RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 TECRQ9NZ01 308 aaKnown RBP9.46□□□□□ -0.9
RABGGTA-207ENST00000558936 KCNIP3Q9Y2W7 256 aa9.46□□□□□ -0.9
RABGGTA-207ENST00000558936 IGHV3-49A0A0A0MS15 119 aa9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 RBMY1BA6NDE4 496 aaKnown RBP9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 RBMY1EA6NEQ0 496 aaKnown RBP9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 C15orf62A8K5M9 175 aa9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 A8MZ25 164 aa9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 PRSS46E5RG02 174 aa9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 NDUFA4O00483 81 aa9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 HOXB5P09067 269 aa9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 OR4E1P0C645 316 aa9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 RBMY1DP0C7P1 496 aaKnown RBP9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 HOXA1P49639 335 aaPredicted RBP9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 MFAP4P55083 255 aa9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 ELLP55199 621 aaPredicted RBP9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 Q56UQ5 140 aa9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 GGNBP1Q5YKI7 109 aa9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 TRIQKQ629K1 86 aa9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 FAM90A2PQ658T7 463 aa9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 PRSS54Q6PEW0 395 aa9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 DYNC2H1Q8NCM8 4307 aaKnown RBP9.45□□□□□ -0.9
RABGGTA-207ENST00000558936 NBEAL2Q6ZNJ1 2754 aa9.44□□□□□ -0.9
RABGGTA-207ENST00000558936 IGKV1D-37A0A075B6S9 117 aa9.44□□□□□ -0.9
RABGGTA-207ENST00000558936 IGHV3OR16-13A0A075B7E8 117 aa9.44□□□□□ -0.9
RABGGTA-207ENST00000558936 IGHV3-74A0A0B4J1X5 117 aa9.44□□□□□ -0.9
RABGGTA-207ENST00000558936 NAP1L6A6NFF2 107 aa9.44□□□□□ -0.9
RABGGTA-207ENST00000558936 LYRM1O43325 122 aa9.44□□□□□ -0.9
RABGGTA-207ENST00000558936 SCAF4O95104 1147 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-207ENST00000558936 VAMP1P23763 118 aa9.44□□□□□ -0.9
RABGGTA-207ENST00000558936 PAX9P55771 341 aa9.44□□□□□ -0.9
RABGGTA-207ENST00000558936 SPSB3Q6PJ21 355 aa9.44□□□□□ -0.9
RABGGTA-207ENST00000558936 LINC00299Q6ZSB3 139 aa9.44□□□□□ -0.9
RABGGTA-207ENST00000558936 OR4X1Q8NH49 305 aa9.44□□□□□ -0.9
RABGGTA-207ENST00000558936 RNASE11Q8TAA1 199 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-207ENST00000558936 DYNLRB2Q8TF09 96 aa9.44□□□□□ -0.9
RABGGTA-207ENST00000558936 TXN2Q99757 166 aa9.44□□□□□ -0.9
RABGGTA-207ENST00000558936 STAB2Q8WWQ8 2551 aa9.44□□□□□ -0.9
RABGGTA-207ENST00000558936 PLECQ15149 4684 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 IGKV1OR2-108A0A075B7D4 117 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 PMS2P5A8MQ11 134 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 K7EMT4 169 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 CHEK1O14757 476 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 CLN5O75503 358 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 TCRBP04435 133 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 IGLC1P0CG04 106 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 SNCAP37840 140 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 TIGITQ495A1 244 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 LYG2Q86SG7 212 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 DEFB125Q8N687 156 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 STPG3Q8N7X2 389 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 SLC24A4Q8NFF2 622 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 OR4D5Q8NGN0 318 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 MARC2Q969Z3 335 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 RNF2Q99496 336 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 PDCD10Q9BUL8 212 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 MAGT1Q9H0U3 335 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 PALMDQ9NP74 551 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 MRPL27Q9P0M9 148 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 SMPXQ9UHP9 88 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 UFC1Q9Y3C8 167 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 U3KQK5 164 aa9.43□□□□□ -0.9
RABGGTA-207ENST00000558936 DUXBA0A1W2PPF3 345 aa9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 CEBPZOSA8MTT3 80 aa9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 CCNKO75909 580 aa9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 IAPPP10997 89 aa9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 SLC25A6P12236 298 aa9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 HTR2BP41595 481 aa9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 ID3Q02535 119 aa9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 GUCA2BQ16661 112 aa9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 GSG1LQ6UXU4 331 aa9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 GTSCR1Q86UQ5 136 aa9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 DTD1Q8TEA8 209 aa9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 NEURL2Q9BR09 285 aa9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 C7orf50Q9BRJ6 194 aaKnown RBP9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 SEC22CQ9BRL7 303 aa9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 C20orf85Q9H1P6 137 aa9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 HEYLQ9NQ87 328 aaPredicted RBP9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 GAR1Q9NY12 217 aaKnown RBP9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 PTTG2Q9NZH5 202 aa9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 PUS1Q9Y606 427 aaKnown RBP eCLIP9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 U3KQE9 123 aa9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 AGRNO00468 2067 aa9.42□□□□□ -0.9
RABGGTA-207ENST00000558936 TRAV6A0A075B6T7 132 aa9.41□□□□□ -0.9
RABGGTA-207ENST00000558936 IGHV7-4-1A0A0J9YVY3 117 aa9.41□□□□□ -0.9
RABGGTA-207ENST00000558936 NPY1RP25929 384 aa9.41□□□□□ -0.9
RABGGTA-207ENST00000558936 OPRK1P41145 380 aa9.41□□□□□ -0.9
RABGGTA-207ENST00000558936 CD81P60033 236 aa9.41□□□□□ -0.9
RABGGTA-207ENST00000558936 ZNF124Q15973 351 aa9.41□□□□□ -0.9
RABGGTA-207ENST00000558936 ODF3L2Q3SX64 289 aa9.41□□□□□ -0.9
RABGGTA-207ENST00000558936 TMEM182Q6ZP80 229 aaPredicted RBP9.41□□□□□ -0.9
RABGGTA-207ENST00000558936 FAM24BQ8N5W8 94 aa9.41□□□□□ -0.9
RABGGTA-207ENST00000558936 TMEM116Q8NCL8 245 aa9.41□□□□□ -0.9
RABGGTA-207ENST00000558936 MITD1Q8WV92 249 aa9.41□□□□□ -0.9
RABGGTA-207ENST00000558936 ST8SIA2Q92186 375 aa9.41□□□□□ -0.9
RABGGTA-207ENST00000558936 TM2D3Q9BRN9 247 aa9.41□□□□□ -0.9
RABGGTA-207ENST00000558936 C20orf24Q9BUV8 137 aa9.41□□□□□ -0.9
RABGGTA-207ENST00000558936 CCDC32Q9BV29 185 aa9.41□□□□□ -0.9
RABGGTA-207ENST00000558936 C11orf1Q9H5F2 150 aa9.41□□□□□ -0.9
RABGGTA-207ENST00000558936 VSIRQ9H7M9 311 aa9.41□□□□□ -0.9
RABGGTA-207ENST00000558936 ENY2Q9NPA8 101 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms