RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 CHEK1O14757 476 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 SMIM13P0DJ93 91 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 KIR2DL2P43627 348 aaPredicted RBP13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 NXPH1P58417 271 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 ZNF329Q86UD4 541 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 GPR82Q96P67 336 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 AP5S1Q9NUS5 200 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 HIGD1BQ9P298 99 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 TP73-AS1Q9UF72 201 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 PRNDQ9UKY0 176 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 ESPL1Q14674 2120 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 DIDO1Q9BTC0 2240 aaKnown RBP13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 IGHV1-45A0A0A0MS14 117 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 C22orf46C9J442 243 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 FABP6P51161 128 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 C2orf83Q53S99 150 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 SAMD5Q5TGI4 173 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 ADAMTSL5Q6ZMM2 481 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 OR4A5Q8NH83 315 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 NANOS1Q8WY41 292 aaKnown RBP13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 MRAP2Q96G30 205 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 FAM167A-AS1Q96KT0 104 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 RAB9BQ9NP90 201 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 PILRBQ9UKJ0 227 aa13.22□□□□□ -0.29
HMBOX1-212ENST00000558662 SH2D7A6NKC9 451 aaPredicted RBP13.21□□□□□ -0.29
HMBOX1-212ENST00000558662 CKS1BP61024 79 aa13.21□□□□□ -0.29
HMBOX1-212ENST00000558662 RPL24P83731 157 aaKnown RBP13.21□□□□□ -0.29
HMBOX1-212ENST00000558662 RPRMLQ8N4K4 120 aa13.21□□□□□ -0.29
HMBOX1-212ENST00000558662 NEU4Q8WWR8 484 aaPredicted RBP13.21□□□□□ -0.29
HMBOX1-212ENST00000558662 UNC13CQ8NB66 2214 aa13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 SRRM4A7MD48 611 aaKnown RBP13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 PSPNO60542 156 aa13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 ZADH2Q8N4Q0 377 aa13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 OR1L8Q8NGR8 309 aa13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 COQ2Q96H96 371 aa13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 FMC1Q96HJ9 113 aa13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 VGLL1Q99990 258 aa13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 SLC25A2Q9BXI2 301 aa13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 TET2Q6N021 2002 aaPredicted RBP13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 TEX48A0A1B0GUV7 120 aa13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 P01737 135 aa13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 FOXA3P55318 350 aaPredicted RBP13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 ZXDAP98168 799 aa13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 GUSBP1Q15486 140 aa13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 LCNL1Q6ZST4 164 aa13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 WDR86Q86TI4 376 aa13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 PAXXQ9BUH6 204 aa13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 MLST8Q9BVC4 326 aa13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 GTSF1LQ9H1H1 148 aa13.2□□□□□ -0.3
HMBOX1-212ENST00000558662 IGHV1OR15-9A0A0B4J2B8 117 aa13.19□□□□□ -0.3
HMBOX1-212ENST00000558662 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.19□□□□□ -0.3
HMBOX1-212ENST00000558662 C19orf71A6NCJ1 209 aa13.19□□□□□ -0.3
HMBOX1-212ENST00000558662 SHISA9B4DS77 424 aa13.19□□□□□ -0.3
HMBOX1-212ENST00000558662 CCL2P13500 99 aa13.19□□□□□ -0.3
HMBOX1-212ENST00000558662 MYCNOSP40205 109 aa13.19□□□□□ -0.3
HMBOX1-212ENST00000558662 UQCRFS1P47985 274 aa13.19□□□□□ -0.3
HMBOX1-212ENST00000558662 RAB9AP51151 201 aa13.19□□□□□ -0.3
HMBOX1-212ENST00000558662 SMAGPQ0VAQ4 97 aa13.19□□□□□ -0.3
HMBOX1-212ENST00000558662 YRDCQ86U90 279 aaKnown RBP13.19□□□□□ -0.3
HMBOX1-212ENST00000558662 MED12LQ86YW9 2145 aa13.19□□□□□ -0.3
HMBOX1-212ENST00000558662 Q8TCH9 128 aa13.19□□□□□ -0.3
HMBOX1-212ENST00000558662 DDB2Q92466 427 aa13.19□□□□□ -0.3
HMBOX1-212ENST00000558662 CHD9Q3L8U1 2897 aa13.19□□□□□ -0.3
HMBOX1-212ENST00000558662 VWC2LB2RUY7 222 aa13.18□□□□□ -0.3
HMBOX1-212ENST00000558662 NPIPB6E9PJ23 425 aa13.18□□□□□ -0.3
HMBOX1-212ENST00000558662 C15orf65H3BRN8 121 aa13.18□□□□□ -0.3
HMBOX1-212ENST00000558662 MC5RP33032 325 aa13.18□□□□□ -0.3
HMBOX1-212ENST00000558662 PRCDQ00LT1 54 aa13.18□□□□□ -0.3
HMBOX1-212ENST00000558662 SRSF6Q13247 344 aaKnown RBP13.18□□□□□ -0.3
HMBOX1-212ENST00000558662 CR1LQ2VPA4 569 aa13.18□□□□□ -0.3
HMBOX1-212ENST00000558662 GCSAMQ8N6F7 178 aa13.18□□□□□ -0.3
HMBOX1-212ENST00000558662 IQCF6A8MYZ5 107 aa13.17□□□□□ -0.3
HMBOX1-212ENST00000558662 MGST3O14880 152 aa13.17□□□□□ -0.3
HMBOX1-212ENST00000558662 IGHV3-7P01780 117 aa13.17□□□□□ -0.3
HMBOX1-212ENST00000558662 AESQ08117 197 aa13.17□□□□□ -0.3
HMBOX1-212ENST00000558662 DAZAP1Q96EP5 407 aaKnown RBP13.17□□□□□ -0.3
HMBOX1-212ENST00000558662 PERPQ96FX8 193 aa13.17□□□□□ -0.3
HMBOX1-212ENST00000558662 TMUB1Q9BVT8 246 aa13.17□□□□□ -0.3
HMBOX1-212ENST00000558662 EPDR1Q9UM22 224 aa13.17□□□□□ -0.3
HMBOX1-212ENST00000558662 A0A096LPE4 126 aa13.17□□□□□ -0.3
HMBOX1-212ENST00000558662 A0A1W2PPZ6 126 aa13.17□□□□□ -0.3
HMBOX1-212ENST00000558662 EPOPA6NHQ4 379 aa13.17□□□□□ -0.3
HMBOX1-212ENST00000558662 COX6A1P12074 109 aa13.17□□□□□ -0.3
HMBOX1-212ENST00000558662 LINC01559Q495D7 138 aa13.17□□□□□ -0.3
HMBOX1-212ENST00000558662 SLC25A48Q6ZT89 311 aaKnown RBP13.17□□□□□ -0.3
HMBOX1-212ENST00000558662 FAM90A1Q86YD7 464 aa13.17□□□□□ -0.3
HMBOX1-212ENST00000558662 ABHD17AQ96GS6 310 aa13.17□□□□□ -0.3
HMBOX1-212ENST00000558662 CHD7Q9P2D1 2997 aa13.17□□□□□ -0.3
HMBOX1-212ENST00000558662 SRSF1Q07955 248 aaKnown RBP eCLIP13.16□□□□□ -0.34e-7■■■■□ 22.6
HMBOX1-212ENST00000558662 RIGQ13278 110 aa13.16□□□□□ -0.3
HMBOX1-212ENST00000558662 TBC1D28Q2M2D7 210 aa13.16□□□□□ -0.3
HMBOX1-212ENST00000558662 CFAP161Q6P656 301 aa13.16□□□□□ -0.3
HMBOX1-212ENST00000558662 DHRS13Q6UX07 377 aa13.16□□□□□ -0.3
HMBOX1-212ENST00000558662 Q6ZR03 302 aa13.16□□□□□ -0.3
HMBOX1-212ENST00000558662 Q6ZS92 163 aa13.16□□□□□ -0.3
HMBOX1-212ENST00000558662 OR5AN1Q8NGI8 311 aa13.16□□□□□ -0.3
HMBOX1-212ENST00000558662 GTSF1Q8WW33 167 aa13.16□□□□□ -0.3
HMBOX1-212ENST00000558662 TSSC4Q9Y5U2 329 aaPredicted RBP13.16□□□□□ -0.3
HMBOX1-212ENST00000558662 INS-IGF2F8WCM5 200 aa13.15□□□□□ -0.3
HMBOX1-212ENST00000558662 PROP1O75360 226 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms