RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 M0R381 172 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 NUDT3O95989 172 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 FER1L5A0AVI2 2057 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 LINC00205P59089 165 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 ELOBQ15370 118 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 PRSS8Q16651 343 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 SCGB1D4Q6XE38 83 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 ZNF600Q6ZNG1 722 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 KLHL30-AS1Q8NEE0 82 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 PARLQ9H300 379 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 MBNL3Q9NUK0 354 aaKnown RBP14.24□□□□□ -0.13
PTPN21-208ENST00000556564 ETV2O00321 342 aaPredicted RBP14.23□□□□□ -0.13
PTPN21-208ENST00000556564 PVRIGQ6DKI7 326 aa14.23□□□□□ -0.13
PTPN21-208ENST00000556564 RCC1LQ96I51 464 aaKnown RBP14.23□□□□□ -0.13
PTPN21-208ENST00000556564 OTX1P32242 354 aaPredicted RBP14.23□□□□□ -0.13
PTPN21-208ENST00000556564 SLX1AQ9BQ83 275 aa14.23□□□□□ -0.13
PTPN21-208ENST00000556564 DCAF16Q9NXF7 216 aa14.23□□□□□ -0.13
PTPN21-208ENST00000556564 LINC00862A6NCI5 91 aa14.23□□□□□ -0.13
PTPN21-208ENST00000556564 GCGP01275 180 aa14.23□□□□□ -0.13
PTPN21-208ENST00000556564 ASIPP42127 132 aa14.23□□□□□ -0.13
PTPN21-208ENST00000556564 GSX1Q9H4S2 264 aaPredicted RBP14.23□□□□□ -0.13
PTPN21-208ENST00000556564 SRSF7Q16629 238 aaKnown RBP eCLIP14.23□□□□□ -0.13
PTPN21-208ENST00000556564 NTF4P34130 210 aa14.23□□□□□ -0.13
PTPN21-208ENST00000556564 SMDT1Q9H4I9 107 aa14.23□□□□□ -0.13
PTPN21-208ENST00000556564 TRAV3A0A0B4J244 114 aa14.22□□□□□ -0.13
PTPN21-208ENST00000556564 AREGP15514 252 aa14.22□□□□□ -0.13
PTPN21-208ENST00000556564 KLF17Q5JT82 389 aaPredicted RBP14.22□□□□□ -0.13
PTPN21-208ENST00000556564 NAT1P18440 290 aa14.22□□□□□ -0.13
PTPN21-208ENST00000556564 RELBQ01201 579 aa14.22□□□□□ -0.13
PTPN21-208ENST00000556564 LCNL1Q6ZST4 164 aa14.22□□□□□ -0.13
PTPN21-208ENST00000556564 HS3ST6Q96QI5 342 aa14.22□□□□□ -0.13
PTPN21-208ENST00000556564 PHF3Q92576 2039 aaKnown RBP14.22□□□□□ -0.13
PTPN21-208ENST00000556564 OOSP1A8MZH6 123 aa14.22□□□□□ -0.13
PTPN21-208ENST00000556564 PLA2G5P39877 138 aa14.22□□□□□ -0.13
PTPN21-208ENST00000556564 SCO2A0A1W2PP80 73 aa14.22□□□□□ -0.13
PTPN21-208ENST00000556564 TMEM144Q7Z5S9 345 aa14.22□□□□□ -0.13
PTPN21-208ENST00000556564 HIST1H2BAQ96A08 127 aa14.22□□□□□ -0.13
PTPN21-208ENST00000556564 NMBP08949 121 aa14.22□□□□□ -0.13
PTPN21-208ENST00000556564 TRGC1P0CF51 173 aa14.22□□□□□ -0.13
PTPN21-208ENST00000556564 GNG5P63218 68 aa14.22□□□□□ -0.13
PTPN21-208ENST00000556564 PEX7O00628 323 aa14.21□□□□□ -0.13
PTPN21-208ENST00000556564 DLX1P56177 255 aa14.21□□□□□ -0.13
PTPN21-208ENST00000556564 DUX4L9Q6RFH8 374 aaPredicted RBP14.21□□□□□ -0.13
PTPN21-208ENST00000556564 Q6ZR03 302 aa14.21□□□□□ -0.13
PTPN21-208ENST00000556564 KLK15Q9H2R5 256 aa14.21□□□□□ -0.13
PTPN21-208ENST00000556564 TRGV2A0A075B6R0 118 aa14.21□□□□□ -0.13
PTPN21-208ENST00000556564 PACRGQ96M98 296 aaPredicted RBP14.21□□□□□ -0.13
PTPN21-208ENST00000556564 BTCP35070 178 aa14.21□□□□□ -0.14
PTPN21-208ENST00000556564 C12orf54Q6X4T0 127 aa14.21□□□□□ -0.14
PTPN21-208ENST00000556564 TMEM191AQ9H0A3 160 aa14.21□□□□□ -0.14
PTPN21-208ENST00000556564 C5orf64Q2M2E5 130 aa14.21□□□□□ -0.14
PTPN21-208ENST00000556564 CR1LQ2VPA4 569 aa14.21□□□□□ -0.14
PTPN21-208ENST00000556564 HEATR1Q9H583 2144 aaKnown RBP14.2□□□□□ -0.14
PTPN21-208ENST00000556564 OR4C46A6NHA9 309 aa14.2□□□□□ -0.14
PTPN21-208ENST00000556564 MAP1LC3AQ9H492 121 aa14.2□□□□□ -0.14
PTPN21-208ENST00000556564 ATP5G3P48201 142 aa14.2□□□□□ -0.14
PTPN21-208ENST00000556564 SIGLEC15Q6ZMC9 328 aa14.2□□□□□ -0.14
PTPN21-208ENST00000556564 PIP4P2Q8N4L2 257 aa14.2□□□□□ -0.14
PTPN21-208ENST00000556564 TMEM183BQ1AE95 376 aa14.2□□□□□ -0.14
PTPN21-208ENST00000556564 ZNF383Q8NA42 475 aa14.2□□□□□ -0.14
PTPN21-208ENST00000556564 TBX15Q96SF7 602 aa14.2□□□□□ -0.14
PTPN21-208ENST00000556564 A0A0B4J293 547 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 PSMG4Q5JS54 123 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 TCF24Q7RTU0 167 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 SFRP2Q96HF1 295 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 C12orf57Q99622 126 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 SDF2L1Q9HCN8 221 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 CCKARP32238 428 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 NAPSAO96009 420 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 PRTN3P24158 256 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 TEX38Q6PEX7 206 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 ZNF502Q8TBZ5 544 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 GRIFINA4D1Z8 144 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 ICE1Q9Y2F5 2266 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 CEP250Q9BV73 2442 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 LINC00473A8K010 186 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 LDLRAD4O15165 306 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 ZNF324O75467 553 aaPredicted RBP14.19□□□□□ -0.14
PTPN21-208ENST00000556564 PYYP10082 97 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 GATA3P23771 443 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 LEPP41159 167 aa14.19□□□□□ -0.14
PTPN21-208ENST00000556564 RPL15P61313 204 aaKnown RBP14.19□□□□□ -0.14
PTPN21-208ENST00000556564 PLXNB3Q9ULL4 1909 aa14.18□□□□□ -0.14
PTPN21-208ENST00000556564 IGHV2-70DA0A0C4DH43 119 aa14.18□□□□□ -0.14
PTPN21-208ENST00000556564 FAM71F2Q6NXP2 309 aa14.18□□□□□ -0.14
PTPN21-208ENST00000556564 FMC1Q96HJ9 113 aa14.18□□□□□ -0.14
PTPN21-208ENST00000556564 FAM90A9PA6NNJ1 464 aa14.18□□□□□ -0.14
PTPN21-208ENST00000556564 MPZP25189 248 aa14.18□□□□□ -0.14
PTPN21-208ENST00000556564 IGFL2Q6UWQ7 119 aa14.18□□□□□ -0.14
PTPN21-208ENST00000556564 NDPQ00604 133 aa14.18□□□□□ -0.14
PTPN21-208ENST00000556564 IGHV1-69DA0A0B4J2H0 117 aa14.17□□□□□ -0.14
PTPN21-208ENST00000556564 IGHV1-69P01742 117 aa14.17□□□□□ -0.14
PTPN21-208ENST00000556564 MRPL18Q9H0U6 180 aaKnown RBP14.17□□□□□ -0.14
PTPN21-208ENST00000556564 FAM209BQ5JX69 171 aa14.17□□□□□ -0.14
PTPN21-208ENST00000556564 OR1N2Q8NGR9 330 aa14.17□□□□□ -0.14
PTPN21-208ENST00000556564 TGIF2-C20orf24A0A0A6YYL0 155 aa14.17□□□□□ -0.14
PTPN21-208ENST00000556564 CD7P09564 240 aa14.17□□□□□ -0.14
PTPN21-208ENST00000556564 EFNB3Q15768 340 aa14.17□□□□□ -0.14
PTPN21-208ENST00000556564 TP53BP1Q12888 1972 aaPredicted RBP14.17□□□□□ -0.14
PTPN21-208ENST00000556564 AGAP20933 346 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms