RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 C11orf53Q8IXP5 236 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 GAPTQ8N292 157 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 FGFRL1Q8N441 504 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 FAM24BQ8N5W8 94 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 HSD17B11Q8NBQ5 300 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 OR52M1Q8NGK5 317 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 OR4C13Q8NGP0 309 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 OR5C1Q8NGR4 320 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 OR10J5Q8NHC4 309 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 OR2T6Q8NHC8 308 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 MAFIPQ8WZ33 124 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 CIB3Q96Q77 187 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-240ENST00000556339 TP53RKQ96S44 253 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 CITED1Q99966 193 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 HDHD3Q9BSH5 251 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-240ENST00000556339 DCTN5Q9BTE1 182 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 SMIM3Q9BZL3 60 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 GSN-AS1Q9NRJ2 163 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 LIN7CQ9NUP9 197 aaKnown RBP3.15□□□□□ -1.91
ATXN3-240ENST00000556339 OR14J1Q9UGF5 321 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 VAX2Q9UIW0 290 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 POLDIP2Q9Y2S7 368 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 IGSF23A1L1A6 192 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 SMCO3A2RU48 225 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 FAM24AA6NFZ4 105 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 FAM90A9PA6NNJ1 464 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 J3QT63 122 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 M0R1W7 72 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 PPP1R2P9O14990 202 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 SIGLEC5O15389 551 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 SYNGR2O43760 224 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 SSSCA1O60232 199 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 NXPH2O95156 264 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 PTBP3O95758 552 aaKnown RBP3.14□□□□□ -1.91
ATXN3-240ENST00000556339 IGLV2-11P01706 119 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 TFF1P04155 84 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 BCL2P10415 239 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 PSG2P11465 335 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 SELLP14151 372 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 COX7A1P24310 79 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 PRDX2P32119 198 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 SAA4P35542 130 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 PPP1CCP36873 323 aaKnown RBP3.14□□□□□ -1.91
ATXN3-240ENST00000556339 RPS10P46783 165 aaKnown RBP3.14□□□□□ -1.91
ATXN3-240ENST00000556339 DYNLT3P51808 116 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 KRTAP10-3P60369 221 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 SSTP61278 116 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 POLR2GP62487 172 aaKnown RBP eCLIP3.14□□□□□ -1.91
ATXN3-240ENST00000556339 RPL31P62899 125 aaKnown RBP3.14□□□□□ -1.91
ATXN3-240ENST00000556339 RPP30P78346 268 aaKnown RBP3.14□□□□□ -1.91
ATXN3-240ENST00000556339 DLK1P80370 383 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 PAX5Q02548 391 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 KIAA0141Q14154 515 aaPredicted RBP3.14□□□□□ -1.91
ATXN3-240ENST00000556339 HERPUD1Q15011 391 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 ELOBQ15370 118 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 LRRC75BQ2VPJ9 315 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 PIGYQ3MUY2 71 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 TMEM41BQ5BJD5 291 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 DMRTC1Q5HYR2 192 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 COA6Q5JTJ3 125 aaKnown RBP3.14□□□□□ -1.91
ATXN3-240ENST00000556339 SLC25A24Q6NUK1 477 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 TRAT1Q6PIZ9 186 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 DUX4L9Q6RFH8 374 aaPredicted RBP3.14□□□□□ -1.91
ATXN3-240ENST00000556339 ZNF818PQ6ZRF7 136 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 RTN4RL2Q86UN3 420 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 FAM58AQ8N1B3 248 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 PNKDQ8N490 385 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 ZNRF1Q8ND25 227 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 LY6G5BQ8NDX9 201 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 OR10V1Q8NGI7 309 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 MRPL30Q8TCC3 161 aaKnown RBP3.14□□□□□ -1.91
ATXN3-240ENST00000556339 RNASEH2CQ8TDP1 164 aaKnown RBP3.14□□□□□ -1.91
ATXN3-240ENST00000556339 C2CD4CQ8TF44 421 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 OR5P3Q8WZ94 311 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 ACY3Q96HD9 319 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 GAFA1Q96PS6 74 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 IMMP2LQ96T52 175 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 PYGO2Q9BRQ0 406 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 GGACTQ9BVM4 153 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 NPFFR1Q9GZQ6 430 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 MAGT1Q9H0U3 335 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 C16orf95Q9H693 158 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 SDF2L1Q9HCN8 221 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 MANBALQ9NQG1 85 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 NIT2Q9NQR4 276 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 KCNIP1Q9NZI2 227 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 PITPNC1Q9UKF7 332 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 VPREB3Q9UKI3 123 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 SIGLEC9Q9Y336 463 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 FBXO7Q9Y3I1 522 aa3.14□□□□□ -1.91
ATXN3-240ENST00000556339 PUS1Q9Y606 427 aaKnown RBP eCLIP3.14□□□□□ -1.91
ATXN3-240ENST00000556339 TRAV9-1A0A075B6T8 112 aa3.13□□□□□ -1.91
ATXN3-240ENST00000556339 CTXND1A0A1B0GTU2 59 aa3.13□□□□□ -1.91
ATXN3-240ENST00000556339 C17orf112F2Z3M2 114 aa3.13□□□□□ -1.91
ATXN3-240ENST00000556339 SH2D1BO14796 132 aa3.13□□□□□ -1.91
ATXN3-240ENST00000556339 MPDU1O75352 247 aa3.13□□□□□ -1.91
ATXN3-240ENST00000556339 CLN5O75503 358 aa3.13□□□□□ -1.91
ATXN3-240ENST00000556339 RHBDL1O75783 438 aa3.13□□□□□ -1.91
ATXN3-240ENST00000556339 ARG1P05089 322 aa3.13□□□□□ -1.91
ATXN3-240ENST00000556339 OR13C7P0DN81 318 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms