RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 FAM172AQ8WUF8 416 aa0.94□□□□□ -2.26
VPS13C-207ENST00000558919 TMEM106AQ96A25 262 aa0.94□□□□□ -2.26
VPS13C-207ENST00000558919 HOPXQ9BPY8 73 aaPredicted RBP0.94□□□□□ -2.26
VPS13C-207ENST00000558919 TIMM21Q9BVV7 248 aa0.94□□□□□ -2.26
VPS13C-207ENST00000558919 CHST6Q9GZX3 395 aa0.94□□□□□ -2.26
VPS13C-207ENST00000558919 TRABDQ9H4I3 376 aa0.94□□□□□ -2.26
VPS13C-207ENST00000558919 TP73-AS1Q9UF72 201 aa0.94□□□□□ -2.26
VPS13C-207ENST00000558919 RPL26L1Q9UNX3 145 aaKnown RBP0.94□□□□□ -2.26
VPS13C-207ENST00000558919 ERGIC3Q9Y282 383 aa0.94□□□□□ -2.26
VPS13C-207ENST00000558919 PCDH15Q96QU1 1955 aa0.94□□□□□ -2.26
VPS13C-207ENST00000558919 MUC5BQ9HC84 5762 aaPredicted RBP0.93□□□□□ -2.26
VPS13C-207ENST00000558919 DENND4BO75064 1496 aaPredicted RBP0.93□□□□□ -2.26
VPS13C-207ENST00000558919 RALGAPA2Q2PPJ7 1873 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 PCF11O94913 1555 aaKnown RBP0.93□□□□□ -2.26
VPS13C-207ENST00000558919 TMSB15BA0A087X1C1 80 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 TRAV4A0A0B4J268 109 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 TRBV10-2A0A0K0K1G8 114 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 A0A1B0GVG6 124 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 IGKV2-29A2NJV5 120 aaPredicted RBP0.93□□□□□ -2.26
VPS13C-207ENST00000558919 HMSDA8MTL9 139 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 C1orf196B1AJZ1 125 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 TRAPPC2LH3BP13 241 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 BUB1B-PAK6H3BSN5 160 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 AIPO00170 330 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 PGRMC1O00264 195 aaKnown RBP0.93□□□□□ -2.26
VPS13C-207ENST00000558919 OR2J2O76002 312 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 SPI1P17947 270 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 PEBP1P30086 187 aaKnown RBP0.93□□□□□ -2.26
VPS13C-207ENST00000558919 PHBP35232 272 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 G6PCP35575 357 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 ATP5G3P48201 142 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 ZNF80P51504 273 aaPredicted RBP0.93□□□□□ -2.26
VPS13C-207ENST00000558919 PIGPP57054 158 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 TAS2R41P59536 307 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 CDC42P60953 191 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 YPEL3P61236 119 aaPredicted RBP0.93□□□□□ -2.26
VPS13C-207ENST00000558919 NCALDP61601 193 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 B2MP61769 119 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 RHOBP62745 196 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 GNG3P63215 75 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 SUPT4H1P63272 117 aaKnown RBP0.93□□□□□ -2.26
VPS13C-207ENST00000558919 DR1Q01658 176 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 RHEBQ15382 184 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 TSNQ15631 228 aaKnown RBP0.93□□□□□ -2.26
VPS13C-207ENST00000558919 KISS1Q15726 138 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 NDUFA5Q16718 116 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 ZNF791Q3KP31 576 aaPredicted RBP0.93□□□□□ -2.26
VPS13C-207ENST00000558919 FAM27BQ5VT28 67 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 C3orf33Q6P1S2 294 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 LCA10Q71F78 164 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 MIR17HGQ75NE6 70 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 LRRC28Q86X40 367 aaPredicted RBP0.93□□□□□ -2.26
VPS13C-207ENST00000558919 HIST3H2BBQ8N257 126 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 TMEM86AQ8N2M4 240 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 STX19Q8N4C7 294 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 TERB2Q8NHR7 220 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 C11orf40Q8WZ69 217 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 ZHX1-C8orf76Q96EF9 292 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 GINS3Q9BRX5 216 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 TMEM70Q9BUB7 260 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 IMUPQ9GZP8 106 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 PCBD2Q9H0N5 130 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 CENPHQ9H3R5 247 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 BIN3Q9NQY0 253 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 OSTCQ9NRP0 149 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 LYRM2Q9NU23 88 aaPredicted RBP0.93□□□□□ -2.26
VPS13C-207ENST00000558919 PRNDQ9UKY0 176 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 RTTNQ86VV8 2226 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 ROCK1Q13464 1354 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 MAST2Q6P0Q8 1798 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 ZFHX2Q9C0A1 2572 aaPredicted RBP0.93□□□□□ -2.26
VPS13C-207ENST00000558919 CCDC88CQ9P219 2028 aa0.93□□□□□ -2.26
VPS13C-207ENST00000558919 TRBV19A0A075B6N1 114 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 A0A087X0T9 212 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 A0A0D9SEW6 157 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 A0A0D9SG52 128 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 MEIS3P1A6NDR6 274 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 OR51F1A6NGY5 319 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 SIGLEC16A6NMB1 481 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 ZNF705FA8MVS1 300 aaPredicted RBP0.92□□□□□ -2.26
VPS13C-207ENST00000558919 PPP5D1E7EU14 171 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 H7C1C5 153 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 CYB5BO43169 146 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 ORC5O43913 435 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 CST8O60676 142 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 BANF1O75531 89 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 TCL1BO95988 128 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 C1QBP02746 253 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 METTL15P1P0C7V9 234 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 TRGC1P0CF51 173 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 SERPINB1P30740 379 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 CRYBA4P53673 196 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 FXYD2P54710 66 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 LCN6P62502 163 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 GNG5P63218 68 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 EIF5AP63241 154 aaKnown RBP0.92□□□□□ -2.26
VPS13C-207ENST00000558919 SLC38A11Q08AI6 406 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 SNCBQ16143 134 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 LINC01554Q52M75 96 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 KHDC3LQ587J8 217 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms