 DHRS12A0PJE2 317 aa2.71□□□□□ -1.98
SMG1-204ENST00000561940 AHSA1O95433 338 aa2.71□□□□□ -1.98
SMG1-204ENST00000561940 CA7P43166 264 aa2.71□□□□□ -1.98
SMG1-204ENST00000561940 CDK9P50750 372 aaKnown RBP2.71□□□□□ -1.98
SMG1-204ENST00000561940 TAS2R45P59539 299 aa2.71□□□□□ -1.98
SMG1-204ENST00000561940 GNA13Q14344 377 aa2.71□□□□□ -1.98
SMG1-204ENST00000561940 TMEM86AQ8N2M4 240 aa2.71□□□□□ -1.98
SMG1-204ENST00000561940 SGMS2Q8NHU3 365 aa2.71□□□□□ -1.98
SMG1-204ENST00000561940 JOSD2Q8TAC2 188 aa2.71□□□□□ -1.98
SMG1-204ENST00000561940 RNF133Q8WVZ7 376 aa2.71□□□□□ -1.98
SMG1-204ENST00000561940 LXNQ9BS40 222 aa2.71□□□□□ -1.98
SMG1-204ENST00000561940 MAP1LC3AQ9H492 121 aa2.71□□□□□ -1.98
SMG1-204ENST00000561940 TUBA4BQ9H853 241 aa2.71□□□□□ -1.98
SMG1-204ENST00000561940 HHLA2Q9UM44 414 aa2.71□□□□□ -1.98
SMG1-204ENST00000561940 POLR1DQ9Y2S0 133 aa2.71□□□□□ -1.98
SMG1-204ENST00000561940 MXRA5Q9NR99 2828 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 A0A0D9SFI3 127 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 TLCD2A6NGC4 264 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 ODF3BA8MYP8 253 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 C21orf140B9A014 251 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 GSTZ1O43708 216 aaPredicted RBP2.7□□□□□ -1.98
SMG1-204ENST00000561940 SLC25A16P16260 332 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 ZNF7P17097 686 aaPredicted RBP2.7□□□□□ -1.98
SMG1-204ENST00000561940 MYL12AP19105 171 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 CRYBB3P26998 211 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 OR10J1P30954 320 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 LPAR6P43657 344 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 AP2S1P53680 142 aaPredicted RBP2.7□□□□□ -1.98
SMG1-204ENST00000561940 CXCR4P61073 352 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 C9orf64Q5T6V5 341 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 NAA40Q86UY6 237 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 WFDC11Q8NEX6 87 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 OR2D3Q8NGH3 330 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 TMA16Q96EY4 203 aaKnown RBP2.7□□□□□ -1.98
SMG1-204ENST00000561940 EMC3Q9P0I2 261 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 ANK1P16157 1881 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 MYH9P35579 1960 aaKnown RBP2.7□□□□□ -1.98
SMG1-204ENST00000561940 RP1P56715 2156 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 AKAP9Q99996 3911 aa2.7□□□□□ -1.98
SMG1-204ENST00000561940 TGP01266 2768 aa2.69□□□□□ -1.98
SMG1-204ENST00000561940 MGAM2Q2M2H8 2515 aa2.69□□□□□ -1.98
SMG1-204ENST00000561940 IGHV3-73A0A0B4J1V6 119 aa2.69□□□□□ -1.98
SMG1-204ENST00000561940 FAM92AA1XBS5 289 aa2.69□□□□□ -1.98
SMG1-204ENST00000561940 C19orf84I3L1E1 186 aa2.69□□□□□ -1.98
SMG1-204ENST00000561940 CXCR6O00574 342 aa2.69□□□□□ -1.98
SMG1-204ENST00000561940 E2F6O75461 281 aa2.69□□□□□ -1.98
SMG1-204ENST00000561940 IL3P08700 152 aa2.69□□□□□ -1.98
SMG1-204ENST00000561940 BLVRBP30043 206 aaPredicted RBP2.69□□□□□ -1.98
SMG1-204ENST00000561940 RWDD2BP57060 319 aa2.69□□□□□ -1.98
SMG1-204ENST00000561940 PPP1R1AQ13522 171 aa2.69□□□□□ -1.98
SMG1-204ENST00000561940 DEFB113Q30KQ7 82 aa2.69□□□□□ -1.98
SMG1-204ENST00000561940 LPCAT4Q643R3 524 aa2.69□□□□□ -1.98
SMG1-204ENST00000561940 Q6ZS92 163 aa2.69□□□□□ -1.98
SMG1-204ENST00000561940 GKN2Q86XP6 184 aa2.69□□□□□ -1.98
SMG1-204ENST00000561940 C1orf174Q8IYL3 243 aa2.69□□□□□ -1.98
SMG1-204ENST00000561940 FDCSPQ8NFU4 85 aa2.69□□□□□ -1.98
SMG1-204ENST00000561940 CPNE2Q96FN4 548 aaPredicted RBP2.69□□□□□ -1.98
SMG1-204ENST00000561940 MRPS26Q9BYN8 205 aaKnown RBP2.69□□□□□ -1.98
SMG1-204ENST00000561940 NKX6-2Q9C056 277 aaPredicted RBP2.69□□□□□ -1.98
SMG1-204ENST00000561940 PCYT1BQ9Y5K3 369 aaPredicted RBP2.69□□□□□ -1.98
SMG1-204ENST00000561940 DCHS2Q6V1P9 2916 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 A0A0J9YX75 114 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 GRIFINA4D1Z8 144 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 M0R381 172 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 ZNF189O75820 626 aaPredicted RBP2.68□□□□□ -1.98
SMG1-204ENST00000561940 MT-CO2P00403 227 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 SERPINB10P48595 397 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 RPS24P62847 133 aaKnown RBP2.68□□□□□ -1.98
SMG1-204ENST00000561940 HLA-DRB3P79483 266 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 BATFQ16520 125 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 RASSF6Q6ZTQ3 369 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 OR4K13Q8NH42 304 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 HAVCR2Q8TDQ0 301 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 TESCQ96BS2 214 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 ANKRD36BP1Q96IX9 119 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 OR52B2Q96RD2 323 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 STACQ99469 402 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 LRTM1Q9HBL6 345 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 FKBP14Q9NWM8 211 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 DKKL1Q9UK85 242 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 SNX12Q9UMY4 172 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 MYO7BQ6PIF6 2116 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 MYH7P12883 1935 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 MYH6P13533 1939 aa2.68□□□□□ -1.98
SMG1-204ENST00000561940 MAP1AP78559 2803 aaPredicted RBP2.67□□□□□ -1.98
SMG1-204ENST00000561940 CNTRLQ7Z7A1 2325 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 ACOX3O15254 700 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 ISG15P05161 165 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 CXCL8P10145 99 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 CD36P16671 472 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 NPPCP23582 126 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 RPL12P30050 165 aaKnown RBP2.67□□□□□ -1.98
SMG1-204ENST00000561940 GABRA4P48169 554 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 PSMD8P48556 350 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 TMEM33P57088 247 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 HOXC5Q00444 222 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms