RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 ZNF486Q96H40 463 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-237ENST00000556274 TMEM68Q96MH6 324 aa3.58□□□□□ -1.84
ATXN3-237ENST00000556274 TMEM56Q96MV1 263 aa3.58□□□□□ -1.84
ATXN3-237ENST00000556274 OR4C12Q96R67 309 aa3.58□□□□□ -1.84
ATXN3-237ENST00000556274 TP53RKQ96S44 253 aa3.58□□□□□ -1.84
ATXN3-237ENST00000556274 P2RX4Q99571 388 aa3.58□□□□□ -1.84
ATXN3-237ENST00000556274 NEURL2Q9BR09 285 aa3.58□□□□□ -1.84
ATXN3-237ENST00000556274 RTBDNQ9BSG5 229 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-237ENST00000556274 MCRIP2Q9BUT9 160 aaKnown RBP3.58□□□□□ -1.84
ATXN3-237ENST00000556274 SLA2Q9H6Q3 261 aa3.58□□□□□ -1.84
ATXN3-237ENST00000556274 RANGRFQ9HD47 186 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-237ENST00000556274 FKBP11Q9NYL4 201 aa3.58□□□□□ -1.84
ATXN3-237ENST00000556274 BET1LQ9NYM9 111 aa3.58□□□□□ -1.84
ATXN3-237ENST00000556274 PEF1Q9UBV8 284 aaKnown RBP3.58□□□□□ -1.84
ATXN3-237ENST00000556274 SELENOKQ9Y6D0 94 aa3.58□□□□□ -1.84
ATXN3-237ENST00000556274 IGHV3-35A0A0C4DH35 117 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 CEBPZOSA8MTT3 80 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 PPP5D1E7EU14 171 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 I3L521 148 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 RBFOX2O43251 390 aaKnown RBP eCLIP3.57□□□□□ -1.84
ATXN3-237ENST00000556274 OR2C1O95371 312 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 PTTG1O95997 202 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 IGHV3-48P01763 117 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 HLA-AP01891 365 aaKnown RBP3.57□□□□□ -1.84
ATXN3-237ENST00000556274 LGALS1P09382 135 aaKnown RBP3.57□□□□□ -1.84
ATXN3-237ENST00000556274 ANXA3P12429 323 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 HIST1H1BP16401 226 aaKnown RBP3.57□□□□□ -1.84
ATXN3-237ENST00000556274 S100A1P23297 94 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 PTBP1P26599 531 aaKnown RBP eCLIP3.57□□□□□ -1.844e-18■■■■■ 40.6
ATXN3-237ENST00000556274 PSMB6P28072 239 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 SLC6A1P30531 599 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 SNCAP37840 140 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 CCR6P51684 374 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 SYNJ2BPP57105 145 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 DEFA1P59665 94 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 DEFA3P59666 94 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 ERHP84090 104 aaKnown RBP3.57□□□□□ -1.84
ATXN3-237ENST00000556274 DHODHQ02127 395 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 EXOSC2Q13868 293 aaKnown RBP3.57□□□□□ -1.84
ATXN3-237ENST00000556274 KIAA0141Q14154 515 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-237ENST00000556274 RPEL1Q2QD12 228 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 C15orf32Q32M92 178 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 C9orf66Q5T8R8 295 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 CCDC190Q86UF4 302 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 SELENOHQ8IZQ5 122 aaKnown RBP3.57□□□□□ -1.84
ATXN3-237ENST00000556274 SLC35G3Q8N808 338 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 GDPD1Q8N9F7 314 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 UXS1Q8NBZ7 420 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 NEXN-AS1Q8NBZ9 246 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 MRAPQ8TCY5 172 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 DLX4Q92988 240 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-237ENST00000556274 EEF1AKMT3Q96AZ1 226 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 PINX1Q96BK5 328 aaKnown RBP3.57□□□□□ -1.84
ATXN3-237ENST00000556274 USMG5Q96IX5 58 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 SOSTQ9BQB4 213 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 CCDC32Q9BV29 185 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 NAA60Q9H7X0 242 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 COMMD9Q9P000 198 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 THYN1Q9P016 225 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 HSPB7Q9UBY9 170 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 PRNDQ9UKY0 176 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 GPR132Q9UNW8 380 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 ZNF257Q9Y2Q1 563 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 V9GYH0 126 aa3.57□□□□□ -1.84
ATXN3-237ENST00000556274 VWFP04275 2813 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 FAM223BA6NKX1 122 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 H0Y980 276 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 H3BUA1 57 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 ST8SIA3O43173 380 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 ATP6V1G1O75348 118 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 UPK1BO75841 260 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 NDUFB4O95168 129 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 DUS4LO95620 317 aaKnown RBP3.56□□□□□ -1.84
ATXN3-237ENST00000556274 IGKV1-39P01597 117 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 TRBV12-3P01733 135 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 IGKV1D-39P04432 117 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 CLEC3BP05452 202 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 HOXB5P09067 269 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 ZP3P21754 424 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 ARL3P36405 182 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 HOXA1P49639 335 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-237ENST00000556274 CRIP2P52943 208 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-237ENST00000556274 SUB1P53999 127 aaKnown RBP eCLIP3.56□□□□□ -1.84
ATXN3-237ENST00000556274 KRTAP10-6P60371 365 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-237ENST00000556274 RND3P61587 244 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 HSPE1P61604 102 aaKnown RBP3.56□□□□□ -1.84
ATXN3-237ENST00000556274 ZNF79Q15937 498 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 Q56UQ5 140 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 PLET1Q6UQ28 207 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 NOXA1Q86UR1 476 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 HAPLN4Q86UW8 402 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 LHFPL1Q86WI0 220 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 FAM223AQ8IWN6 122 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 NECAP1Q8NC96 275 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 WFDC9Q8NEX5 89 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 OR1S1Q8NH92 325 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 GLYATL2Q8WU03 294 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 TMED6Q8WW62 240 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 GPR146Q96CH1 333 aa3.56□□□□□ -1.84
ATXN3-237ENST00000556274 SEC22AQ96IW7 307 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms