RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 NIPSNAP3BQ9BS92 247 aa11.77□□□□□ -0.53
HERC1-207ENST00000560316 EHFQ9NZC4 300 aa11.77□□□□□ -0.53
HERC1-207ENST00000560316 DKK2Q9UBU2 259 aa11.77□□□□□ -0.53
HERC1-207ENST00000560316 TMEM189A5PLL7 270 aa11.76□□□□□ -0.53
HERC1-207ENST00000560316 ZNF705FA8MVS1 300 aaPredicted RBP11.76□□□□□ -0.53
HERC1-207ENST00000560316 H3BMM0 161 aa11.76□□□□□ -0.53
HERC1-207ENST00000560316 ZNF705DP0CH99 300 aaPredicted RBP11.76□□□□□ -0.53
HERC1-207ENST00000560316 ZNF705BP0CI00 300 aaPredicted RBP11.76□□□□□ -0.53
HERC1-207ENST00000560316 FGF9P31371 208 aaPredicted RBP11.76□□□□□ -0.53
HERC1-207ENST00000560316 ERHP84090 104 aaKnown RBP11.76□□□□□ -0.53
HERC1-207ENST00000560316 C6orf223Q8N319 242 aa11.76□□□□□ -0.53
HERC1-207ENST00000560316 OR5H6Q8NGV6 325 aa11.76□□□□□ -0.53
HERC1-207ENST00000560316 ZNF2Q9BSG1 426 aaPredicted RBP11.76□□□□□ -0.53
HERC1-207ENST00000560316 RNF167Q9H6Y7 350 aa11.76□□□□□ -0.53
HERC1-207ENST00000560316 MRPL36Q9P0J6 103 aaKnown RBP11.76□□□□□ -0.53
HERC1-207ENST00000560316 RRP15Q9Y3B9 282 aaKnown RBP11.76□□□□□ -0.53
HERC1-207ENST00000560316 DMBT1Q9UGM3 2413 aaPredicted RBP11.75□□□□□ -0.53
HERC1-207ENST00000560316 RFX2P48378 723 aa11.75□□□□□ -0.53
HERC1-207ENST00000560316 FXYD7P58549 80 aa11.75□□□□□ -0.53
HERC1-207ENST00000560316 TBCEQ15813 527 aaPredicted RBP11.75□□□□□ -0.53
HERC1-207ENST00000560316 TMEM230Q96A57 120 aa11.75□□□□□ -0.53
HERC1-207ENST00000560316 SLC25A38Q96DW6 304 aa11.75□□□□□ -0.53
HERC1-207ENST00000560316 NARS2Q96I59 477 aaKnown RBP11.75□□□□□ -0.53
HERC1-207ENST00000560316 YTHDF1Q9BYJ9 559 aaKnown RBP11.75□□□□□ -0.53
HERC1-207ENST00000560316 VCXQ9H320 206 aa11.75□□□□□ -0.53
HERC1-207ENST00000560316 TMED3Q9Y3Q3 217 aa11.75□□□□□ -0.53
HERC1-207ENST00000560316 HSPE1P61604 102 aaKnown RBP11.74□□□□□ -0.53
HERC1-207ENST00000560316 KCTD21Q4G0X4 260 aa11.74□□□□□ -0.53
HERC1-207ENST00000560316 SFXN4Q6P4A7 337 aa11.74□□□□□ -0.53
HERC1-207ENST00000560316 DHRS11Q6UWP2 260 aa11.74□□□□□ -0.53
HERC1-207ENST00000560316 H2BFWTQ7Z2G1 175 aa11.74□□□□□ -0.53
HERC1-207ENST00000560316 SPATA12Q7Z6I5 190 aa11.74□□□□□ -0.53
HERC1-207ENST00000560316 CMTM1Q8IZ96 169 aa11.74□□□□□ -0.53
HERC1-207ENST00000560316 SEC22AQ96IW7 307 aa11.74□□□□□ -0.53
HERC1-207ENST00000560316 FXYD6Q9H0Q3 95 aa11.74□□□□□ -0.53
HERC1-207ENST00000560316 AUNIPQ9H7T9 357 aa11.74□□□□□ -0.53
HERC1-207ENST00000560316 RFNGQ9Y644 331 aa11.74□□□□□ -0.53
HERC1-207ENST00000560316 NBDYA0A0U1RRE5 68 aa11.73□□□□□ -0.53
HERC1-207ENST00000560316 SMIM9A6NGZ8 99 aa11.73□□□□□ -0.53
HERC1-207ENST00000560316 FAM90A26D6RGX4 464 aa11.73□□□□□ -0.53
HERC1-207ENST00000560316 GPR31O00270 319 aa11.73□□□□□ -0.53
HERC1-207ENST00000560316 IGKV1-39P01597 117 aa11.73□□□□□ -0.53
HERC1-207ENST00000560316 IGKV1D-39P04432 117 aa11.73□□□□□ -0.53
HERC1-207ENST00000560316 MLANAQ16655 118 aa11.73□□□□□ -0.53
HERC1-207ENST00000560316 PHLDA2Q53GA4 152 aa11.73□□□□□ -0.53
HERC1-207ENST00000560316 TXNL4BQ9NX01 149 aaKnown RBP11.73□□□□□ -0.53
HERC1-207ENST00000560316 CLN5O75503 358 aa11.72□□□□□ -0.53
HERC1-207ENST00000560316 IGKV3-20P01619 116 aa11.72□□□□□ -0.53
HERC1-207ENST00000560316 PMP2P02689 132 aa11.72□□□□□ -0.53
HERC1-207ENST00000560316 SNCAP37840 140 aa11.72□□□□□ -0.53
HERC1-207ENST00000560316 CBX5P45973 191 aa11.72□□□□□ -0.53
HERC1-207ENST00000560316 EIF2B2P49770 351 aaKnown RBP11.72□□□□□ -0.53
HERC1-207ENST00000560316 AQP4P55087 323 aa11.72□□□□□ -0.53
HERC1-207ENST00000560316 FAM3BP58499 235 aaPredicted RBP11.72□□□□□ -0.53
HERC1-207ENST00000560316 SNRPD3P62318 126 aaKnown RBP11.72□□□□□ -0.53
HERC1-207ENST00000560316 IZUMO4Q1ZYL8 232 aa11.72□□□□□ -0.53
HERC1-207ENST00000560316 TIGITQ495A1 244 aa11.72□□□□□ -0.53
HERC1-207ENST00000560316 C16orf54Q6UWD8 224 aa11.72□□□□□ -0.53
HERC1-207ENST00000560316 GLMPQ8WWB7 406 aa11.72□□□□□ -0.53
HERC1-207ENST00000560316 MRGPRFQ96AM1 343 aa11.72□□□□□ -0.53
HERC1-207ENST00000560316 ATG101Q9BSB4 218 aa11.72□□□□□ -0.53
HERC1-207ENST00000560316 FNDC4Q9H6D8 234 aaPredicted RBP11.72□□□□□ -0.53
HERC1-207ENST00000560316 IFT46Q9NQC8 304 aa11.72□□□□□ -0.53
HERC1-207ENST00000560316 U3KQE9 123 aa11.72□□□□□ -0.53
HERC1-207ENST00000560316 TEX48A0A1B0GUV7 120 aa11.71□□□□□ -0.53
HERC1-207ENST00000560316 IGKV1-17P01599 117 aa11.71□□□□□ -0.53
HERC1-207ENST00000560316 HLA-DRB4P13762 266 aa11.71□□□□□ -0.53
HERC1-207ENST00000560316 DEFB1P60022 68 aa11.71□□□□□ -0.53
HERC1-207ENST00000560316 GDF5OSQ5U4N7 250 aa11.71□□□□□ -0.53
HERC1-207ENST00000560316 HLA-DRB4X5D2U9 266 aa11.71□□□□□ -0.53
HERC1-207ENST00000560316 CLEC2LP0C7M8 214 aa11.7□□□□□ -0.54
HERC1-207ENST00000560316 AP2S1P53680 142 aaPredicted RBP11.7□□□□□ -0.54
HERC1-207ENST00000560316 OXA1LQ15070 435 aa11.7□□□□□ -0.54
HERC1-207ENST00000560316 OR4X1Q8NH49 305 aa11.7□□□□□ -0.54
HERC1-207ENST00000560316 ZNRF2Q8NHG8 242 aa11.7□□□□□ -0.54
HERC1-207ENST00000560316 YTHDF2Q9Y5A9 579 aaKnown RBP11.7□□□□□ -0.54
HERC1-207ENST00000560316 A0A0A6YYH2 397 aa11.69□□□□□ -0.54
HERC1-207ENST00000560316 A6NJ64 397 aa11.69□□□□□ -0.54
HERC1-207ENST00000560316 HNRNPCP07910 306 aaKnown RBP eCLIP11.69□□□□□ -0.54
HERC1-207ENST00000560316 RNASE2P10153 161 aaKnown RBP11.69□□□□□ -0.54
HERC1-207ENST00000560316 OPRK1P41145 380 aa11.69□□□□□ -0.54
HERC1-207ENST00000560316 DAD1P61803 113 aa11.69□□□□□ -0.54
HERC1-207ENST00000560316 MXD1Q05195 221 aa11.69□□□□□ -0.54
HERC1-207ENST00000560316 IDNKQ5T6J7 187 aa11.69□□□□□ -0.54
HERC1-207ENST00000560316 TBC1D26Q86UD7 250 aa11.69□□□□□ -0.54
HERC1-207ENST00000560316 SLC35G3Q8N808 338 aa11.69□□□□□ -0.54
HERC1-207ENST00000560316 C15orf53Q8NAA6 179 aa11.69□□□□□ -0.54
HERC1-207ENST00000560316 DIABLOQ9NR28 239 aa11.69□□□□□ -0.54
HERC1-207ENST00000560316 EPM2AB3EWF7 344 aa11.68□□□□□ -0.54
HERC1-207ENST00000560316 SDC2P34741 201 aa11.68□□□□□ -0.54
HERC1-207ENST00000560316 KRTAP10-2P60368 255 aa11.68□□□□□ -0.54
HERC1-207ENST00000560316 OR5H2Q8NGV7 314 aa11.68□□□□□ -0.54
HERC1-207ENST00000560316 NRN1Q9NPD7 142 aa11.68□□□□□ -0.54
HERC1-207ENST00000560316 FAM212BQ9NTI7 297 aaPredicted RBP11.68□□□□□ -0.54
HERC1-207ENST00000560316 LOC102723971A0A1B0GUV8 181 aa11.67□□□□□ -0.54
HERC1-207ENST00000560316 CORTO00230 105 aa11.67□□□□□ -0.54
HERC1-207ENST00000560316 SCGB2A1O75556 95 aa11.67□□□□□ -0.54
HERC1-207ENST00000560316 SUB1P53999 127 aaKnown RBP eCLIP11.67□□□□□ -0.54
HERC1-207ENST00000560316 GSG1LQ6UXU4 331 aa11.67□□□□□ -0.54
HERC1-207ENST00000560316 ZNF709Q8N972 641 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms