RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 GALNT14Q96FL9 552 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 CCDC140Q96MF4 163 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 WDR12Q9GZL7 423 aaKnown RBP6.12□□□□□ -1.43
LRRC28-219ENST00000560483 PALMDQ9NP74 551 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 GAR1Q9NY12 217 aaKnown RBP6.12□□□□□ -1.43
LRRC28-219ENST00000560483 PTTG2Q9NZH5 202 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 SHPKQ9UHJ6 478 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 FLVCR2Q9UPI3 526 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 TMEM56-RWDD3S4R434 201 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 IGHV3OR16-8A0A075B7F1 116 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 FAM25EA8MYX2 175 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 CORTO00230 105 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 NDUFB6O95139 128 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 SCGB1D2O95969 90 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 IFNA21P01568 189 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 GP9P14770 177 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 ANXA7P20073 488 aaKnown RBP6.11□□□□□ -1.43
LRRC28-219ENST00000560483 HTR2BP41595 481 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 NPBWR1P48145 328 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 SUPT4H1P63272 117 aaKnown RBP6.11□□□□□ -1.43
LRRC28-219ENST00000560483 CD69Q07108 199 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 EGFEM1PQ0D2K5 195 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 LCN12Q6JVE5 192 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 Q6ZRM9 215 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 GTSCR1Q86UQ5 136 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 ZNF502Q8TBZ5 544 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 ENKURQ8TC29 256 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 BSCL2Q96G97 398 aaPredicted RBP6.11□□□□□ -1.43
LRRC28-219ENST00000560483 CCDC32Q9BV29 185 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 C20orf85Q9H1P6 137 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 CACFD1Q9UGQ2 172 aa6.11□□□□□ -1.43
LRRC28-219ENST00000560483 DUXBA0A1W2PPF3 345 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 RPS10-NUDT3A0A1W2PQS6 291 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 K7EIL1 84 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 ZNF207O43670 478 aaKnown RBP6.1□□□□□ -1.43
LRRC28-219ENST00000560483 IFNA4P05014 189 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 OR4E1P0C645 316 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 IAPPP10997 89 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 FOLR2P14207 255 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 MFAP2P55001 183 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 RELQ04864 619 aaPredicted RBP6.1□□□□□ -1.43
LRRC28-219ENST00000560483 ANKRD55Q3KP44 614 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 SPSB3Q6PJ21 355 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 RBPMS2Q6ZRY4 209 aaKnown RBP6.1□□□□□ -1.43
LRRC28-219ENST00000560483 NOXA1Q86UR1 476 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 SLC24A4Q8NFF2 622 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 OR52E5Q8NH55 327 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 DTD1Q8TEA8 209 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 CACNG8Q8WXS5 425 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 SDHCQ99643 169 aaPredicted RBP6.1□□□□□ -1.43
LRRC28-219ENST00000560483 RBKSQ9H477 322 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 UFC1Q9Y3C8 167 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 TMED3Q9Y3Q3 217 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 DMRT1Q9Y5R6 373 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 MEGF8Q7Z7M0 2845 aa6.1□□□□□ -1.43
LRRC28-219ENST00000560483 A0A1B0GU03 582 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 C9orf170A2RU37 121 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 C2orf70A6NJV1 201 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 K7EIM0 57 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 MED6O75586 246 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 CSN3P07498 182 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 P0C879 139 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 RNASE2P10153 161 aaKnown RBP6.09□□□□□ -1.43
LRRC28-219ENST00000560483 ATF4P18848 351 aaPredicted RBP6.09□□□□□ -1.43
LRRC28-219ENST00000560483 NPY1RP25929 384 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 UBE2MP61081 183 aaKnown RBP6.09□□□□□ -1.43
LRRC28-219ENST00000560483 RAB11AP62491 216 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 RPP30P78346 268 aaKnown RBP6.09□□□□□ -1.43
LRRC28-219ENST00000560483 TNFRSF9Q07011 255 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 DHRS2Q13268 280 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 TM4SF20Q53R12 229 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 GGNBP1Q5YKI7 109 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 ETFRF1Q6IPR1 90 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 LYG2Q86SG7 212 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 GPHB5Q86YW7 130 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 ZNF114Q8NC26 417 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 MAGT1Q9H0U3 335 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 TUBA4BQ9H853 241 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 NUDT15Q9NV35 164 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 GSKIPQ9P0R6 139 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 SMAD5-AS1Q9Y6J3 95 aa6.09□□□□□ -1.43
LRRC28-219ENST00000560483 IGHV3-49A0A0A0MS15 119 aa6.08□□□□□ -1.44
LRRC28-219ENST00000560483 C5orf51A6NDU8 294 aa6.08□□□□□ -1.44
LRRC28-219ENST00000560483 I3L2K1 104 aa6.08□□□□□ -1.44
LRRC28-219ENST00000560483 NDUFA4O00483 81 aa6.08□□□□□ -1.44
LRRC28-219ENST00000560483 ADAP1O75689 374 aa6.08□□□□□ -1.44
LRRC28-219ENST00000560483 SCAF4O95104 1147 aaKnown RBP6.08□□□□□ -1.44
LRRC28-219ENST00000560483 IGLV1-51P01701 117 aa6.08□□□□□ -1.44
LRRC28-219ENST00000560483 TCRBP04435 133 aa6.08□□□□□ -1.44
LRRC28-219ENST00000560483 EDN2P20800 178 aa6.08□□□□□ -1.44
LRRC28-219ENST00000560483 CBLN1P23435 193 aa6.08□□□□□ -1.44
LRRC28-219ENST00000560483 DEFA1P59665 94 aa6.08□□□□□ -1.44
LRRC28-219ENST00000560483 DEFA3P59666 94 aa6.08□□□□□ -1.44
LRRC28-219ENST00000560483 CD81P60033 236 aa6.08□□□□□ -1.44
LRRC28-219ENST00000560483 RPL11P62913 178 aaKnown RBP6.08□□□□□ -1.44
LRRC28-219ENST00000560483 CD300EQ496F6 205 aaPredicted RBP6.08□□□□□ -1.44
LRRC28-219ENST00000560483 NMSQ5H8A3 153 aa6.08□□□□□ -1.44
LRRC28-219ENST00000560483 LAMTOR1Q6IAA8 161 aa6.08□□□□□ -1.44
LRRC28-219ENST00000560483 BTNL8Q6UX41 500 aa6.08□□□□□ -1.44
LRRC28-219ENST00000560483 UNQ9165/PRO28630Q6UXU0 137 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms