RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 A0A1W2PRE2 83 aa15.33■□□□□ 0.04
RAB40C-206ENST00000561781 F8W1H4 67 aa15.33■□□□□ 0.04
RAB40C-206ENST00000561781 P04436 131 aa15.33■□□□□ 0.04
RAB40C-206ENST00000561781 WIPI1Q5MNZ9 446 aaPredicted RBP15.33■□□□□ 0.04
RAB40C-206ENST00000561781 OR9G4Q8NGQ1 327 aa15.33■□□□□ 0.04
RAB40C-206ENST00000561781 ATMQ13315 3056 aa15.32■□□□□ 0.04
RAB40C-206ENST00000561781 FGF6P10767 208 aa15.32■□□□□ 0.04
RAB40C-206ENST00000561781 B4GALT1P15291 398 aa15.32■□□□□ 0.04
RAB40C-206ENST00000561781 KRTAP27-1Q3LI81 207 aa15.32■□□□□ 0.04
RAB40C-206ENST00000561781 UBALD1Q8TB05 177 aa15.32■□□□□ 0.04
RAB40C-206ENST00000561781 VGLL1Q99990 258 aa15.32■□□□□ 0.04
RAB40C-206ENST00000561781 CHRNA10Q9GZZ6 450 aa15.32■□□□□ 0.04
RAB40C-206ENST00000561781 SIVA1O15304 175 aa15.32■□□□□ 0.04
RAB40C-206ENST00000561781 TMEM177Q53S58 311 aa15.32■□□□□ 0.04
RAB40C-206ENST00000561781 ATP5L2Q7Z4Y8 100 aa15.32■□□□□ 0.04
RAB40C-206ENST00000561781 DRAM1Q8N682 238 aa15.32■□□□□ 0.04
RAB40C-206ENST00000561781 OR4X2Q8NGF9 303 aa15.32■□□□□ 0.04
RAB40C-206ENST00000561781 NEU4Q8WWR8 484 aaPredicted RBP15.32■□□□□ 0.04
RAB40C-206ENST00000561781 GGTLC1Q9BX51 225 aa15.32■□□□□ 0.04
RAB40C-206ENST00000561781 SPENQ96T58 3664 aaKnown RBP15.31■□□□□ 0.04
RAB40C-206ENST00000561781 C15orf62A8K5M9 175 aa15.31■□□□□ 0.04
RAB40C-206ENST00000561781 IGLV2-8P01709 118 aa15.31■□□□□ 0.04
RAB40C-206ENST00000561781 MIC13Q5XKP0 118 aa15.31■□□□□ 0.04
RAB40C-206ENST00000561781 NFAM1Q8NET5 270 aaPredicted RBP15.31■□□□□ 0.04
RAB40C-206ENST00000561781 NUP35Q8NFH5 326 aa15.31■□□□□ 0.04
RAB40C-206ENST00000561781 SDK2Q58EX2 2172 aa15.31■□□□□ 0.04
RAB40C-206ENST00000561781 ACACAQ13085 2346 aa15.31■□□□□ 0.04
RAB40C-206ENST00000561781 C3orf80F5H4A9 247 aa15.31■□□□□ 0.04
RAB40C-206ENST00000561781 SCRG1O75711 98 aa15.31■□□□□ 0.04
RAB40C-206ENST00000561781 NEURL1O76050 574 aa15.31■□□□□ 0.04
RAB40C-206ENST00000561781 CA1P00915 261 aaPredicted RBP15.31■□□□□ 0.04
RAB40C-206ENST00000561781 CELA3AP09093 270 aa15.31■□□□□ 0.04
RAB40C-206ENST00000561781 TREML4Q6UXN2 200 aa15.31■□□□□ 0.04
RAB40C-206ENST00000561781 MOB1BQ7L9L4 216 aa15.31■□□□□ 0.04
RAB40C-206ENST00000561781 STPG3Q8N7X2 389 aa15.31■□□□□ 0.04
RAB40C-206ENST00000561781 SS18L2Q9UHA2 77 aa15.31■□□□□ 0.04
RAB40C-206ENST00000561781 PSG8Q9UQ74 426 aa15.31■□□□□ 0.04
RAB40C-206ENST00000561781 TPRP12270 2363 aaKnown RBP15.3■□□□□ 0.04
RAB40C-206ENST00000561781 TNRC6AQ8NDV7 1962 aaKnown RBP15.3■□□□□ 0.04
RAB40C-206ENST00000561781 TRAV24A0A0B4J272 114 aa15.3■□□□□ 0.04
RAB40C-206ENST00000561781 A1L4Q6 167 aa15.3■□□□□ 0.04
RAB40C-206ENST00000561781 NHLRC2Q8NBF2 726 aa15.3■□□□□ 0.04
RAB40C-206ENST00000561781 MGST2Q99735 147 aa15.3■□□□□ 0.04
RAB40C-206ENST00000561781 ZNF816Q0VGE8 651 aaPredicted RBP15.29■□□□□ 0.04
RAB40C-206ENST00000561781 EFNB3Q15768 340 aa15.29■□□□□ 0.04
RAB40C-206ENST00000561781 TEX45Q8NA69 505 aa15.29■□□□□ 0.04
RAB40C-206ENST00000561781 OR10D3Q8NH80 312 aa15.29■□□□□ 0.04
RAB40C-206ENST00000561781 FGFBP3Q8TAT2 258 aa15.29■□□□□ 0.04
RAB40C-206ENST00000561781 ZNF488Q96MN9 340 aa15.29■□□□□ 0.04
RAB40C-206ENST00000561781 SPAG8Q99932 426 aaPredicted RBP15.29■□□□□ 0.04
RAB40C-206ENST00000561781 FAM110AQ9BQ89 295 aa15.29■□□□□ 0.04
RAB40C-206ENST00000561781 TMEM167BQ9NRX6 74 aa15.29■□□□□ 0.04
RAB40C-206ENST00000561781 SIGLEC8Q9NYZ4 499 aa15.29■□□□□ 0.04
RAB40C-206ENST00000561781 ANKRD11Q6UB99 2663 aaPredicted RBP15.29■□□□□ 0.04
RAB40C-206ENST00000561781 SYNGR1O43759 233 aa15.29■□□□□ 0.04
RAB40C-206ENST00000561781 SMIM13P0DJ93 91 aa15.29■□□□□ 0.04
RAB40C-206ENST00000561781 ADTRPQ96IZ2 230 aa15.29■□□□□ 0.04
RAB40C-206ENST00000561781 A0A1B0GX78 115 aa15.28■□□□□ 0.04
RAB40C-206ENST00000561781 SRSF6Q13247 344 aaKnown RBP15.28■□□□□ 0.04
RAB40C-206ENST00000561781 MKXQ8IYA7 352 aa15.28■□□□□ 0.04
RAB40C-206ENST00000561781 BOD1L2Q8IYS8 172 aa15.28■□□□□ 0.04
RAB40C-206ENST00000561781 GCSAMQ8N6F7 178 aa15.28■□□□□ 0.04
RAB40C-206ENST00000561781 IGF2BP2-AS1Q96M15 143 aa15.28■□□□□ 0.04
RAB40C-206ENST00000561781 VWC2LB2RUY7 222 aa15.28■□□□□ 0.04
RAB40C-206ENST00000561781 H0Y8G0 127 aa15.28■□□□□ 0.04
RAB40C-206ENST00000561781 KLF7O75840 302 aaPredicted RBP15.28■□□□□ 0.04
RAB40C-206ENST00000561781 IGHV3-7P01780 117 aa15.28■□□□□ 0.04
RAB40C-206ENST00000561781 FAM87AP0C7U9 286 aa15.28■□□□□ 0.04
RAB40C-206ENST00000561781 COL8A2P25067 703 aa15.28■□□□□ 0.04
RAB40C-206ENST00000561781 CAMPP49913 170 aa15.28■□□□□ 0.04
RAB40C-206ENST00000561781 FAM231DQ6ZW35 169 aa15.28■□□□□ 0.04
RAB40C-206ENST00000561781 ANKRD37Q7Z713 158 aa15.28■□□□□ 0.04
RAB40C-206ENST00000561781 FAM168AQ92567 244 aa15.28■□□□□ 0.04
RAB40C-206ENST00000561781 GPR82Q96P67 336 aa15.28■□□□□ 0.04
RAB40C-206ENST00000561781 SSBP3Q9BWW4 388 aaPredicted RBP15.28■□□□□ 0.04
RAB40C-206ENST00000561781 OR2H1Q9GZK4 316 aa15.28■□□□□ 0.04
RAB40C-206ENST00000561781 GUSBP1Q15486 140 aa15.27■□□□□ 0.04
RAB40C-206ENST00000561781 INO80CQ6PI98 192 aaPredicted RBP15.27■□□□□ 0.04
RAB40C-206ENST00000561781 OR52E5Q8NH55 327 aa15.27■□□□□ 0.04
RAB40C-206ENST00000561781 DUSP13Q9UII6 198 aa15.27■□□□□ 0.04
RAB40C-206ENST00000561781 ERG28Q9UKR5 140 aa15.27■□□□□ 0.04
RAB40C-206ENST00000561781 FBLL1A6NHQ2 334 aaKnown RBP15.27■□□□□ 0.03
RAB40C-206ENST00000561781 FOXH1O75593 365 aa15.27■□□□□ 0.03
RAB40C-206ENST00000561781 FKBP2P26885 142 aaKnown RBP15.27■□□□□ 0.03
RAB40C-206ENST00000561781 SPATA31B1PQ5VZV4 182 aa15.27■□□□□ 0.03
RAB40C-206ENST00000561781 LINC00596Q86U02 117 aa15.27■□□□□ 0.03
RAB40C-206ENST00000561781 MCRIP2Q9BUT9 160 aaKnown RBP15.27■□□□□ 0.03
RAB40C-206ENST00000561781 IDI2-AS1Q9NZ38 188 aa15.27■□□□□ 0.03
RAB40C-206ENST00000561781 KBTBD11-OT1A0A1B0GTJ5 212 aa15.26■□□□□ 0.03
RAB40C-206ENST00000561781 ZNHIT1O43257 154 aa15.26■□□□□ 0.03
RAB40C-206ENST00000561781 ZIC3O60481 467 aa15.26■□□□□ 0.03
RAB40C-206ENST00000561781 FADS6Q8N9I5 356 aa15.26■□□□□ 0.03
RAB40C-206ENST00000561781 NANOS1Q8WY41 292 aaKnown RBP15.26■□□□□ 0.03
RAB40C-206ENST00000561781 SLC25A10Q9UBX3 287 aaPredicted RBP15.26■□□□□ 0.03
RAB40C-206ENST00000561781 ESPL1Q14674 2120 aa15.26■□□□□ 0.03
RAB40C-206ENST00000561781 NTF4P34130 210 aa15.26■□□□□ 0.03
RAB40C-206ENST00000561781 TTC9CQ8N5M4 171 aa15.26■□□□□ 0.03
RAB40C-206ENST00000561781 C19orf24Q9BVV8 132 aa15.26■□□□□ 0.03
RAB40C-206ENST00000561781 CYSLTR1Q9Y271 337 aa15.26■□□□□ 0.03
RAB40C-206ENST00000561781 SMG1Q96Q15 3661 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms