RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 EHFQ9NZC4 300 aa12.71□□□□□ -0.37
TSPAN3-204ENST00000558394 SMIM9A6NGZ8 99 aa12.7□□□□□ -0.38
TSPAN3-204ENST00000558394 CRYBB3P26998 211 aa12.7□□□□□ -0.38
TSPAN3-204ENST00000558394 S100GP29377 79 aa12.7□□□□□ -0.38
TSPAN3-204ENST00000558394 SNCAP37840 140 aa12.7□□□□□ -0.38
TSPAN3-204ENST00000558394 CBX5P45973 191 aa12.7□□□□□ -0.38
TSPAN3-204ENST00000558394 SNRPD3P62318 126 aaKnown RBP12.7□□□□□ -0.38
TSPAN3-204ENST00000558394 TBCEQ15813 527 aaPredicted RBP12.7□□□□□ -0.38
TSPAN3-204ENST00000558394 NRG4Q8WWG1 115 aa12.7□□□□□ -0.38
TSPAN3-204ENST00000558394 ATG101Q9BSB4 218 aa12.7□□□□□ -0.38
TSPAN3-204ENST00000558394 ZNF2Q9BSG1 426 aaPredicted RBP12.7□□□□□ -0.38
TSPAN3-204ENST00000558394 IFT46Q9NQC8 304 aa12.7□□□□□ -0.38
TSPAN3-204ENST00000558394 RRP15Q9Y3B9 282 aaKnown RBP12.7□□□□□ -0.38
TSPAN3-204ENST00000558394 IGHV3OR16-12A0A075B7B8 117 aa12.69□□□□□ -0.38
TSPAN3-204ENST00000558394 AP2S1P53680 142 aaPredicted RBP12.69□□□□□ -0.38
TSPAN3-204ENST00000558394 FAM3BP58499 235 aaPredicted RBP12.69□□□□□ -0.38
TSPAN3-204ENST00000558394 NEU1Q99519 415 aa12.69□□□□□ -0.38
TSPAN3-204ENST00000558394 RFNGQ9Y644 331 aa12.69□□□□□ -0.38
TSPAN3-204ENST00000558394 CORTO00230 105 aa12.68□□□□□ -0.38
TSPAN3-204ENST00000558394 GPR31O00270 319 aa12.68□□□□□ -0.38
TSPAN3-204ENST00000558394 PPP5CP53041 499 aa12.68□□□□□ -0.38
TSPAN3-204ENST00000558394 HSPE1P61604 102 aaKnown RBP12.68□□□□□ -0.38
TSPAN3-204ENST00000558394 SFXN4Q6P4A7 337 aa12.68□□□□□ -0.38
TSPAN3-204ENST00000558394 DIABLOQ9NR28 239 aa12.68□□□□□ -0.38
TSPAN3-204ENST00000558394 A0A0A6YYH2 397 aa12.67□□□□□ -0.38
TSPAN3-204ENST00000558394 MEIS3P1A6NDR6 274 aa12.67□□□□□ -0.38
TSPAN3-204ENST00000558394 A6NJ64 397 aa12.67□□□□□ -0.38
TSPAN3-204ENST00000558394 SUB1P53999 127 aaKnown RBP eCLIP12.67□□□□□ -0.38
TSPAN3-204ENST00000558394 FAM222AQ5U5X8 452 aa12.67□□□□□ -0.38
TSPAN3-204ENST00000558394 DHRS11Q6UWP2 260 aa12.67□□□□□ -0.38
TSPAN3-204ENST00000558394 C6orf223Q8N319 242 aa12.67□□□□□ -0.38
TSPAN3-204ENST00000558394 DKK2Q9UBU2 259 aa12.67□□□□□ -0.38
TSPAN3-204ENST00000558394 LRP1BQ9NZR2 4599 aa12.67□□□□□ -0.38
TSPAN3-204ENST00000558394 H3BMM0 161 aa12.66□□□□□ -0.38
TSPAN3-204ENST00000558394 SPINK9Q5DT21 86 aa12.66□□□□□ -0.38
TSPAN3-204ENST00000558394 ZNF705AQ6ZN79 300 aaPredicted RBP12.66□□□□□ -0.38
TSPAN3-204ENST00000558394 AUNIPQ9H7T9 357 aa12.66□□□□□ -0.38
TSPAN3-204ENST00000558394 HERC1Q15751 4861 aa12.66□□□□□ -0.38
TSPAN3-204ENST00000558394 CLN5O75503 358 aa12.65□□□□□ -0.38
TSPAN3-204ENST00000558394 OPRK1P41145 380 aa12.65□□□□□ -0.38
TSPAN3-204ENST00000558394 RFX2P48378 723 aa12.65□□□□□ -0.38
TSPAN3-204ENST00000558394 SCAND1P57086 179 aa12.65□□□□□ -0.38
TSPAN3-204ENST00000558394 PHLDA2Q53GA4 152 aa12.65□□□□□ -0.38
TSPAN3-204ENST00000558394 TMEM88Q6PEY1 159 aa12.65□□□□□ -0.38
TSPAN3-204ENST00000558394 SLC35G3Q8N808 338 aa12.65□□□□□ -0.38
TSPAN3-204ENST00000558394 C15orf53Q8NAA6 179 aa12.65□□□□□ -0.38
TSPAN3-204ENST00000558394 OR5H2Q8NGV7 314 aa12.65□□□□□ -0.38
TSPAN3-204ENST00000558394 YTHDF1Q9BYJ9 559 aaKnown RBP12.65□□□□□ -0.38
TSPAN3-204ENST00000558394 VCX3BQ9H321 246 aa12.65□□□□□ -0.38
TSPAN3-204ENST00000558394 FAM212BQ9NTI7 297 aaPredicted RBP12.65□□□□□ -0.38
TSPAN3-204ENST00000558394 TXNL4BQ9NX01 149 aaKnown RBP12.65□□□□□ -0.38
TSPAN3-204ENST00000558394 ZNF705FA8MVS1 300 aaPredicted RBP12.64□□□□□ -0.39
TSPAN3-204ENST00000558394 PMP2P02689 132 aa12.64□□□□□ -0.39
TSPAN3-204ENST00000558394 ZNF705DP0CH99 300 aaPredicted RBP12.64□□□□□ -0.39
TSPAN3-204ENST00000558394 ZNF705BP0CI00 300 aaPredicted RBP12.64□□□□□ -0.39
TSPAN3-204ENST00000558394 OXA1LQ15070 435 aa12.64□□□□□ -0.39
TSPAN3-204ENST00000558394 OR6F1Q8NGZ6 308 aa12.64□□□□□ -0.39
TSPAN3-204ENST00000558394 SEC22AQ96IW7 307 aa12.64□□□□□ -0.39
TSPAN3-204ENST00000558394 PDCD10Q9BUL8 212 aa12.64□□□□□ -0.39
TSPAN3-204ENST00000558394 BLOC1S6Q9UL45 172 aa12.64□□□□□ -0.39
TSPAN3-204ENST00000558394 TRAV30A0A087WSZ9 112 aa12.63□□□□□ -0.39
TSPAN3-204ENST00000558394 NBDYA0A0U1RRE5 68 aa12.63□□□□□ -0.39
TSPAN3-204ENST00000558394 FAM90A26D6RGX4 464 aa12.63□□□□□ -0.39
TSPAN3-204ENST00000558394 HLA-DRB4P13762 266 aa12.63□□□□□ -0.39
TSPAN3-204ENST00000558394 HSPA13P48723 471 aa12.63□□□□□ -0.39
TSPAN3-204ENST00000558394 TAS2R46P59540 309 aa12.63□□□□□ -0.39
TSPAN3-204ENST00000558394 LPCAT3Q6P1A2 487 aa12.63□□□□□ -0.39
TSPAN3-204ENST00000558394 GSG1LQ6UXU4 331 aa12.63□□□□□ -0.39
TSPAN3-204ENST00000558394 IZUMO2Q6UXV1 221 aa12.63□□□□□ -0.39
TSPAN3-204ENST00000558394 OR5H6Q8NGV6 325 aa12.63□□□□□ -0.39
TSPAN3-204ENST00000558394 OR4X1Q8NH49 305 aa12.63□□□□□ -0.39
TSPAN3-204ENST00000558394 MRGPRFQ96AM1 343 aa12.63□□□□□ -0.39
TSPAN3-204ENST00000558394 SLC25A38Q96DW6 304 aa12.63□□□□□ -0.39
TSPAN3-204ENST00000558394 CNBD2Q96M20 576 aa12.63□□□□□ -0.39
TSPAN3-204ENST00000558394 SEPSECSQ9HD40 501 aaKnown RBP12.63□□□□□ -0.39
TSPAN3-204ENST00000558394 ENY2Q9NPA8 101 aa12.63□□□□□ -0.39
TSPAN3-204ENST00000558394 HLA-DRB4X5D2U9 266 aa12.63□□□□□ -0.39
TSPAN3-204ENST00000558394 IGKV3-20P01619 116 aa12.62□□□□□ -0.39
TSPAN3-204ENST00000558394 HNRNPCP07910 306 aaKnown RBP eCLIP12.62□□□□□ -0.39
TSPAN3-204ENST00000558394 HOXA1P49639 335 aaPredicted RBP12.62□□□□□ -0.39
TSPAN3-204ENST00000558394 FXYD7P58549 80 aa12.62□□□□□ -0.39
TSPAN3-204ENST00000558394 DAD1P61803 113 aa12.62□□□□□ -0.39
TSPAN3-204ENST00000558394 MXD1Q05195 221 aa12.62□□□□□ -0.39
TSPAN3-204ENST00000558394 TIGITQ495A1 244 aa12.62□□□□□ -0.39
TSPAN3-204ENST00000558394 IDNKQ5T6J7 187 aa12.62□□□□□ -0.39
TSPAN3-204ENST00000558394 C16orf54Q6UWD8 224 aa12.62□□□□□ -0.39
TSPAN3-204ENST00000558394 SPATA12Q7Z6I5 190 aa12.62□□□□□ -0.39
TSPAN3-204ENST00000558394 TBC1D26Q86UD7 250 aa12.62□□□□□ -0.39
TSPAN3-204ENST00000558394 GLMPQ8WWB7 406 aa12.62□□□□□ -0.39
TSPAN3-204ENST00000558394 C7orf50Q9BRJ6 194 aaKnown RBP12.62□□□□□ -0.39
TSPAN3-204ENST00000558394 FXYD6Q9H0Q3 95 aa12.62□□□□□ -0.39
TSPAN3-204ENST00000558394 NRN1Q9NPD7 142 aa12.62□□□□□ -0.39
TSPAN3-204ENST00000558394 SSR3Q9UNL2 185 aa12.62□□□□□ -0.39
TSPAN3-204ENST00000558394 HBE1P02100 147 aa12.61□□□□□ -0.39
TSPAN3-204ENST00000558394 Q8WTZ3 238 aa12.61□□□□□ -0.39
TSPAN3-204ENST00000558394 GOLT1BQ9Y3E0 138 aa12.61□□□□□ -0.39
TSPAN3-204ENST00000558394 NKX2-1P43699 371 aaPredicted RBP12.6□□□□□ -0.39
TSPAN3-204ENST00000558394 TSPAN5P62079 268 aa12.6□□□□□ -0.39
TSPAN3-204ENST00000558394 MRPL36Q9P0J6 103 aaKnown RBP12.6□□□□□ -0.39
TSPAN3-204ENST00000558394 YTHDF2Q9Y5A9 579 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms