RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 LRRC20Q8TCA0 184 aa8.85□□□□□ -0.99
SNX1-212ENST00000560861 RNF141Q8WVD5 230 aa8.85□□□□□ -0.99
SNX1-212ENST00000560861 SAT2Q96F10 170 aaPredicted RBP8.85□□□□□ -0.99
SNX1-212ENST00000560861 MISP3Q96FF7 219 aa8.85□□□□□ -0.99
SNX1-212ENST00000560861 SLC35E1Q96K37 410 aa8.85□□□□□ -0.99
SNX1-212ENST00000560861 CXorf58Q96LI9 332 aa8.85□□□□□ -0.99
SNX1-212ENST00000560861 SLC45A2Q9UMX9 530 aa8.85□□□□□ -0.99
SNX1-212ENST00000560861 TRBV9A0A0B4J1U6 114 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 SMCO3A2RU48 225 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 TRIM77I1YAP6 450 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 TSPAN9O75954 239 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 YIF1AO95070 293 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 PRH1P02810 166 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 LINC00869P0C866 280 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 SRP14P37108 136 aaKnown RBP8.84□□□□□ -0.99
SNX1-212ENST00000560861 OPRK1P41145 380 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 RIPPLY3P57055 190 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 PRR20EP86478 221 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 PRR20CP86479 221 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 PRR20DP86480 221 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 PRR20BP86481 221 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 PRR20AP86496 221 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 CFHR3Q02985 330 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 AKR1C1Q04828 323 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 ETFRF1Q6IPR1 90 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 SLC25A24Q6NUK1 477 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 TEPPQ6URK8 271 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 LYPD6BQ8NI32 183 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 VSIRQ9H7M9 311 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 MED9Q9NWA0 146 aa8.84□□□□□ -0.99
SNX1-212ENST00000560861 FN1P02751 2386 aaKnown RBP8.84□□□□□ -0.99
SNX1-212ENST00000560861 TRAV41A0A0B4J266 112 aa8.83□□□□□ -1
SNX1-212ENST00000560861 BTBD17A6NE02 478 aa8.83□□□□□ -1
SNX1-212ENST00000560861 F8W735 103 aaPredicted RBP8.83□□□□□ -1
SNX1-212ENST00000560861 AGPAT2O15120 278 aa8.83□□□□□ -1
SNX1-212ENST00000560861 NDUFB8O95169 186 aa8.83□□□□□ -1
SNX1-212ENST00000560861 IGHV3-48P01763 117 aa8.83□□□□□ -1
SNX1-212ENST00000560861 HIST1H1BP16401 226 aaKnown RBP8.83□□□□□ -1
SNX1-212ENST00000560861 PPIFP30405 207 aaKnown RBP8.83□□□□□ -1
SNX1-212ENST00000560861 RPL29P47914 159 aaKnown RBP8.83□□□□□ -1
SNX1-212ENST00000560861 CAMLGP49069 296 aa8.83□□□□□ -1
SNX1-212ENST00000560861 FHITP49789 147 aa8.83□□□□□ -1
SNX1-212ENST00000560861 RND2P52198 227 aa8.83□□□□□ -1
SNX1-212ENST00000560861 RAB2AP61019 212 aa8.83□□□□□ -1
SNX1-212ENST00000560861 RAB14P61106 215 aa8.83□□□□□ -1
SNX1-212ENST00000560861 ZNF726P1Q15940 193 aa8.83□□□□□ -1
SNX1-212ENST00000560861 NDUFA5Q16718 116 aa8.83□□□□□ -1
SNX1-212ENST00000560861 ECSCRQ19T08 205 aa8.83□□□□□ -1
SNX1-212ENST00000560861 DPPA3Q6W0C5 159 aa8.83□□□□□ -1
SNX1-212ENST00000560861 SLC35E3Q7Z769 313 aa8.83□□□□□ -1
SNX1-212ENST00000560861 Q8N2B8 174 aa8.83□□□□□ -1
SNX1-212ENST00000560861 OR5T1Q8NG75 326 aa8.83□□□□□ -1
SNX1-212ENST00000560861 OR4X1Q8NH49 305 aa8.83□□□□□ -1
SNX1-212ENST00000560861 NPIPB3Q92617 1050 aa8.83□□□□□ -1
SNX1-212ENST00000560861 ZNF702PQ9H963 129 aa8.83□□□□□ -1
SNX1-212ENST00000560861 RPRMQ9NS64 109 aa8.83□□□□□ -1
SNX1-212ENST00000560861 SETD2Q9BYW2 2564 aaPredicted RBP8.83□□□□□ -1
SNX1-212ENST00000560861 ZNF705EA8MWA4 302 aaPredicted RBP8.82□□□□□ -1
SNX1-212ENST00000560861 C17orf112F2Z3M2 114 aa8.82□□□□□ -1
SNX1-212ENST00000560861 IGLC1P0CG04 106 aa8.82□□□□□ -1
SNX1-212ENST00000560861 HNF1AP20823 631 aa8.82□□□□□ -1
SNX1-212ENST00000560861 OR10J1P30954 320 aa8.82□□□□□ -1
SNX1-212ENST00000560861 FCGR2BP31994 310 aaPredicted RBP8.82□□□□□ -1
SNX1-212ENST00000560861 BLOC1S1P78537 153 aa8.82□□□□□ -1
SNX1-212ENST00000560861 TMEM41BQ5BJD5 291 aa8.82□□□□□ -1
SNX1-212ENST00000560861 FFAR4Q5NUL3 377 aa8.82□□□□□ -1
SNX1-212ENST00000560861 AKR1C8PQ5T2L2 129 aa8.82□□□□□ -1
SNX1-212ENST00000560861 PXDC1Q5TGL8 231 aa8.82□□□□□ -1
SNX1-212ENST00000560861 MIC13Q5XKP0 118 aa8.82□□□□□ -1
SNX1-212ENST00000560861 Q6ZRG5 221 aa8.82□□□□□ -1
SNX1-212ENST00000560861 ACY3Q96HD9 319 aa8.82□□□□□ -1
SNX1-212ENST00000560861 ZNF414Q96IQ9 312 aa8.82□□□□□ -1
SNX1-212ENST00000560861 TRGV9Q99603 122 aa8.82□□□□□ -1
SNX1-212ENST00000560861 PXMP4Q9Y6I8 212 aa8.82□□□□□ -1
SNX1-212ENST00000560861 IGHV3-21A0A0B4J1V1 117 aa8.81□□□□□ -1
SNX1-212ENST00000560861 TCRBV4S1A1TA0A5B7 111 aa8.81□□□□□ -1
SNX1-212ENST00000560861 PSMB11A5LHX3 300 aa8.81□□□□□ -1
SNX1-212ENST00000560861 MFSD2BA6NFX1 497 aa8.81□□□□□ -1
SNX1-212ENST00000560861 DNAJC9-AS1A6NH13 148 aa8.81□□□□□ -1
SNX1-212ENST00000560861 SEC14L6B5MCN3 397 aa8.81□□□□□ -1
SNX1-212ENST00000560861 H3BUA1 57 aa8.81□□□□□ -1
SNX1-212ENST00000560861 CLDN34H7C241 214 aa8.81□□□□□ -1
SNX1-212ENST00000560861 AP4M1O00189 453 aa8.81□□□□□ -1
SNX1-212ENST00000560861 CLN5O75503 358 aa8.81□□□□□ -1
SNX1-212ENST00000560861 IGLV1-40P01703 118 aa8.81□□□□□ -1
SNX1-212ENST00000560861 DEFA4P12838 97 aa8.81□□□□□ -1
SNX1-212ENST00000560861 CD99P14209 185 aa8.81□□□□□ -1
SNX1-212ENST00000560861 ELLP55199 621 aaPredicted RBP8.81□□□□□ -1
SNX1-212ENST00000560861 C9orf152Q5JTZ5 239 aa8.81□□□□□ -1
SNX1-212ENST00000560861 SPSB3Q6PJ21 355 aa8.81□□□□□ -1
SNX1-212ENST00000560861 CYP2G1PQ6ZSU1 146 aa8.81□□□□□ -1
SNX1-212ENST00000560861 SSX7Q7RTT5 188 aa8.81□□□□□ -1
SNX1-212ENST00000560861 SLC7A5P1Q8MH63 180 aa8.81□□□□□ -1
SNX1-212ENST00000560861 RPP25LQ8N5L8 163 aaKnown RBP8.81□□□□□ -1
SNX1-212ENST00000560861 STPG3Q8N7X2 389 aa8.81□□□□□ -1
SNX1-212ENST00000560861 ZNF709Q8N972 641 aa8.81□□□□□ -1
SNX1-212ENST00000560861 VN1R17PQ8TDU5 208 aa8.81□□□□□ -1
SNX1-212ENST00000560861 MBD3L1Q8WWY6 194 aa8.81□□□□□ -1
SNX1-212ENST00000560861 NOL4LQ96MY1 436 aaPredicted RBP8.81□□□□□ -1
SNX1-212ENST00000560861 ESM1Q9NQ30 184 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms