RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SAXO1Q8IYX7 474 aa11.69□□□□□ -0.54
SPG11-210ENST00000558319 OR13A1Q8NGR1 328 aa11.69□□□□□ -0.54
SPG11-210ENST00000558319 TMEM186Q96B77 213 aa11.69□□□□□ -0.54
SPG11-210ENST00000558319 FOXD3Q9UJU5 478 aaPredicted RBP11.69□□□□□ -0.54
SPG11-210ENST00000558319 CD7P09564 240 aa11.69□□□□□ -0.54
SPG11-210ENST00000558319 DNM1P46Q6ZS02 220 aa11.69□□□□□ -0.54
SPG11-210ENST00000558319 LOXL4Q96JB6 756 aa11.69□□□□□ -0.54
SPG11-210ENST00000558319 C1orf53Q5VUE5 145 aa11.69□□□□□ -0.54
SPG11-210ENST00000558319 UBE2DNLQ8IWF7 75 aa11.69□□□□□ -0.54
SPG11-210ENST00000558319 MAPK1IP1LQ8NDC0 245 aa11.69□□□□□ -0.54
SPG11-210ENST00000558319 VSIRQ9H7M9 311 aa11.69□□□□□ -0.54
SPG11-210ENST00000558319 ST20Q9HBF5 79 aa11.69□□□□□ -0.54
SPG11-210ENST00000558319 RAB9AP51151 201 aa11.69□□□□□ -0.54
SPG11-210ENST00000558319 OR5P3Q8WZ94 311 aa11.69□□□□□ -0.54
SPG11-210ENST00000558319 ATAD5Q96QE3 1844 aa11.69□□□□□ -0.54
SPG11-210ENST00000558319 FOXH1O75593 365 aa11.69□□□□□ -0.54
SPG11-210ENST00000558319 TNFSF13O75888 250 aa11.69□□□□□ -0.54
SPG11-210ENST00000558319 M0R2P5 195 aa11.68□□□□□ -0.54
SPG11-210ENST00000558319 IGHV1-2P23083 117 aa11.68□□□□□ -0.54
SPG11-210ENST00000558319 WFDC1Q9HC57 220 aa11.68□□□□□ -0.54
SPG11-210ENST00000558319 GGTLC3B5MD39 225 aa11.68□□□□□ -0.54
SPG11-210ENST00000558319 ZNF625Q96I27 306 aaPredicted RBP11.68□□□□□ -0.54
SPG11-210ENST00000558319 ERG28Q9UKR5 140 aa11.68□□□□□ -0.54
SPG11-210ENST00000558319 MCRIP2Q9BUT9 160 aaKnown RBP11.68□□□□□ -0.54
SPG11-210ENST00000558319 SCRT1Q9BWW7 348 aa11.68□□□□□ -0.54
SPG11-210ENST00000558319 BTCP35070 178 aa11.68□□□□□ -0.54
SPG11-210ENST00000558319 TNFRSF14Q92956 283 aa11.68□□□□□ -0.54
SPG11-210ENST00000558319 TCRBV4S1A1TA0A5B7 111 aa11.68□□□□□ -0.54
SPG11-210ENST00000558319 IFI27P40305 119 aaPredicted RBP11.68□□□□□ -0.54
SPG11-210ENST00000558319 SRSF1Q07955 248 aaKnown RBP eCLIP11.68□□□□□ -0.542e-7■■■■□ 21.9
SPG11-210ENST00000558319 HSD52Q0P140 79 aa11.68□□□□□ -0.54
SPG11-210ENST00000558319 KLRD1Q13241 179 aa11.68□□□□□ -0.54
SPG11-210ENST00000558319 ACP7Q6ZNF0 438 aa11.68□□□□□ -0.54
SPG11-210ENST00000558319 OR10W1Q8NGF6 305 aa11.68□□□□□ -0.54
SPG11-210ENST00000558319 ARPC1AQ92747 370 aa11.68□□□□□ -0.54
SPG11-210ENST00000558319 TRAV9-1A0A075B6T8 112 aa11.67□□□□□ -0.54
SPG11-210ENST00000558319 C12orf77C9JDV5 145 aa11.67□□□□□ -0.54
SPG11-210ENST00000558319 ATXN8Q156A1 80 aa11.67□□□□□ -0.54
SPG11-210ENST00000558319 C9orf106Q8NAJ2 232 aa11.67□□□□□ -0.54
SPG11-210ENST00000558319 A0A0G2JK05 382 aa11.67□□□□□ -0.54
SPG11-210ENST00000558319 ERVK11-1P61568 191 aa11.67□□□□□ -0.54
SPG11-210ENST00000558319 TMEM42Q69YG0 159 aa11.67□□□□□ -0.54
SPG11-210ENST00000558319 B9A039 149 aa11.67□□□□□ -0.54
SPG11-210ENST00000558319 SSBP2P81877 361 aaPredicted RBP11.67□□□□□ -0.54
SPG11-210ENST00000558319 LCN12Q6JVE5 192 aa11.67□□□□□ -0.54
SPG11-210ENST00000558319 NXT2Q9NPJ8 142 aaKnown RBP11.67□□□□□ -0.54
SPG11-210ENST00000558319 A0A087WV48 116 aa11.67□□□□□ -0.54
SPG11-210ENST00000558319 NAPSAO96009 420 aa11.67□□□□□ -0.54
SPG11-210ENST00000558319 TDGF1P3P51864 188 aa11.67□□□□□ -0.54
SPG11-210ENST00000558319 C18orf12Q96KH6 178 aa11.67□□□□□ -0.54
SPG11-210ENST00000558319 CD28P10747 220 aa11.66□□□□□ -0.54
SPG11-210ENST00000558319 BCL6BQ8N143 479 aaPredicted RBP11.66□□□□□ -0.54
SPG11-210ENST00000558319 ARFGEF1Q9Y6D6 1849 aa11.66□□□□□ -0.54
SPG11-210ENST00000558319 SPINK8P0C7L1 97 aa11.66□□□□□ -0.54
SPG11-210ENST00000558319 CIARTQ8N365 385 aaPredicted RBP11.66□□□□□ -0.54
SPG11-210ENST00000558319 TRAV40A0A0B4J280 105 aa11.66□□□□□ -0.54
SPG11-210ENST00000558319 A0A1W2PRE2 83 aa11.66□□□□□ -0.54
SPG11-210ENST00000558319 CFHR5Q9BXR6 569 aa11.66□□□□□ -0.54
SPG11-210ENST00000558319 IFI27L1Q96BM0 104 aa11.66□□□□□ -0.54
SPG11-210ENST00000558319 ZXDCQ2QGD7 858 aaPredicted RBP11.66□□□□□ -0.54
SPG11-210ENST00000558319 RAMP3O60896 148 aa11.65□□□□□ -0.54
SPG11-210ENST00000558319 NCR2O95944 276 aa11.65□□□□□ -0.54
SPG11-210ENST00000558319 SEC11AP67812 179 aa11.65□□□□□ -0.54
SPG11-210ENST00000558319 COL4A1P02462 1669 aa11.65□□□□□ -0.54
SPG11-210ENST00000558319 TMEM105Q8N8V8 129 aa11.65□□□□□ -0.54
SPG11-210ENST00000558319 EFEMP2O95967 443 aa11.65□□□□□ -0.54
SPG11-210ENST00000558319 GUSBP1Q15486 140 aa11.65□□□□□ -0.54
SPG11-210ENST00000558319 GNB1LQ9BYB4 327 aa11.65□□□□□ -0.54
SPG11-210ENST00000558319 RGPD3A6NKT7 1758 aaPredicted RBP11.65□□□□□ -0.54
SPG11-210ENST00000558319 COLCA2A8K830 154 aa11.65□□□□□ -0.54
SPG11-210ENST00000558319 LINC00158P58513 81 aa11.65□□□□□ -0.54
SPG11-210ENST00000558319 RSPO3Q9BXY4 272 aaPredicted RBP11.65□□□□□ -0.54
SPG11-210ENST00000558319 TMEM256Q8N2U0 113 aa11.65□□□□□ -0.54
SPG11-210ENST00000558319 SP7Q8TDD2 431 aaPredicted RBP11.65□□□□□ -0.54
SPG11-210ENST00000558319 TMEM54Q969K7 222 aa11.65□□□□□ -0.54
SPG11-210ENST00000558319 SEPSECSQ9HD40 501 aaKnown RBP11.65□□□□□ -0.54
SPG11-210ENST00000558319 PLNP26678 52 aa11.64□□□□□ -0.55
SPG11-210ENST00000558319 MRAPQ8TCY5 172 aa11.64□□□□□ -0.55
SPG11-210ENST00000558319 MPV17L2Q567V2 206 aa11.64□□□□□ -0.55
SPG11-210ENST00000558319 IGHV2OR16-5A0A0B4J2B6 119 aa11.64□□□□□ -0.55
SPG11-210ENST00000558319 A0A1B0GW15 77 aa11.64□□□□□ -0.55
SPG11-210ENST00000558319 UCP1P25874 307 aa11.64□□□□□ -0.55
SPG11-210ENST00000558319 USP54Q70EL1 1684 aa11.64□□□□□ -0.55
SPG11-210ENST00000558319 ARAP2Q8WZ64 1704 aa11.64□□□□□ -0.55
SPG11-210ENST00000558319 LY6G6FQ5SQ64 297 aa11.64□□□□□ -0.55
SPG11-210ENST00000558319 ATP5L2Q7Z4Y8 100 aa11.64□□□□□ -0.55
SPG11-210ENST00000558319 ZNF703Q9H7S9 590 aaPredicted RBP11.64□□□□□ -0.55
SPG11-210ENST00000558319 OTORQ9NRC9 128 aa11.64□□□□□ -0.55
SPG11-210ENST00000558319 H0YIZ8 118 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 Q6AWC8 147 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 C21orf62Q9NYP8 219 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 RFNGQ9Y644 331 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 QSER1Q2KHR3 1735 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 IGHMP01871 453 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 BRD3OSQ6XYD6 125 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 UMODP07911 640 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 C2orf82Q6UX34 121 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 Q6ZT83 130 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 FABP5P3A8MUU1 101 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 IGFL4Q6B9Z1 124 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms