RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 HIST1H2BJP06899 126 aa8.09□□□□□ -1.11
TMEM260-211ENST00000556648 HIST1H2BOP23527 126 aa8.09□□□□□ -1.11
TMEM260-211ENST00000556648 HIST1H2BBP33778 126 aa8.09□□□□□ -1.11
TMEM260-211ENST00000556648 HIST1H2BDP58876 126 aa8.09□□□□□ -1.11
TMEM260-211ENST00000556648 HIST1H2BCP62807 126 aa8.09□□□□□ -1.11
TMEM260-211ENST00000556648 HIST2H2BEQ16778 126 aa8.09□□□□□ -1.11
TMEM260-211ENST00000556648 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.09□□□□□ -1.11
TMEM260-211ENST00000556648 PATE2Q6UY27 113 aa8.09□□□□□ -1.11
TMEM260-211ENST00000556648 NANPQ8TBE9 248 aa8.09□□□□□ -1.11
TMEM260-211ENST00000556648 HIST1H2BHQ93079 126 aa8.09□□□□□ -1.11
TMEM260-211ENST00000556648 FAM167A-AS1Q96KT0 104 aa8.09□□□□□ -1.11
TMEM260-211ENST00000556648 UHRF2Q96PU4 802 aa8.09□□□□□ -1.11
TMEM260-211ENST00000556648 C12orf57Q99622 126 aa8.09□□□□□ -1.11
TMEM260-211ENST00000556648 HIST1H2BNQ99877 126 aa8.09□□□□□ -1.11
TMEM260-211ENST00000556648 HIST1H2BMQ99879 126 aa8.09□□□□□ -1.11
TMEM260-211ENST00000556648 SLC25A33Q9BSK2 321 aa8.09□□□□□ -1.11
TMEM260-211ENST00000556648 GSX1Q9H4S2 264 aaPredicted RBP8.09□□□□□ -1.11
TMEM260-211ENST00000556648 CHODLQ9H9P2 273 aa8.09□□□□□ -1.11
TMEM260-211ENST00000556648 TECRQ9NZ01 308 aaKnown RBP8.09□□□□□ -1.11
TMEM260-211ENST00000556648 AMMECR1Q9Y4X0 333 aaPredicted RBP8.09□□□□□ -1.11
TMEM260-211ENST00000556648 TPRP12270 2363 aaKnown RBP8.09□□□□□ -1.12
TMEM260-211ENST00000556648 TRBV24-1A0A075B6N3 115 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 TCRBV4S1A1TA0A5B7 111 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 GGTLC3B5MD39 225 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 ZFP36P26651 326 aaKnown RBP8.08□□□□□ -1.12
TMEM260-211ENST00000556648 PPP1R27Q86WC6 154 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 THAP8Q8NA92 274 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 PYGO2Q9BRQ0 406 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 A0A1W2PPQ1 181 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 PCP4L1A6NKN8 68 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 K7EN84 100 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 SNRPCP09234 159 aaKnown RBP8.08□□□□□ -1.12
TMEM260-211ENST00000556648 TRGC1P0CF51 173 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 PYYP10082 97 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 MEOX2P50222 304 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 SUB1P53999 127 aaKnown RBP eCLIP8.08□□□□□ -1.12
TMEM260-211ENST00000556648 GFI1BQ5VTD9 330 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 PVRIGQ6DKI7 326 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 DYNAPQ8N1N2 210 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 CFHR4Q92496 578 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 C11orf52Q96A22 123 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 HIVEP3Q5T1R4 2406 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 ITPR1Q14643 2758 aa8.08□□□□□ -1.12
TMEM260-211ENST00000556648 ODF3BA8MYP8 253 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 MT-CO2P00403 227 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 CRYGCP07315 174 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 C8orf88P0DMB2 117 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 CRYBB3P26998 211 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 HTR1DP28221 377 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 GPR6P46095 362 aaPredicted RBP8.07□□□□□ -1.12
TMEM260-211ENST00000556648 FAM3BP58499 235 aaPredicted RBP8.07□□□□□ -1.12
TMEM260-211ENST00000556648 OR5AU1Q8NGC0 362 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 OR11H6Q8NGC7 330 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 OR4X1Q8NH49 305 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 OCC1Q8TAD7 63 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 SRSF12Q8WXF0 261 aaKnown RBP8.07□□□□□ -1.12
TMEM260-211ENST00000556648 ANAPC16Q96DE5 110 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 OR5B12Q96R08 314 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 ZNF355PQ9NSJ1 428 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 M0R1W7 72 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 COX7A2P2O60397 106 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 SFTPCP11686 197 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 PLGLAQ15195 96 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 VMO1Q7Z5L0 202 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 TXNDC17Q9BRA2 123 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 MRPL32Q9BYC8 188 aaKnown RBP8.07□□□□□ -1.12
TMEM260-211ENST00000556648 DNAJC4Q9NNZ3 241 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 TMEM167BQ9NRX6 74 aa8.07□□□□□ -1.12
TMEM260-211ENST00000556648 A0A0U1RQK1 487 aa8.06□□□□□ -1.12
TMEM260-211ENST00000556648 A6NNC1 897 aa8.06□□□□□ -1.12
TMEM260-211ENST00000556648 GGCTO75223 188 aaKnown RBP8.06□□□□□ -1.12
TMEM260-211ENST00000556648 HOXB4P17483 251 aaPredicted RBP8.06□□□□□ -1.12
TMEM260-211ENST00000556648 HOXA5P20719 270 aa8.06□□□□□ -1.12
TMEM260-211ENST00000556648 S100PP25815 95 aa8.06□□□□□ -1.12
TMEM260-211ENST00000556648 UBE2L3P68036 154 aaKnown RBP8.06□□□□□ -1.12
TMEM260-211ENST00000556648 LCN2P80188 198 aa8.06□□□□□ -1.12
TMEM260-211ENST00000556648 MMDQ15546 238 aa8.06□□□□□ -1.12
TMEM260-211ENST00000556648 C10orf113Q5VZT2 155 aa8.06□□□□□ -1.12
TMEM260-211ENST00000556648 PQLC2Q6ZP29 291 aa8.06□□□□□ -1.12
TMEM260-211ENST00000556648 SFRP2Q96HF1 295 aa8.06□□□□□ -1.12
TMEM260-211ENST00000556648 TNFRSF19Q9NS68 423 aa8.06□□□□□ -1.12
TMEM260-211ENST00000556648 DPM3Q9P2X0 92 aa8.06□□□□□ -1.12
TMEM260-211ENST00000556648 F11RQ9Y624 299 aaKnown RBP8.06□□□□□ -1.12
TMEM260-211ENST00000556648 MDFIC2A0A1B0GVS7 189 aa8.05□□□□□ -1.12
TMEM260-211ENST00000556648 PRTN3P24158 256 aa8.05□□□□□ -1.12
TMEM260-211ENST00000556648 SRP14P37108 136 aaKnown RBP8.05□□□□□ -1.12
TMEM260-211ENST00000556648 TAS2R45P59539 299 aa8.05□□□□□ -1.12
TMEM260-211ENST00000556648 OR5I1Q13606 314 aa8.05□□□□□ -1.12
TMEM260-211ENST00000556648 PDZD11Q5EBL8 140 aa8.05□□□□□ -1.12
TMEM260-211ENST00000556648 OR2T10Q8NGZ9 312 aa8.05□□□□□ -1.12
TMEM260-211ENST00000556648 OR1P1Q8NH06 330 aa8.05□□□□□ -1.12
TMEM260-211ENST00000556648 FAM103A1Q9BTL3 118 aaKnown RBP8.05□□□□□ -1.12
TMEM260-211ENST00000556648 SRD5A3Q9H8P0 318 aa8.05□□□□□ -1.12
TMEM260-211ENST00000556648 SLC17A3O00476 420 aa8.05□□□□□ -1.12
TMEM260-211ENST00000556648 NBR2O15453 112 aa8.05□□□□□ -1.12
TMEM260-211ENST00000556648 ORM2P19652 201 aa8.05□□□□□ -1.12
TMEM260-211ENST00000556648 SSX2Q16385 188 aa8.05□□□□□ -1.12
TMEM260-211ENST00000556648 CENPWQ5EE01 88 aa8.05□□□□□ -1.12
TMEM260-211ENST00000556648 TEX38Q6PEX7 206 aa8.05□□□□□ -1.12
TMEM260-211ENST00000556648 OR1B1Q8NGR6 318 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms