RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 FAM209BQ5JX69 171 aa11.25□□□□□ -0.61
TRAF3-208ENST00000560371 NMBP08949 121 aa11.25□□□□□ -0.61
TRAF3-208ENST00000560371 PLXNB3Q9ULL4 1909 aa11.24□□□□□ -0.61
TRAF3-208ENST00000560371 TRAV24A0A0B4J272 114 aa11.24□□□□□ -0.61
TRAF3-208ENST00000560371 HLA-DRB1P01911 266 aa11.24□□□□□ -0.61
TRAF3-208ENST00000560371 TRGC2P03986 189 aa11.24□□□□□ -0.61
TRAF3-208ENST00000560371 C2orf88Q9BSF0 95 aa11.24□□□□□ -0.61
TRAF3-208ENST00000560371 TECTAO75443 2155 aa11.24□□□□□ -0.61
TRAF3-208ENST00000560371 CGAP01215 116 aa11.24□□□□□ -0.61
TRAF3-208ENST00000560371 TMEM167AQ8TBQ9 72 aa11.24□□□□□ -0.61
TRAF3-208ENST00000560371 CEP192Q8TEP8 1941 aa11.24□□□□□ -0.61
TRAF3-208ENST00000560371 RNASE4P34096 147 aaKnown RBP11.24□□□□□ -0.61
TRAF3-208ENST00000560371 NSUN5P1Q3KNT7 163 aa11.24□□□□□ -0.61
TRAF3-208ENST00000560371 OR4D5Q8NGN0 318 aa11.24□□□□□ -0.61
TRAF3-208ENST00000560371 ZNF324BQ6AW86 544 aaPredicted RBP11.24□□□□□ -0.61
TRAF3-208ENST00000560371 SDF2L1Q9HCN8 221 aa11.24□□□□□ -0.61
TRAF3-208ENST00000560371 FHITP49789 147 aa11.24□□□□□ -0.61
TRAF3-208ENST00000560371 KIAA1644Q3SXP7 199 aa11.24□□□□□ -0.61
TRAF3-208ENST00000560371 SIGLEC5O15389 551 aa11.23□□□□□ -0.61
TRAF3-208ENST00000560371 ZNF385CQ66K41 422 aaPredicted RBP11.23□□□□□ -0.61
TRAF3-208ENST00000560371 PLPPR1Q8TBJ4 325 aa11.23□□□□□ -0.61
TRAF3-208ENST00000560371 IGKV3D-20A0A0C4DH25 116 aa11.23□□□□□ -0.61
TRAF3-208ENST00000560371 MALP21145 153 aa11.23□□□□□ -0.61
TRAF3-208ENST00000560371 FAM166AQ6J272 317 aa11.23□□□□□ -0.61
TRAF3-208ENST00000560371 IFT22Q9H7X7 185 aa11.23□□□□□ -0.61
TRAF3-208ENST00000560371 B4DSR2 109 aa11.23□□□□□ -0.61
TRAF3-208ENST00000560371 TIMM23O14925 209 aa11.23□□□□□ -0.61
TRAF3-208ENST00000560371 SRIP30626 198 aa11.23□□□□□ -0.61
TRAF3-208ENST00000560371 ST6GALNAC3Q8NDV1 305 aa11.23□□□□□ -0.61
TRAF3-208ENST00000560371 RCC1LQ96I51 464 aaKnown RBP11.23□□□□□ -0.61
TRAF3-208ENST00000560371 NEUROG3Q9Y4Z2 214 aa11.23□□□□□ -0.61
TRAF3-208ENST00000560371 TRAV14DV4A0A0A6YYC5 116 aa11.23□□□□□ -0.61
TRAF3-208ENST00000560371 TDGF1P13385 188 aa11.23□□□□□ -0.61
TRAF3-208ENST00000560371 EGR1P18146 543 aa11.23□□□□□ -0.61
TRAF3-208ENST00000560371 TRBV6-7A0A0A0MS04 114 aa11.23□□□□□ -0.61
TRAF3-208ENST00000560371 ZNF383Q8NA42 475 aa11.23□□□□□ -0.61
TRAF3-208ENST00000560371 C11orf68Q9H3H3 251 aaKnown RBP11.23□□□□□ -0.61
TRAF3-208ENST00000560371 ANKHD1Q8IWZ3 2542 aaKnown RBP11.22□□□□□ -0.61
TRAF3-208ENST00000560371 DOPEY1Q5JWR5 2465 aa11.22□□□□□ -0.61
TRAF3-208ENST00000560371 LEMD1Q68G75 181 aa11.22□□□□□ -0.61
TRAF3-208ENST00000560371 TNFRSF14Q92956 283 aa11.22□□□□□ -0.61
TRAF3-208ENST00000560371 HIVEP2P31629 2446 aa11.22□□□□□ -0.61
TRAF3-208ENST00000560371 HBBP68871 147 aa11.22□□□□□ -0.61
TRAF3-208ENST00000560371 IGFBP3P17936 291 aaPredicted RBP11.22□□□□□ -0.61
TRAF3-208ENST00000560371 PLP1P60201 277 aa11.22□□□□□ -0.61
TRAF3-208ENST00000560371 UBE2DNLQ8IWF7 75 aa11.22□□□□□ -0.61
TRAF3-208ENST00000560371 SRSF6Q13247 344 aaKnown RBP11.22□□□□□ -0.61
TRAF3-208ENST00000560371 CYB5R2Q6BCY4 276 aa11.22□□□□□ -0.61
TRAF3-208ENST00000560371 FGFBP3Q8TAT2 258 aa11.22□□□□□ -0.61
TRAF3-208ENST00000560371 GLMPQ8WWB7 406 aa11.22□□□□□ -0.61
TRAF3-208ENST00000560371 PCDH15Q96QU1 1955 aa11.22□□□□□ -0.61
TRAF3-208ENST00000560371 C7orf71A4D174 169 aa11.22□□□□□ -0.61
TRAF3-208ENST00000560371 TMEM250H0YL14 139 aa11.22□□□□□ -0.61
TRAF3-208ENST00000560371 PEX7O00628 323 aa11.22□□□□□ -0.61
TRAF3-208ENST00000560371 CDK2AP2O75956 126 aa11.22□□□□□ -0.61
TRAF3-208ENST00000560371 UPK2O00526 184 aa11.22□□□□□ -0.61
TRAF3-208ENST00000560371 OTX1P32242 354 aaPredicted RBP11.22□□□□□ -0.61
TRAF3-208ENST00000560371 ZP1P60852 638 aa11.22□□□□□ -0.61
TRAF3-208ENST00000560371 TCF21O43680 179 aa11.21□□□□□ -0.61
TRAF3-208ENST00000560371 RAMP3O60896 148 aa11.21□□□□□ -0.61
TRAF3-208ENST00000560371 LINC00271P0C7V0 271 aa11.21□□□□□ -0.61
TRAF3-208ENST00000560371 Q6ZS92 163 aa11.21□□□□□ -0.61
TRAF3-208ENST00000560371 ERASQ7Z444 233 aa11.21□□□□□ -0.61
TRAF3-208ENST00000560371 GGCTO75223 188 aaKnown RBP11.21□□□□□ -0.61
TRAF3-208ENST00000560371 FOLR2P14207 255 aa11.21□□□□□ -0.61
TRAF3-208ENST00000560371 PAX1P15863 534 aa11.21□□□□□ -0.61
TRAF3-208ENST00000560371 VGLL1Q99990 258 aa11.21□□□□□ -0.61
TRAF3-208ENST00000560371 ARHGAP21Q5T5U3 1957 aa11.21□□□□□ -0.61
TRAF3-208ENST00000560371 TMEM8BA6NDV4 472 aa11.21□□□□□ -0.61
TRAF3-208ENST00000560371 TFF1P04155 84 aa11.21□□□□□ -0.61
TRAF3-208ENST00000560371 TFF3Q07654 80 aa11.21□□□□□ -0.61
TRAF3-208ENST00000560371 C15orf61A6NNL5 157 aa11.21□□□□□ -0.62
TRAF3-208ENST00000560371 PMCHL1Q16048 86 aa11.21□□□□□ -0.62
TRAF3-208ENST00000560371 TMEM95Q3KNT9 176 aa11.21□□□□□ -0.62
TRAF3-208ENST00000560371 LAIR2Q6ISS4 152 aa11.21□□□□□ -0.62
TRAF3-208ENST00000560371 LYZL4Q96KX0 146 aa11.21□□□□□ -0.62
TRAF3-208ENST00000560371 TRBV9A0A0B4J1U6 114 aa11.21□□□□□ -0.62
TRAF3-208ENST00000560371 TMEM144Q7Z5S9 345 aa11.21□□□□□ -0.62
TRAF3-208ENST00000560371 TMEM183AQ8IXX5 376 aa11.21□□□□□ -0.62
TRAF3-208ENST00000560371 C10orf126Q8N4M7 172 aa11.21□□□□□ -0.62
TRAF3-208ENST00000560371 A0A1B0GUT8 65 aa11.21□□□□□ -0.62
TRAF3-208ENST00000560371 CXorf65A6NEN9 183 aa11.21□□□□□ -0.62
TRAF3-208ENST00000560371 SHISA3A0PJX4 238 aa11.2□□□□□ -0.62
TRAF3-208ENST00000560371 CD8AP01732 235 aa11.2□□□□□ -0.62
TRAF3-208ENST00000560371 TMEM219Q86XT9 240 aa11.2□□□□□ -0.62
TRAF3-208ENST00000560371 LRTM2Q8N967 370 aa11.2□□□□□ -0.62
TRAF3-208ENST00000560371 CD7P09564 240 aa11.2□□□□□ -0.62
TRAF3-208ENST00000560371 JOSD1Q15040 202 aaPredicted RBP11.2□□□□□ -0.62
TRAF3-208ENST00000560371 TMEM170BQ5T4T1 132 aa11.2□□□□□ -0.62
TRAF3-208ENST00000560371 GTF3AQ92664 365 aaKnown RBP11.2□□□□□ -0.62
TRAF3-208ENST00000560371 KIAA1671Q9BY89 1806 aa11.2□□□□□ -0.62
TRAF3-208ENST00000560371 SRRM5B3KS81 715 aa11.2□□□□□ -0.62
TRAF3-208ENST00000560371 SMIM6P0DI80 62 aa11.2□□□□□ -0.62
TRAF3-208ENST00000560371 GATA2P23769 480 aaPredicted RBP11.2□□□□□ -0.62
TRAF3-208ENST00000560371 ZNF600Q6ZNG1 722 aa11.2□□□□□ -0.62
TRAF3-208ENST00000560371 TMEM178BH3BS89 294 aa11.2□□□□□ -0.62
TRAF3-208ENST00000560371 Q0VFX4 171 aa11.2□□□□□ -0.62
TRAF3-208ENST00000560371 LBHQ53QV2 105 aaPredicted RBP11.2□□□□□ -0.62
TRAF3-208ENST00000560371 MDS2Q8NDY4 140 aa11.2□□□□□ -0.62
TRAF3-208ENST00000560371 FMC1Q96HJ9 113 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 351.5 ms