RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 TCF24Q7RTU0 167 aa6.31□□□□□ -1.4
VRK1-206ENST00000557222 OR6F1Q8NGZ6 308 aa6.31□□□□□ -1.4
VRK1-206ENST00000557222 SLC25A46Q96AG3 418 aa6.31□□□□□ -1.4
VRK1-206ENST00000557222 S100A16Q96FQ6 103 aaKnown RBP6.31□□□□□ -1.4
VRK1-206ENST00000557222 ZNF2Q9BSG1 426 aaPredicted RBP6.31□□□□□ -1.4
VRK1-206ENST00000557222 TMEM231Q9H6L2 316 aa6.31□□□□□ -1.4
VRK1-206ENST00000557222 IFT46Q9NQC8 304 aa6.31□□□□□ -1.4
VRK1-206ENST00000557222 FBXL17Q9UF56 701 aa6.31□□□□□ -1.4
VRK1-206ENST00000557222 APLNQ9ULZ1 77 aa6.31□□□□□ -1.4
VRK1-206ENST00000557222 IGHV3OR16-8A0A075B7F1 116 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 A0A1W2PS18 150 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 INS-IGF2F8WCM5 200 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 DNASE2O00115 360 aaPredicted RBP6.3□□□□□ -1.4
VRK1-206ENST00000557222 GNG7O60262 68 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 MT-CO2P00403 227 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 SPP1P10451 314 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 MIFP14174 115 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 TFPI2P48307 235 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 RFX2P48378 723 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 HSPE1P61604 102 aaKnown RBP6.3□□□□□ -1.4
VRK1-206ENST00000557222 ERHP84090 104 aaKnown RBP6.3□□□□□ -1.4
VRK1-206ENST00000557222 PRCDQ00LT1 54 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 KCTD21Q4G0X4 260 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 MORN3Q6PF18 240 aaPredicted RBP6.3□□□□□ -1.4
VRK1-206ENST00000557222 TOMM20LQ6UXN7 152 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 ZNF600Q6ZNG1 722 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 OR5H2Q8NGV7 314 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 OR4A16Q8NH70 328 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 GRAMD2BQ96HH9 432 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 SEC22AQ96IW7 307 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 MS4A6AQ9H2W1 248 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 NSG2Q9Y328 171 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 PKD1P98161 4303 aa6.3□□□□□ -1.4
VRK1-206ENST00000557222 ZNF705EA8MWA4 302 aaPredicted RBP6.29□□□□□ -1.4
VRK1-206ENST00000557222 IGLL5B9A064 214 aa6.29□□□□□ -1.4
VRK1-206ENST00000557222 ST8SIA3O43173 380 aa6.29□□□□□ -1.4
VRK1-206ENST00000557222 CLEC2LP0C7M8 214 aa6.29□□□□□ -1.4
VRK1-206ENST00000557222 UCP3P55916 312 aa6.29□□□□□ -1.4
VRK1-206ENST00000557222 DEFB131AP59861 70 aa6.29□□□□□ -1.4
VRK1-206ENST00000557222 MXD1Q05195 221 aa6.29□□□□□ -1.4
VRK1-206ENST00000557222 PVRIGQ6DKI7 326 aa6.29□□□□□ -1.4
VRK1-206ENST00000557222 H2BFWTQ7Z2G1 175 aa6.29□□□□□ -1.4
VRK1-206ENST00000557222 STHQ8IWL8 128 aa6.29□□□□□ -1.4
VRK1-206ENST00000557222 CENPSQ8N2Z9 138 aa6.29□□□□□ -1.4
VRK1-206ENST00000557222 GBGT1Q8N5D6 347 aa6.29□□□□□ -1.4
VRK1-206ENST00000557222 Q8NAQ8 132 aa6.29□□□□□ -1.4
VRK1-206ENST00000557222 RNF126Q9BV68 326 aa6.29□□□□□ -1.4
VRK1-206ENST00000557222 IGKV3-7A0A075B6H7 116 aa6.28□□□□□ -1.4
VRK1-206ENST00000557222 TRAV10A0A0B4J240 114 aa6.28□□□□□ -1.4
VRK1-206ENST00000557222 ANKRD65E5RJM6 399 aa6.28□□□□□ -1.4
VRK1-206ENST00000557222 CORTO00230 105 aa6.28□□□□□ -1.4
VRK1-206ENST00000557222 SCGB2A1O75556 95 aa6.28□□□□□ -1.4
VRK1-206ENST00000557222 TMEM50AO95807 157 aa6.28□□□□□ -1.4
VRK1-206ENST00000557222 PMP2P02689 132 aa6.28□□□□□ -1.4
VRK1-206ENST00000557222 NPPCP23582 126 aa6.28□□□□□ -1.4
VRK1-206ENST00000557222 PRSS3P35030 304 aa6.28□□□□□ -1.4
VRK1-206ENST00000557222 UBE2NLQ5JXB2 153 aa6.28□□□□□ -1.4
VRK1-206ENST00000557222 TRPT1Q86TN4 253 aaKnown RBP6.28□□□□□ -1.4
VRK1-206ENST00000557222 ST8SIA2Q92186 375 aa6.28□□□□□ -1.4
VRK1-206ENST00000557222 FXYD6Q9H0Q3 95 aa6.28□□□□□ -1.4
VRK1-206ENST00000557222 Q9H521 79 aa6.28□□□□□ -1.4
VRK1-206ENST00000557222 IGHV3OR16-13A0A075B7E8 117 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 IGHV3-49A0A0A0MS15 119 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 IGHV3-74A0A0B4J1X5 117 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 IGHV4-28A0A0C4DH34 117 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 LOC100506127A0A0U1RQW1 187 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 KRTAP23-1A1A580 65 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 MEIS3P1A6NDR6 274 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 K7EQG2 157 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 ATG12O94817 140 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 FCER2P06734 321 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 GIG44P09565 113 aaPredicted RBP6.27□□□□□ -1.41
VRK1-206ENST00000557222 RBMY1A1P0DJD3 496 aaKnown RBP6.27□□□□□ -1.41
VRK1-206ENST00000557222 RBMY1CP0DJD4 496 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 CRYBB3P26998 211 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 SNCAP37840 140 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 RPL5P46777 297 aaKnown RBP6.27□□□□□ -1.41
VRK1-206ENST00000557222 SUB1P53999 127 aaKnown RBP eCLIP6.27□□□□□ -1.416e-12■■■□□ 19.1
VRK1-206ENST00000557222 TAS2R20P59543 309 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 RBMY1FQ15415 496 aaKnown RBP6.27□□□□□ -1.41
VRK1-206ENST00000557222 TMEM69Q5SWH9 247 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 TBC1D26Q86UD7 250 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 LYSMD2Q8IV50 215 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 NARS2Q96I59 477 aaKnown RBP6.27□□□□□ -1.41
VRK1-206ENST00000557222 METTL26Q96S19 204 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 RNF167Q9H6Y7 350 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 SCPEP1Q9HB40 452 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 SEPSECSQ9HD40 501 aaKnown RBP6.27□□□□□ -1.41
VRK1-206ENST00000557222 PUS1Q9Y606 427 aaKnown RBP eCLIP6.27□□□□□ -1.41
VRK1-206ENST00000557222 AGRNO00468 2067 aa6.27□□□□□ -1.41
VRK1-206ENST00000557222 MUC4Q99102 2169 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 IGHV4-4A0A075B6R2 117 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 TRAV30A0A087WSZ9 112 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 DEFB4AO15263 64 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 IGKV1-39P01597 117 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 APOHP02749 345 aaPredicted RBP6.26□□□□□ -1.41
VRK1-206ENST00000557222 AMBPP02760 352 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 IGKV1D-39P04432 117 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 P0DMU3 169 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 FAM231AP0DMU4 169 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms