RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 LPCAT4Q643R3 524 aa0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 DPPA3Q6W0C5 159 aa0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 OR10J5Q8NHC4 309 aa0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 KLK6Q92876 244 aa0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 ITFG2Q969R8 447 aa0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 IMP4Q96G21 291 aaKnown RBP0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 ULBP3Q9BZM4 244 aa0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 NHP2Q9NX24 153 aaKnown RBP0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 PLXND1Q9Y4D7 1925 aa0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 FRAS1Q86XX4 4008 aa0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 USP24Q9UPU5 2620 aa0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 MTUS2Q5JR59 1369 aa0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 BUB1B-PAK6H3BSN5 160 aa0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 SNRNP200O75643 2136 aaKnown RBP0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 CD79AP11912 226 aa0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 SSR2P43308 183 aa0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 CDC42P60953 191 aa0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 CNBPP62633 177 aaKnown RBP0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 TPM4P67936 248 aa0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 ACOT6Q3I5F7 207 aaPredicted RBP0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 C1orf137Q5JT78 98 aa0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 HIST3H2BBQ8N257 126 aa0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 Q8N6K4 173 aa0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 OR5A1Q8NGJ0 315 aa0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 SFT2D1Q8WV19 159 aa0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 C4orf3Q8WVX3 66 aa0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 AMELYQ99218 206 aa0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 TMEM70Q9BUB7 260 aa0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 MRPS26Q9BYN8 205 aaKnown RBP0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 DCSTAMPQ9H295 470 aa0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 RNF122Q9H9V4 155 aa0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 MRPL27Q9P0M9 148 aaKnown RBP0.33□□□□□ -2.36
HMBOX1-216ENST00000561377 WRNQ14191 1432 aaPredicted RBP eCLIP0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 TRAV9-1A0A075B6T8 112 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 EXOC1LA0A1B0GW35 172 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 PQLC2LA1A4F0 135 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 CLDN25C9JDP6 229 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 FAAHO00519 579 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 OR2J2O76002 312 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 SMIM10L2AP0DMW4 78 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 SMIM10L2BP0DMW5 78 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 SULT1A1P50225 295 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 NKX2-5P52952 324 aaPredicted RBP0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 SPCS3P61009 180 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 SRSF6Q13247 344 aaKnown RBP0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 KHDC3LQ587J8 217 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 SOSTDC1Q6X4U4 206 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 CLVS1Q8IUQ0 354 aaPredicted RBP0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 SBSPONQ8IVN8 264 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 GINS4Q9BRT9 223 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 SLC39A9Q9NUM3 307 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 CMTM6Q9NX76 183 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 RASL12Q9NYN1 266 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 ERGIC3Q9Y282 383 aa0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 COL1A1P02452 1464 aaPredicted RBP0.32□□□□□ -2.36
HMBOX1-216ENST00000561377 TAF1LQ8IZX4 1826 aa0.31□□□□□ -2.36
HMBOX1-216ENST00000561377 TRAV1-1A0A0B4J248 108 aa0.31□□□□□ -2.36
HMBOX1-216ENST00000561377 M0R036 132 aa0.31□□□□□ -2.36
HMBOX1-216ENST00000561377 IFNA5P01569 189 aa0.31□□□□□ -2.36
HMBOX1-216ENST00000561377 SERPINA6P08185 405 aa0.31□□□□□ -2.36
HMBOX1-216ENST00000561377 RPL5P46777 297 aaKnown RBP0.31□□□□□ -2.36
HMBOX1-216ENST00000561377 KCNJ8Q15842 424 aa0.31□□□□□ -2.36
HMBOX1-216ENST00000561377 CDKL4Q5MAI5 379 aa0.31□□□□□ -2.36
HMBOX1-216ENST00000561377 HIST2H3PS2Q5TEC6 136 aa0.31□□□□□ -2.36
HMBOX1-216ENST00000561377 OOSP2Q86WS3 158 aa0.31□□□□□ -2.36
HMBOX1-216ENST00000561377 BPIFA4PQ86YQ2 179 aa0.31□□□□□ -2.36
HMBOX1-216ENST00000561377 C3orf56Q8N813 242 aa0.31□□□□□ -2.36
HMBOX1-216ENST00000561377 OR51D1Q8NGF3 324 aa0.31□□□□□ -2.36
HMBOX1-216ENST00000561377 C11orf68Q9H3H3 251 aaKnown RBP0.31□□□□□ -2.36
HMBOX1-216ENST00000561377 GUCA1BQ9UMX6 200 aa0.31□□□□□ -2.36
HMBOX1-216ENST00000561377 DOCK3Q8IZD9 2030 aa0.31□□□□□ -2.36
HMBOX1-216ENST00000561377 MED12Q93074 2177 aa0.3□□□□□ -2.36
HMBOX1-216ENST00000561377 TRBV6-8A0A0A6YYG3 113 aa0.3□□□□□ -2.36
HMBOX1-216ENST00000561377 C7orf71A4D174 169 aa0.3□□□□□ -2.36
HMBOX1-216ENST00000561377 PROSCO94903 275 aa0.3□□□□□ -2.36
HMBOX1-216ENST00000561377 TTRP02766 147 aa0.3□□□□□ -2.36
HMBOX1-216ENST00000561377 COTL1Q14019 142 aa0.3□□□□□ -2.36
HMBOX1-216ENST00000561377 IMPG1Q17R60 797 aa0.3□□□□□ -2.36
HMBOX1-216ENST00000561377 MPV17LQ2QL34 196 aa0.3□□□□□ -2.36
HMBOX1-216ENST00000561377 CCDC122Q5T0U0 273 aa0.3□□□□□ -2.36
HMBOX1-216ENST00000561377 C12orf45Q8N5I9 185 aaPredicted RBP0.3□□□□□ -2.36
HMBOX1-216ENST00000561377 OR13D1Q8NGV5 346 aa0.3□□□□□ -2.36
HMBOX1-216ENST00000561377 TMEM147Q9BVK8 224 aa0.3□□□□□ -2.36
HMBOX1-216ENST00000561377 EPDR1Q9UM22 224 aa0.3□□□□□ -2.36
HMBOX1-216ENST00000561377 PLXNA4Q9HCM2 1894 aa0.3□□□□□ -2.36
HMBOX1-216ENST00000561377 KMT2DO14686 5537 aa0.3□□□□□ -2.36
HMBOX1-216ENST00000561377 E9PCH4 1651 aa0.3□□□□□ -2.36
HMBOX1-216ENST00000561377 ASCC3Q8N3C0 2202 aaKnown RBP0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 MED1Q15648 1581 aaPredicted RBP0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 CASP8AP2Q9UKL3 1982 aa0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 TRAV26-2A0A0B4J265 109 aa0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 A0A1W2PPM0 123 aa0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 CHP2O43745 196 aa0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 AHSA1O95433 338 aa0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 IFNA16P05015 189 aa0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 YPEL3P61236 119 aaPredicted RBP0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 LINC01554Q52M75 96 aa0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 TRAPPC6BQ86SZ2 158 aa0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 OR6V1Q8N148 313 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms