RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 TMEM116Q8NCL8 245 aa8.51□□□□□ -1.05
LINC01550-206ENST00000556462 OR5R1Q8NH85 324 aa8.51□□□□□ -1.05
LINC01550-206ENST00000556462 FAM213BQ8TBF2 198 aa8.51□□□□□ -1.05
LINC01550-206ENST00000556462 ACY3Q96HD9 319 aa8.51□□□□□ -1.05
LINC01550-206ENST00000556462 SLC35E1Q96K37 410 aa8.51□□□□□ -1.05
LINC01550-206ENST00000556462 TMUB1Q9BVT8 246 aa8.51□□□□□ -1.05
LINC01550-206ENST00000556462 TMA7Q9Y2S6 64 aaKnown RBP8.51□□□□□ -1.05
LINC01550-206ENST00000556462 IGKV1D-37A0A075B6S9 117 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 G3V318 75 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 RPL29P47914 159 aaKnown RBP8.5□□□□□ -1.05
LINC01550-206ENST00000556462 CRIP2P52943 208 aaPredicted RBP8.5□□□□□ -1.05
LINC01550-206ENST00000556462 ELLP55199 621 aaPredicted RBP8.5□□□□□ -1.05
LINC01550-206ENST00000556462 ZNF726P1Q15940 193 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 C19orf54Q5BKX5 351 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 FFAR4Q5NUL3 377 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 MIC13Q5XKP0 118 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 UNQ5815/PRO19632Q6UWF5 114 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 SPNS3Q6ZMD2 512 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 COMMD7Q86VX2 200 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 CCDC28AQ8IWP9 274 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 TMEM68Q96MH6 324 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 HRH4Q9H3N8 390 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 YAE1D1Q9NRH1 226 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 SLC45A2Q9UMX9 530 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 HOXA3O43365 443 aaPredicted RBP8.5□□□□□ -1.05
LINC01550-206ENST00000556462 YIF1AO95070 293 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 IGF1P05019 195 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 LINC00869P0C866 280 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 OR10J1P30954 320 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 RND2P52198 227 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 RAB2AP61019 212 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 PRR20EP86478 221 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 PRR20CP86479 221 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 PRR20DP86480 221 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 PRR20BP86481 221 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 PRR20AP86496 221 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 ZNF616Q08AN1 781 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 RAB31Q13636 194 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 ECSCRQ19T08 205 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 KLK9Q2XQG4 91 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 TMEM41BQ5BJD5 291 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 DPPA3Q6W0C5 159 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 THAP8Q8NA92 274 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 FAM110DQ8TAY7 271 aaPredicted RBP8.5□□□□□ -1.05
LINC01550-206ENST00000556462 SMR3AQ99954 134 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 TNFRSF19Q9NS68 423 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 VPREB3Q9UKI3 123 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 KLK9Q9UKQ9 250 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 PXMP4Q9Y6I8 212 aa8.5□□□□□ -1.05
LINC01550-206ENST00000556462 SOX15O60248 233 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 GCSAMLQ5JQS6 135 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 C9orf152Q5JTZ5 239 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 SPSB3Q6PJ21 355 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 SSX7Q7RTT5 188 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 STPG3Q8N7X2 389 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 PFDN2Q9UHV9 154 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 LINC00527Q9UJ94 153 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 CUBNO60494 3623 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 MFSD2BA6NFX1 497 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 TSPAN15O95858 294 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 MBP02144 154 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 H2AFB1P0C5Y9 115 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 GATA2P23769 480 aaPredicted RBP8.49□□□□□ -1.05
LINC01550-206ENST00000556462 B2MP61769 119 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 SLC35E3Q7Z769 313 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 SIGLECL1Q8N7X8 197 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 MARC2Q969Z3 335 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 RCC1LQ96I51 464 aaKnown RBP8.49□□□□□ -1.05
LINC01550-206ENST00000556462 CITED4Q96RK1 184 aa8.49□□□□□ -1.05
LINC01550-206ENST00000556462 TRBV9A0A0B4J1U6 114 aa8.48□□□□□ -1.05
LINC01550-206ENST00000556462 TRAV41A0A0B4J266 112 aa8.48□□□□□ -1.05
LINC01550-206ENST00000556462 BTBD17A6NE02 478 aa8.48□□□□□ -1.05
LINC01550-206ENST00000556462 NDUFB8O95169 186 aa8.48□□□□□ -1.05
LINC01550-206ENST00000556462 SRP14P37108 136 aaKnown RBP8.48□□□□□ -1.05
LINC01550-206ENST00000556462 ZNF90Q03938 601 aa8.48□□□□□ -1.05
LINC01550-206ENST00000556462 EIF4E3Q8N5X7 224 aaKnown RBP8.48□□□□□ -1.05
LINC01550-206ENST00000556462 BPIFCQ8NFQ6 507 aa8.48□□□□□ -1.05
LINC01550-206ENST00000556462 OR10G4Q8NGN3 311 aa8.48□□□□□ -1.05
LINC01550-206ENST00000556462 OR10G9Q8NGN4 311 aa8.48□□□□□ -1.05
LINC01550-206ENST00000556462 OR10G7Q8NGN6 311 aa8.48□□□□□ -1.05
LINC01550-206ENST00000556462 OR4X1Q8NH49 305 aa8.48□□□□□ -1.05
LINC01550-206ENST00000556462 MBD3L1Q8WWY6 194 aa8.48□□□□□ -1.05
LINC01550-206ENST00000556462 SLC39A9Q9NUM3 307 aa8.48□□□□□ -1.05
LINC01550-206ENST00000556462 TCRBV4S1A1TA0A5B7 111 aa8.47□□□□□ -1.05
LINC01550-206ENST00000556462 ZFP92A6NM28 416 aa8.47□□□□□ -1.05
LINC01550-206ENST00000556462 EIF3GO75821 320 aaKnown RBP eCLIP8.47□□□□□ -1.05
LINC01550-206ENST00000556462 TSPAN9O75954 239 aa8.47□□□□□ -1.05
LINC01550-206ENST00000556462 OR2J3O76001 311 aa8.47□□□□□ -1.05
LINC01550-206ENST00000556462 PPIFP30405 207 aaKnown RBP8.47□□□□□ -1.05
LINC01550-206ENST00000556462 CCL20P78556 96 aa8.47□□□□□ -1.05
LINC01550-206ENST00000556462 ACOT6Q3I5F7 207 aaPredicted RBP8.47□□□□□ -1.05
LINC01550-206ENST00000556462 CYP2G1PQ6ZSU1 146 aa8.47□□□□□ -1.05
LINC01550-206ENST00000556462 SFT2D1Q8WV19 159 aa8.47□□□□□ -1.05
LINC01550-206ENST00000556462 NOL4LQ96MY1 436 aaPredicted RBP8.47□□□□□ -1.05
LINC01550-206ENST00000556462 GSX1Q9H4S2 264 aaPredicted RBP8.47□□□□□ -1.05
LINC01550-206ENST00000556462 KCNIP2Q9NS61 270 aa8.47□□□□□ -1.05
LINC01550-206ENST00000556462 THYN1Q9P016 225 aa8.47□□□□□ -1.05
LINC01550-206ENST00000556462 PRELID1Q9Y255 219 aa8.47□□□□□ -1.05
LINC01550-206ENST00000556462 TRAV1-1A0A0B4J248 108 aa8.47□□□□□ -1.05
LINC01550-206ENST00000556462 F8W735 103 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms