RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 GRAMD2BQ96HH9 432 aa10.35□□□□□ -0.75
CHMP4BP1-201ENST00000556017 TP53RKQ96S44 253 aa10.35□□□□□ -0.75
CHMP4BP1-201ENST00000556017 U3KQE9 123 aa10.35□□□□□ -0.75
CHMP4BP1-201ENST00000556017 IGHV4-4A0A075B6R2 117 aa10.34□□□□□ -0.75
CHMP4BP1-201ENST00000556017 DNASE2O00115 360 aaPredicted RBP10.34□□□□□ -0.75
CHMP4BP1-201ENST00000556017 MIFP14174 115 aa10.34□□□□□ -0.75
CHMP4BP1-201ENST00000556017 ERHP84090 104 aaKnown RBP10.34□□□□□ -0.75
CHMP4BP1-201ENST00000556017 LHFPL1Q86WI0 220 aa10.34□□□□□ -0.75
CHMP4BP1-201ENST00000556017 CROCCP3Q8IVE0 287 aa10.34□□□□□ -0.75
CHMP4BP1-201ENST00000556017 STHQ8IWL8 128 aa10.34□□□□□ -0.75
CHMP4BP1-201ENST00000556017 CLEC5AQ9NY25 188 aa10.34□□□□□ -0.75
CHMP4BP1-201ENST00000556017 RTL8CO15255 209 aa10.33□□□□□ -0.76
CHMP4BP1-201ENST00000556017 CLN5O75503 358 aa10.33□□□□□ -0.76
CHMP4BP1-201ENST00000556017 ZNF688P0C7X2 276 aa10.33□□□□□ -0.76
CHMP4BP1-201ENST00000556017 PI3P19957 117 aa10.33□□□□□ -0.76
CHMP4BP1-201ENST00000556017 ETV6P41212 452 aa10.33□□□□□ -0.76
CHMP4BP1-201ENST00000556017 P2RY1P47900 373 aa10.33□□□□□ -0.76
CHMP4BP1-201ENST00000556017 RND3P61587 244 aa10.33□□□□□ -0.76
CHMP4BP1-201ENST00000556017 LSM3P62310 102 aaKnown RBP10.33□□□□□ -0.76
CHMP4BP1-201ENST00000556017 C12orf74Q32Q52 190 aa10.33□□□□□ -0.76
CHMP4BP1-201ENST00000556017 KCTD21Q4G0X4 260 aa10.33□□□□□ -0.76
CHMP4BP1-201ENST00000556017 LPCAT3Q6P1A2 487 aa10.33□□□□□ -0.76
CHMP4BP1-201ENST00000556017 Q6ZRM9 215 aa10.33□□□□□ -0.76
CHMP4BP1-201ENST00000556017 OR4X1Q8NH49 305 aa10.33□□□□□ -0.76
CHMP4BP1-201ENST00000556017 RABAC1Q9UI14 185 aa10.33□□□□□ -0.76
CHMP4BP1-201ENST00000556017 TRAV10A0A0B4J240 114 aa10.32□□□□□ -0.76
CHMP4BP1-201ENST00000556017 M0QYG6 137 aa10.32□□□□□ -0.76
CHMP4BP1-201ENST00000556017 SPP1P10451 314 aa10.32□□□□□ -0.76
CHMP4BP1-201ENST00000556017 NPPCP23582 126 aa10.32□□□□□ -0.76
CHMP4BP1-201ENST00000556017 TSPAN5P62079 268 aa10.32□□□□□ -0.76
CHMP4BP1-201ENST00000556017 RPL11P62913 178 aaKnown RBP10.32□□□□□ -0.76
CHMP4BP1-201ENST00000556017 STXBP6Q8NFX7 210 aa10.32□□□□□ -0.76
CHMP4BP1-201ENST00000556017 RNF126Q9BV68 326 aa10.32□□□□□ -0.76
CHMP4BP1-201ENST00000556017 SCPEP1Q9HB40 452 aa10.32□□□□□ -0.76
CHMP4BP1-201ENST00000556017 AMBPP02760 352 aa10.31□□□□□ -0.76
CHMP4BP1-201ENST00000556017 ELK1P19419 428 aa10.31□□□□□ -0.76
CHMP4BP1-201ENST00000556017 TIGITQ495A1 244 aa10.31□□□□□ -0.76
CHMP4BP1-201ENST00000556017 AARDQ4LEZ3 155 aa10.31□□□□□ -0.76
CHMP4BP1-201ENST00000556017 TMEM41BQ5BJD5 291 aa10.31□□□□□ -0.76
CHMP4BP1-201ENST00000556017 MORN3Q6PF18 240 aaPredicted RBP10.31□□□□□ -0.76
CHMP4BP1-201ENST00000556017 ZNF767PQ75MW2 155 aa10.31□□□□□ -0.76
CHMP4BP1-201ENST00000556017 SNX29P2Q8IUI4 249 aa10.31□□□□□ -0.76
CHMP4BP1-201ENST00000556017 TMEM170AQ8WVE7 144 aa10.31□□□□□ -0.76
CHMP4BP1-201ENST00000556017 GLMPQ8WWB7 406 aa10.31□□□□□ -0.76
CHMP4BP1-201ENST00000556017 NACAE9PAV3 2078 aa10.3□□□□□ -0.76
CHMP4BP1-201ENST00000556017 APOA1P02647 267 aa10.3□□□□□ -0.76
CHMP4BP1-201ENST00000556017 RCVRNP35243 200 aa10.3□□□□□ -0.76
CHMP4BP1-201ENST00000556017 SNCAP37840 140 aa10.3□□□□□ -0.76
CHMP4BP1-201ENST00000556017 RPL5P46777 297 aaKnown RBP10.3□□□□□ -0.76
CHMP4BP1-201ENST00000556017 ACTL10Q5JWF8 245 aa10.3□□□□□ -0.76
CHMP4BP1-201ENST00000556017 C16orf54Q6UWD8 224 aa10.3□□□□□ -0.76
CHMP4BP1-201ENST00000556017 LINC00336Q6ZUF6 198 aa10.3□□□□□ -0.76
CHMP4BP1-201ENST00000556017 RAB40CQ96S21 281 aa10.3□□□□□ -0.76
CHMP4BP1-201ENST00000556017 Q9H521 79 aa10.3□□□□□ -0.76
CHMP4BP1-201ENST00000556017 TMEM231Q9H6L2 316 aa10.3□□□□□ -0.76
CHMP4BP1-201ENST00000556017 TBC1D24Q9ULP9 559 aa10.3□□□□□ -0.76
CHMP4BP1-201ENST00000556017 HSPG2P98160 4391 aa10.3□□□□□ -0.76
CHMP4BP1-201ENST00000556017 ABCA13Q86UQ4 5058 aa10.29□□□□□ -0.76
CHMP4BP1-201ENST00000556017 NXPH3O95157 252 aa10.29□□□□□ -0.76
CHMP4BP1-201ENST00000556017 IGLC1P0CG04 106 aa10.29□□□□□ -0.76
CHMP4BP1-201ENST00000556017 PIGPP57054 158 aa10.29□□□□□ -0.76
CHMP4BP1-201ENST00000556017 NCS1P62166 190 aa10.29□□□□□ -0.76
CHMP4BP1-201ENST00000556017 SP6Q3SY56 376 aa10.29□□□□□ -0.76
CHMP4BP1-201ENST00000556017 SLC35G3Q8N808 338 aa10.29□□□□□ -0.76
CHMP4BP1-201ENST00000556017 OR4D10Q8NGI6 311 aa10.29□□□□□ -0.76
CHMP4BP1-201ENST00000556017 LHFPL5Q8TAF8 219 aa10.29□□□□□ -0.76
CHMP4BP1-201ENST00000556017 ZNF486Q96H40 463 aaPredicted RBP10.29□□□□□ -0.76
CHMP4BP1-201ENST00000556017 METTL26Q96S19 204 aa10.29□□□□□ -0.76
CHMP4BP1-201ENST00000556017 COMMD3Q9UBI1 195 aa10.29□□□□□ -0.76
CHMP4BP1-201ENST00000556017 KLK11Q9UBX7 282 aa10.29□□□□□ -0.76
CHMP4BP1-201ENST00000556017 A0A1W2PS18 150 aa10.28□□□□□ -0.76
CHMP4BP1-201ENST00000556017 HPGDSO60760 199 aa10.28□□□□□ -0.76
CHMP4BP1-201ENST00000556017 IFNA17P01571 189 aa10.28□□□□□ -0.76
CHMP4BP1-201ENST00000556017 CD3DP04234 171 aa10.28□□□□□ -0.76
CHMP4BP1-201ENST00000556017 UCP1P25874 307 aa10.28□□□□□ -0.76
CHMP4BP1-201ENST00000556017 S100GP29377 79 aa10.28□□□□□ -0.76
CHMP4BP1-201ENST00000556017 USF2Q15853 346 aaPredicted RBP10.28□□□□□ -0.76
CHMP4BP1-201ENST00000556017 PRSS54Q6PEW0 395 aa10.28□□□□□ -0.76
CHMP4BP1-201ENST00000556017 KRTAP4-5Q9BYR2 181 aa10.28□□□□□ -0.76
CHMP4BP1-201ENST00000556017 DEFB131BA0A096LNP1 70 aa10.27□□□□□ -0.77
CHMP4BP1-201ENST00000556017 C3orf85A0A1B0GTC6 90 aa10.27□□□□□ -0.77
CHMP4BP1-201ENST00000556017 CORTO00230 105 aa10.27□□□□□ -0.77
CHMP4BP1-201ENST00000556017 MED14OSP0DP75 135 aa10.27□□□□□ -0.77
CHMP4BP1-201ENST00000556017 OPRK1P41145 380 aa10.27□□□□□ -0.77
CHMP4BP1-201ENST00000556017 AKR1C2P52895 323 aa10.27□□□□□ -0.77
CHMP4BP1-201ENST00000556017 PSMG4Q5JS54 123 aa10.27□□□□□ -0.77
CHMP4BP1-201ENST00000556017 POM121L12Q8N7R1 296 aa10.27□□□□□ -0.77
CHMP4BP1-201ENST00000556017 FAM90A26D6RGX4 464 aa10.26□□□□□ -0.77
CHMP4BP1-201ENST00000556017 H3BMM0 161 aa10.26□□□□□ -0.77
CHMP4BP1-201ENST00000556017 PGAM2P15259 253 aa10.26□□□□□ -0.77
CHMP4BP1-201ENST00000556017 HOXA1P49639 335 aaPredicted RBP10.26□□□□□ -0.77
CHMP4BP1-201ENST00000556017 DEFB1P60022 68 aa10.26□□□□□ -0.77
CHMP4BP1-201ENST00000556017 DHODHQ02127 395 aa10.26□□□□□ -0.77
CHMP4BP1-201ENST00000556017 DHRS2Q13268 280 aa10.26□□□□□ -0.77
CHMP4BP1-201ENST00000556017 RNASE12Q5GAN4 147 aaKnown RBP10.26□□□□□ -0.77
CHMP4BP1-201ENST00000556017 GDF5OSQ5U4N7 250 aa10.26□□□□□ -0.77
CHMP4BP1-201ENST00000556017 ZNF705AQ6ZN79 300 aaPredicted RBP10.26□□□□□ -0.77
CHMP4BP1-201ENST00000556017 OR52I2Q8NH67 350 aa10.26□□□□□ -0.77
CHMP4BP1-201ENST00000556017 TMEM230Q96A57 120 aa10.26□□□□□ -0.77
CHMP4BP1-201ENST00000556017 ABHD1Q96SE0 405 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms